BLASTX 7.6.2
Query= UN16908 /QuerySize=1767
(1766 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G54080.2 | Symbols: UBP1A | oligouridylate-bin... 408 1e-113
TAIR9_protein||AT1G54080.1 | Symbols: UBP1A | oligouridylate-bin... 408 1e-113
TAIR9_protein||AT3G14100.1 | Symbols: | oligouridylate-binding ... 367 2e-101
TAIR9_protein||AT1G17370.1 | Symbols: UBP1B | UBP1B (oligouridyl... 324 1e-088
TAIR9_protein||AT1G17370.2 | Symbols: UBP1B | UBP1B (oligouridyl... 317 2e-086
TAIR9_protein||AT5G04280.1 | Symbols: | glycine-rich RNA-bindin... 58 2e-008
TAIR9_protein||AT5G47320.1 | Symbols: RPS19 | RPS19 (RIBOSOMAL P... 54 4e-007
TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR... 53 6e-007
TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 53 6e-007
TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 53 6e-007
TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 53 6e-007
TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-bindin... 52 8e-007
TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 52 1e-006
TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 52 1e-006
TAIR9_protein||AT3G04500.1 | Symbols: | RNA recognition motif (... 51 2e-006
>TAIR9_protein||AT1G54080.2 | Symbols: UBP1A | oligouridylate-binding protein,
putative | chr1:20183923-20186824 REVERSE
Length = 431
Score = 408 bits (1046), Expect = 1e-113
Identities = 201/230 (87%), Positives = 213/230 (92%), Gaps = 7/230 (3%)
Frame = -1
Query: 1112 DAQNAINEMNGKWLSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGREISISN 933
DAQ AINEMNGKW+SSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRE +SN
Sbjct: 205 DAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRE--LSN 262
Query: 932 EEAPENNPQYTTVYVGNLAPEVTQLDLHRLFHTLGAGVIEEVRVQRDKGFGFVRYNTHDE 753
E+APENNPQ+TTVYVGNL+PEVTQLDLHRLF+TLGAGVIEEVRVQRDKGFGFVRYNTHDE
Sbjct: 263 EDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGFGFVRYNTHDE 322
Query: 752 AALAIQMGNSQPFLFNRQIKCSWGNKPTPIGTASNPLPPPVPVAVPGLSPMDLLAYERQL 573
AALAIQMGN+QPFLF+RQI+CSWGNKPTP GTASNPLPPP P +VP LS MDLLAYERQL
Sbjct: 323 AALAIQMGNAQPFLFSRQIRCSWGNKPTPSGTASNPLPPPAPASVPSLSAMDLLAYERQL 382
Query: 572 ALAKMHPQAQHSLRH----VNAAGASAAAMYDGGFQNVAAAHQQLMYYQ* 435
ALAKMHPQAQHSLR VN AG + AAMYDGG+QNVAAAHQQLMYYQ*
Sbjct: 383 ALAKMHPQAQHSLRQAGLGVNVAGGT-AAMYDGGYQNVAAAHQQLMYYQ* 431
Score = 311 bits (796), Expect = 1e-084
Identities = 147/163 (90%), Positives = 157/163 (96%), Gaps = 4/163 (2%)
Frame = -2
Query: 1588 PPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEVLLQEIFASTGPVESCKLIRKDKSS 1409
PPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTE+LLQEIFASTGP+ESCKLIRKDKSS
Sbjct: 42 PPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRKDKSS 101
Query: 1408 YGFVHYFDRRSAGLAIMSLNGRHLFGRPIKVNWAYATGQREDTSSHFNIFVGDLSPDVTD 1229
YGFVHYFDRR A +AIM+LNGRH+FG+P+KVNWAYATGQREDTSSHFNIFVGDLSP+VTD
Sbjct: 102 YGFVHYFDRRCASMAIMTLNGRHIFGQPMKVNWAYATGQREDTSSHFNIFVGDLSPEVTD 161
Query: 1228 AALFESFSAFNTCS----DARVMWDQKTGRSRGFGFVSFRNQQ 1112
