BLASTX 7.6.2
Query= UN16908 /QuerySize=1767
(1766 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 P... 139 1e-031
sp|P32588|PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-... 110 4e-023
sp|P70318|TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus GN=Tial1 P... 106 7e-022
sp|P31483|TIA1_HUMAN Nucleolysin TIA-1 isoform p40 OS=Homo sapie... 64 2e-009
sp|P52912|TIA1_MOUSE Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 P... 64 2e-009
sp|Q99383|HRP1_YEAST Nuclear polyadenylated RNA-binding protein ... 63 7e-009
sp|Q13151|ROA0_HUMAN Heterogeneous nuclear ribonucleoprotein A0 ... 56 9e-007
sp|P39697|RT19_ARATH 40S ribosomal protein S19, mitochondrial OS... 54 4e-006
sp|Q03878|GRP1_DAUCA Glycine-rich RNA-binding protein OS=Daucus ... 53 6e-006
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O... 53 6e-006
sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Bra... 53 7e-006
sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitocho... 53 7e-006
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=... 53 7e-006
>sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1
Length = 375
Score = 139 bits (348), Expect = 1e-031
Identities = 64/140 (45%), Positives = 100/140 (71%), Gaps = 3/140 (2%)
Frame = -2
Query: 1525 RSVYAGNIHTQVTEVLLQEIFASTGPVESCKLIRKDKSS--YGFVHYFDRRSAGLAIMSL 1352
R++Y GN+ VTEVL+ ++F+ GP +SCK+I + S+ Y FV +++ R A A+ ++
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAM 68
Query: 1351 NGRHLFGRPIKVNWAYA-TGQREDTSSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARV 1175
NGR + G+ +KVNWA + Q++DTS+HF++FVGDLSP++T + +F+ F SDARV
Sbjct: 69 NGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARV 128
Query: 1174 MWDQKTGRSRGFGFVSFRNQ 1115
+ D TG+S+G+GFVSF N+
Sbjct: 129 VKDMATGKSKGYGFVSFYNK 148
>sp|P32588|PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-binding protein
PUB1 OS=Saccharomyces cerevisiae GN=PUB1 PE=1 SV=3
Length = 453
Score = 110 bits (274), Expect = 4e-023
Identities = 64/206 (31%), Positives = 111/206 (53%), Gaps = 8/206 (3%)
Frame = -2
Query: 1720 RETKQIFSISSRSEKKKDAESE-AQTAAAAATSNDAASFDATTPPPPQMEPLPSGNLPPG 1544
++ +Q ++ + S + A ++ + + A N + D P + P N G
Sbjct: 12 QQQQQPVAVETPSAVEAPASADPSSEQSVAVEGNSEQAEDNQGENDPSVVP---ANAITG 68
Query: 1543 FDPTTCRSVYAGNIHTQVTEVLLQEIFASTGPVESCKLI--RKDKS-SYGFVHYFDRRSA 1373
T+ R +Y GN+ +TE +L++ F GP+ + K++ + +K+ +Y FV Y A
Sbjct: 69 GRETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDA 128
Query: 1372 GLAIMSLNGRHLFGRPIKVNWAYATGQREDTSSHFNIFVGDLSPDVTDAALFESFSAFNT 1193
+A+ +LNG+ + +K+NWA+ + Q+ + FN+FVGDL+ +V D L +F F +
Sbjct: 129 NIALQTLNGKQIENNIVKINWAFQS-QQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPS 187
Query: 1192 CSDARVMWDQKTGRSRGFGFVSFRNQ 1115
VMWD +TG SRG+GFVSF +Q
Sbjct: 188 YLSGHVMWDMQTGSSRGYGFVSFTSQ 213
>sp|P70318|TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus GN=Tial1 PE=2 SV=1
Length = 392
Score = 106 bits (263), Expect = 7e-022
Identities = 47/99 (47%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
Frame = -2
Query: 1408 YGFVHYFDRRSAGLAIMSLNGRHLFGRPIKVNWAYA-TGQREDTSSHFNIFVGDLSPDVT 1232
Y FV +++ R A A+ ++NGR + G+ +KVNWA + Q++DTS+HF++FVGDLSP++T
Sbjct: 67 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 126
Query: 1231 DAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQ 1115
+ +F+ F SDARV+ D TG+S+G+GFVSF N+
Sbjct: 127 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNK 165
>sp|P31483|TIA1_HUMAN Nucleolysin TIA-1 isoform p40 OS=Homo sapiens GN=TIA1 PE=1
SV=3
Length = 386
Score = 64 bits (155), Expect = 2e-009
Identities = 28/56 (50%), Positives = 41/56 (73%)
Frame = -2
Query: 1282 TSSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQ 1115
+ HF++FVGDLSP++T + +F+ F SDARV+ D TG+S+G+GFVSF N+
Sbjct: 102 SQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNK 157
>sp|P52912|TIA1_MOUSE Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 PE=1 SV=1
Length = 386
Score = 64 bits (155), Expect = 2e-009
Identities = 28/56 (50%), Positives = 41/56 (73%)
Frame = -2
Query: 1282 TSSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQ 1115
+ HF++FVGDLSP++T + +F+ F SDARV+ D TG+S+G+GFVSF N+
Sbjct: 102 SQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNK 157
>sp|Q99383|HRP1_YEAST Nuclear polyadenylated RNA-binding protein 4