AALF+SFSAFN+CS DARVMWDQKTGRSRGFGFVSFRNQQ
Sbjct: 162 AALFDSFSAFNSCSSYYRDARVMWDQKTGRSRGFGFVSFRNQQ 204
>TAIR9_protein||AT1G54080.1 | Symbols: UBP1A | oligouridylate-binding protein,
putative | chr1:20183923-20186824 REVERSE
Length = 427
Score = 408 bits (1046), Expect = 1e-113
Identities = 201/230 (87%), Positives = 213/230 (92%), Gaps = 7/230 (3%)
Frame = -1
Query: 1112 DAQNAINEMNGKWLSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGREISISN 933
DAQ AINEMNGKW+SSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRE +SN
Sbjct: 201 DAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRE--LSN 258
Query: 932 EEAPENNPQYTTVYVGNLAPEVTQLDLHRLFHTLGAGVIEEVRVQRDKGFGFVRYNTHDE 753
E+APENNPQ+TTVYVGNL+PEVTQLDLHRLF+TLGAGVIEEVRVQRDKGFGFVRYNTHDE
Sbjct: 259 EDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGFGFVRYNTHDE 318
Query: 752 AALAIQMGNSQPFLFNRQIKCSWGNKPTPIGTASNPLPPPVPVAVPGLSPMDLLAYERQL 573
AALAIQMGN+QPFLF+RQI+CSWGNKPTP GTASNPLPPP P +VP LS MDLLAYERQL
Sbjct: 319 AALAIQMGNAQPFLFSRQIRCSWGNKPTPSGTASNPLPPPAPASVPSLSAMDLLAYERQL 378
Query: 572 ALAKMHPQAQHSLRH----VNAAGASAAAMYDGGFQNVAAAHQQLMYYQ* 435
ALAKMHPQAQHSLR VN AG + AAMYDGG+QNVAAAHQQLMYYQ*
Sbjct: 379 ALAKMHPQAQHSLRQAGLGVNVAGGT-AAMYDGGYQNVAAAHQQLMYYQ* 427
Score = 317 bits (811), Expect = 2e-086
Identities = 147/159 (92%), Positives = 157/159 (98%)
Frame = -2
Query: 1588 PPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEVLLQEIFASTGPVESCKLIRKDKSS 1409
PPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTE+LLQEIFASTGP+ESCKLIRKDKSS
Sbjct: 42 PPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRKDKSS 101
Query: 1408 YGFVHYFDRRSAGLAIMSLNGRHLFGRPIKVNWAYATGQREDTSSHFNIFVGDLSPDVTD 1229
YGFVHYFDRR A +AIM+LNGRH+FG+P+KVNWAYATGQREDTSSHFNIFVGDLSP+VTD
Sbjct: 102 YGFVHYFDRRCASMAIMTLNGRHIFGQPMKVNWAYATGQREDTSSHFNIFVGDLSPEVTD 161
Query: 1228 AALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQ 1112
AALF+SFSAFN+CSDARVMWDQKTGRSRGFGFVSFRNQQ
Sbjct: 162 AALFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFRNQQ 200
>TAIR9_protein||AT3G14100.1 | Symbols: | oligouridylate-binding protein,
putative | chr3:4673027-4675950 FORWARD
Length = 428
Score = 367 bits (941), Expect = 2e-101
Identities = 191/236 (80%), Positives = 199/236 (84%), Gaps = 14/236 (5%)
Frame = -1
Query: 1112 DAQNAINEMNGKWLSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGREISISN 933
DAQ AINEMNGKWLSSRQIRCNWATKGAT G+DK SSDGKSVVELT GSSEDG+E N
Sbjct: 197 DAQTAINEMNGKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDGKE--TLN 254
Query: 932 EEAPENNPQYTTVYVGNLAPEVTQLDLHRLFHTLGAGVIEEVRVQRDKGFGFVRYNTHDE 753
EE PENN Q+TTVYVGNLAPEVTQLDLHR FH LGAGVIEEVRVQRDKGFGFVRYNTH E
Sbjct: 255 EETPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFVRYNTHPE 314
Query: 752 AALAIQMGNSQPFLFNRQIKCSWGNKPTPIGTASNPLPPPVPVAVPGLSPMDLLAYERQL 573
AALAIQMGN+QP+LFNRQIKCSWGNKPTP GTASNPLPPP P VPGLS DLL YERQL
Sbjct: 315 AALAIQMGNTQPYLFNRQIKCSWGNKPTPPGTASNPLPPPAPAPVPGLSAADLLNYERQL 374
Query: 572 ALAK-------MHPQAQHSLRH---VNAAGASAAAMYDGGFQNVAAAHQQLMYYQ* 435
AL+K MH Q QH LR +NAAGA+ AAMYDGGFQNVAAA QQLMYYQ*
Sbjct: 375 ALSKMASVNALMHQQGQHPLRQAHGINAAGAT-AAMYDGGFQNVAAA-QQLMYYQ* 428
Score = 303 bits (775), Expect = 3e-082
Identities = 142/159 (89%), Positives = 152/159 (95%)
Frame = -2
Query: 1588 PPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEVLLQEIFASTGPVESCKLIRKDKSS 1409
PPQ+EP+PSGNLPPGFDP+TCRSVY GNIHTQVTE LLQEIF STGPVES KLIRKDKSS
Sbjct: 38 PPQLEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKDKSS 97
Query: 1408 YGFVHYFDRRSAGLAIMSLNGRHLFGRPIKVNWAYATGQREDTSSHFNIFVGDLSPDVTD 1229
YGFVHYFDRRSA LAI+SLNGRHLFG+PIKVNWAYATGQREDTSSHFNIFVGDLSP+VTD
Sbjct: 98 YGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTD 157
Query: 1228 AALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQ 1112
A L++SFS F++CSDARVMWDQKTGRSRGFGFVSFRNQQ
Sbjct: 158 ATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQ 196
>TAIR9_protein||AT1G17370.1 | Symbols: UBP1B | UBP1B (oligouridylate binding
protein 1B); mRNA 3'-UTR binding | chr1:5951842-5954825 REVERSE
Length = 420
Score = 324 bits (829), Expect = 1e-088
Identities = 165/236 (69%), Positives = 188/236 (79%), Gaps = 17/236 (7%)
Frame = -1
Query: 1112 DAQNAINEMNGKWLSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGREISISN 933
DAQ AI+E+ GKWL SRQIRCNWATKGAT GEDK SSD KSVVELT+G SEDG++ +N
Sbjct: 192 DAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGVSEDGKD--TTN 249
Query: 932 EEAPENNPQYTTVYVGNLAPEVTQLDLHRLFHTLGAGVIEEVRVQRDKGFGFVRYNTHDE 753
EAPENN QYTTVYVGNLAPEV+Q+DLHR FH+LGAGVIEEVRVQRDKGFGFVRY+TH E
Sbjct: 250 GEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHVE 309
Query: 752 AALAIQMGNSQPFLFNRQIKCSWGNKPTPIGTASNPLPPPVPVAVPGLSPMDLLAYERQL 573
AALAIQMGN+ +L RQ+KCSWG+KPTP GTASNPLPPP P +PG S DLLAYERQL
Sbjct: 310 AALAIQMGNTHSYLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSASDLLAYERQL 369
Query: 572 ALAKM--------HPQAQHSLRHVNAAGASAA--AMYDGGFQNVAAAHQQLMYYQ* 435
A++KM HPQ QH+ + A GA+ + A+YDGG+QN QQLMYYQ*
Sbjct: 370 AMSKMAGMNPMMHHPQGQHAFKQA-AMGATGSNQAIYDGGYQNA----QQLMYYQ* 420
Score = 302 bits (772), Expect = 6e-082
Identities = 143/190 (75%), Positives = 159/190 (83%)
Frame = -2
Query: 1681 EKKKDAESEAQTAAAAATSNDAASFDATTPPPPQMEPLPSGNLPPGFDPTTCRSVYAGNI 1502
++ K + + Q A + + PPQ+EP+PSGNLPPGFDP+TCRSVY GNI
Sbjct: 2 QRLKQQQQQQQVMMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNI 61
Query: 1501 HTQVTEVLLQEIFASTGPVESCKLIRKDKSSYGFVHYFDRRSAGLAIMSLNGRHLFGRPI 1322
H QVTE LLQE+FA TGPVESCKLIRK+KSSYGFVHYFDRRSAGLAI+SLNGRHLFG+PI
Sbjct: 62 HIQVTEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPI 121
Query: 1321 KVNWAYATGQREDTSSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRG 1142
KVNWAYA+GQREDTSSHFNIFVGDLSP+VTDA LF FS + TCSDARVMWDQKTGRSRG
Sbjct: 122 KVNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRG 181
Query: 1141 FGFVSFRNQQ 1112
FGFVSFRNQQ
Sbjct: 182 FGFVSFRNQQ 191
>TAIR9_protein||AT1G17370.2 | Symbols: UBP1B | UBP1B (oligouridylate binding