OS=Saccharomyces cerevisiae GN=HRP1 PE=1 SV=1
Length = 534
Score = 63 bits (151), Expect = 7e-009
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 12/163 (7%)
Frame = -2
Query: 1597 TPPPPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEVLLQEIFASTGPVESCKLIRKD 1418
+PP Q+ +C+ ++ G ++ TE L+E F G V K+++
Sbjct: 136 SPPQQQVTQTKEERSKADLSKESCK-MFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDP 194
Query: 1417 KS----SYGFVHYFDRRSAGLAIMSLNGRHLF-GRPIKVNWAYATGQREDTSSHFNIFVG 1253
+ +GF+ + S + + +H+ G+ I A +++ T IFVG
Sbjct: 195 ATGRSRGFGFLSFEKPSSVDEVVKT---QHILDGKVIDPKRAIPRDEQDKTG---KIFVG 248
Query: 1252 DLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSF 1124
+ PDV E FS + T DA++M D+ TG+SRGFGFV++
Sbjct: 249 GIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTY 291
>sp|Q13151|ROA0_HUMAN Heterogeneous nuclear ribonucleoprotein A0 OS=Homo sapiens
GN=HNRNPA0 PE=1 SV=1
Length = 305
Score = 56 bits (133), Expect = 9e-007
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Frame = -2
Query: 1423 KDKSSYGFVHYFDRRSAGLAIMSLNGRHLFGRPIKVNWAYATGQREDTSSHFNI---FVG 1253
K +GFV Y + A A M+ + + G +++ A + +H + FVG
Sbjct: 45 KRSRCFGFVTYSNVEEAD-AAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVG 103
Query: 1252 DLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRN 1118
L DV + L E FS F T A ++ D+++G+ RGFGFV F+N
Sbjct: 104 GLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQN 148
>sp|P39697|RT19_ARATH 40S ribosomal protein S19, mitochondrial OS=Arabidopsis
thaliana GN=RPS19 PE=1 SV=2
Length = 212
Score = 54 bits (127), Expect = 4e-006
Identities = 23/47 (48%), Positives = 37/47 (78%)
Frame = -2
Query: 1264 IFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSF 1124
+++G LSP + +L ++FS+FN ++ARVM ++ TGRSRG+GFV+F
Sbjct: 33 LYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNF 79
>sp|Q03878|GRP1_DAUCA Glycine-rich RNA-binding protein OS=Daucus carota PE=2
SV=1
Length = 157
Score = 53 bits (126), Expect = 6e-006
Identities = 22/56 (39%), Positives = 41/56 (73%)
Frame = -2
Query: 1270 FNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQMLK 1103
+ FVG L+ D +L ++FS F +D++++ D++TGRSRGFGFV+F++++ ++
Sbjct: 6 YRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMR 61
>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana
sylvestris PE=2 SV=1
Length = 291
Score = 53 bits (126), Expect = 6e-006
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = -2
Query: 1333 GRPIKVNWAYATGQREDTSSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTG 1154
GR ++ A G R SS+ ++VG+LS V D AL E FS DA+V++D+ +G
Sbjct: 187 GRDGNSSFGGARGGRSVDSSN-RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSG 245
Query: 1153 RSRGFGFVSFRNQQ 1112
RSRGFGFV++ + +
Sbjct: 246 RSRGFGFVTYSSSK 259
>sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Brassica napus
GN=GRP10 PE=2 SV=1
Length = 169
Score = 53 bits (125), Expect = 7e-006
Identities = 24/56 (42%), Positives = 39/56 (69%)
Frame = -2
Query: 1270 FNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQMLK 1103
+ FVG L+ DA L +FS F D++++ D++TGRSRGFGFV+F++++ +K
Sbjct: 6 YRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMK 61
>sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial
OS=Arabidopsis thaliana GN=GRP2 PE=1 SV=1
Length = 158
Score = 53 bits (125), Expect = 7e-006
Identities = 24/50 (48%), Positives = 37/50 (74%)
Frame = -2
Query: 1264 IFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQ 1115
+F+G LS DA+L ++F+ F DA+V+ D++TGRSRGFGFV+F ++
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDE 86
>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
plumbaginifolia PE=2 SV=1
Length = 292
Score = 53 bits (125), Expect = 7e-006
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = -2
Query: 1333 GRPIKVNWAYATGQREDTSSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTG 1154
GR ++ A G R SS+ ++VG+LS V D AL E FS DA+V++D+ +G
Sbjct: 188 GRDGNSSFGGARGGRSVDSSN-RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSG 246
Query: 1153 RSRGFGFVSF 1124
RSRGFGFV++
Sbjct: 247 RSRGFGFVTY 256
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,472,851,095
Number of Sequences: 518415
Number of Extensions: 69472851095
Number of Successful Extensions: 496854919
Number of sequences better than 0.0: 0
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