protein 1B); mRNA 3'-UTR binding | chr1:5951842-5954825 REVERSE
Length = 417
Score = 317 bits (810), Expect = 2e-086
Identities = 162/236 (68%), Positives = 184/236 (77%), Gaps = 20/236 (8%)
Frame = -1
Query: 1112 DAQNAINEMNGKWLSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGREISISN 933
DAQ AI+E+ GKWL SRQIRCNWATKGAT GEDK SSD KSVVELT+G +D +N
Sbjct: 192 DAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGDGKD-----TTN 246
Query: 932 EEAPENNPQYTTVYVGNLAPEVTQLDLHRLFHTLGAGVIEEVRVQRDKGFGFVRYNTHDE 753
EAPENN QYTTVYVGNLAPEV+Q+DLHR FH+LGAGVIEEVRVQRDKGFGFVRY+TH E
Sbjct: 247 GEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHVE 306
Query: 752 AALAIQMGNSQPFLFNRQIKCSWGNKPTPIGTASNPLPPPVPVAVPGLSPMDLLAYERQL 573
AALAIQMGN+ +L RQ+KCSWG+KPTP GTASNPLPPP P +PG S DLLAYERQL
Sbjct: 307 AALAIQMGNTHSYLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSASDLLAYERQL 366
Query: 572 ALAKM--------HPQAQHSLRHVNAAGASAA--AMYDGGFQNVAAAHQQLMYYQ* 435
A++KM HPQ QH+ + A GA+ + A+YDGG+QN QQLMYYQ*
Sbjct: 367 AMSKMAGMNPMMHHPQGQHAFKQA-AMGATGSNQAIYDGGYQNA----QQLMYYQ* 417
Score = 302 bits (772), Expect = 6e-082
Identities = 143/190 (75%), Positives = 159/190 (83%)
Frame = -2
Query: 1681 EKKKDAESEAQTAAAAATSNDAASFDATTPPPPQMEPLPSGNLPPGFDPTTCRSVYAGNI 1502
++ K + + Q A + + PPQ+EP+PSGNLPPGFDP+TCRSVY GNI
Sbjct: 2 QRLKQQQQQQQVMMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNI 61
Query: 1501 HTQVTEVLLQEIFASTGPVESCKLIRKDKSSYGFVHYFDRRSAGLAIMSLNGRHLFGRPI 1322
H QVTE LLQE+FA TGPVESCKLIRK+KSSYGFVHYFDRRSAGLAI+SLNGRHLFG+PI
Sbjct: 62 HIQVTEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPI 121
Query: 1321 KVNWAYATGQREDTSSHFNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRG 1142
KVNWAYA+GQREDTSSHFNIFVGDLSP+VTDA LF FS + TCSDARVMWDQKTGRSRG
Sbjct: 122 KVNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRG 181
Query: 1141 FGFVSFRNQQ 1112
FGFVSFRNQQ
Sbjct: 182 FGFVSFRNQQ 191
>TAIR9_protein||AT5G04280.1 | Symbols: | glycine-rich RNA-binding protein |
chr5:1192461-1195413 FORWARD
Length = 311
Score = 58 bits (138), Expect = 2e-008
Identities = 26/53 (49%), Positives = 38/53 (71%)
Frame = -2
Query: 1264 IFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQQML 1106
IFVG LSP+VTD L +FS F D ++M ++ TGRSRGFGF++F +++ +
Sbjct: 9 IFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRAM 61
>TAIR9_protein||AT5G47320.1 | Symbols: RPS19 | RPS19 (RIBOSOMAL PROTEIN S19);
RNA binding | chr5:19203801-19204951 FORWARD
Length = 213
Score = 54 bits (127), Expect = 4e-007
Identities = 23/47 (48%), Positives = 37/47 (78%)
Frame = -2
Query: 1264 IFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSF 1124
+++G LSP + +L ++FS+FN ++ARVM ++ TGRSRG+GFV+F
Sbjct: 33 LYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNF 79
>TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR-RBP2
(GLYCINE-RICH RNA-BINDING PROTEIN 2); ATP binding / RNA binding /
double-stranded DNA binding / single-stranded DNA binding |
chr4:8021314-8022065 FORWARD
Length = 159
Score = 53 bits (125), Expect = 6e-007
Identities = 24/50 (48%), Positives = 37/50 (74%)
Frame = -2
Query: 1264 IFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQ 1115
+F+G LS DA+L ++F+ F DA+V+ D++TGRSRGFGFV+F ++
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDE 86
>TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 154
Score = 53 bits (125), Expect = 6e-007
Identities = 24/50 (48%), Positives = 37/50 (74%)
Frame = -2
Query: 1264 IFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQ 1115
+F+G LS DA+L ++F+ F DA+V+ D++TGRSRGFGFV+F ++
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDE 86
>TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 145
Score = 53 bits (125), Expect = 6e-007
Identities = 24/50 (48%), Positives = 37/50 (74%)
Frame = -2
Query: 1264 IFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQ 1115
+F+G LS DA+L ++F+ F DA+V+ D++TGRSRGFGFV+F ++
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDE 86
>TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 130
Score = 53 bits (125), Expect = 6e-007
Identities = 24/50 (48%), Positives = 37/50 (74%)
Frame = -2
Query: 1264 IFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRNQ 1115
+F+G LS DA+L ++F+ F DA+V+ D++TGRSRGFGFV+F ++
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDE 86
>TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-binding protein,
putative | chr4:8022601-8023162 FORWARD
Length = 88
Score = 52 bits (124), Expect = 8e-007
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = -2
Query: 1264 IFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSF 1124
++VG+LSP TD L E+FS + DA VM D+ T RSRGFGFV++
Sbjct: 5 VYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTY 51
>TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 52 bits (122), Expect = 1e-006
Identities = 24/47 (51%), Positives = 36/47 (76%)
Frame = -2
Query: 1264 IFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSF 1124
+FVG LS D++L ++F++F ++A V+ D++TGRSRGFGFVSF
Sbjct: 37 LFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSF 83
>TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 52 bits (122), Expect = 1e-006
Identities = 24/47 (51%), Positives = 36/47 (76%)
Frame = -2
Query: 1264 IFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSF 1124
+FVG LS D++L ++F++F ++A V+ D++TGRSRGFGFVSF
Sbjct: 37 LFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSF 83
>TAIR9_protein||AT3G04500.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:1212065-1213795 REVERSE
Length = 246
Score = 51 bits (121), Expect = 2e-006
Identities = 22/51 (43%), Positives = 37/51 (72%)
Frame = -2
Query: 1270 FNIFVGDLSPDVTDAALFESFSAFNTCSDARVMWDQKTGRSRGFGFVSFRN 1118
+ +F GDL +V D L ++F+ F T + A+V+ D++TG+++G+GFVSF N
Sbjct: 137 YRLFCGDLGNEVNDDVLSKAFARFPTFNMAKVIRDKRTGKTKGYGFVSFLN 187
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,956,638,846
Number of Sequences: 33410
Number of Extensions: 8956638846
Number of Successful Extensions: 311844174
Number of sequences better than 0.0: 0
|
