BLASTX 7.6.2
Query= UN16980 /QuerySize=1237
(1236 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9LUG5|RPF2_ARATH Ribosome production factor 2 homolog OS=Ara... 415 4e-115
sp|Q9AWM9|RPF2_ORYSJ Ribosome production factor 2 homolog OS=Ory... 344 1e-093
sp|Q9H7B2|RPF2_HUMAN Ribosome production factor 2 homolog OS=Hom... 208 1e-052
sp|Q9JJ80|RPF2_MOUSE Ribosome production factor 2 homolog OS=Mus... 208 1e-052
sp|Q2YDN6|RPF2_BOVIN Ribosome production factor 2 homolog OS=Bos... 205 7e-052
sp|Q54DJ0|RPF2_DICDI Ribosome production factor 2 homolog OS=Dic... 166 5e-040
sp|Q9UUG1|RPF2_SCHPO Ribosome production factor 2 homolog OS=Sch... 154 2e-036
sp|Q9VEB3|RPF2_DROME Ribosome production factor 2 homolog OS=Dro... 153 3e-036
sp|Q9N3F0|RPF2_CAEEL Ribosome production factor 2 homolog OS=Cae... 143 3e-033
sp|P36160|RPF2_YEAST Ribosome biogenesis protein RPF2 OS=Sacchar... 134 1e-030
>sp|Q9LUG5|RPF2_ARATH Ribosome production factor 2 homolog OS=Arabidopsis
thaliana GN=At3g23620 PE=2 SV=1
Length = 314
Score = 415 bits (1066), Expect = 4e-115
Identities = 204/227 (89%), Positives = 216/227 (95%)
Frame = +2
Query: 104 MMEIRTPKTHKAKRVLEKRAPKLVENGKKTLILHGTKTSATVSSVLMELYRLKKGGAIKY 283
MMEIRTPKT KAKRVLE RAPKLVE GKKTLILHGTKTSAT+SSV+ ELYRLKKGGAI+Y
Sbjct: 1 MMEIRTPKTGKAKRVLESRAPKLVETGKKTLILHGTKTSATLSSVMTELYRLKKGGAIRY 60
Query: 284 SRRNENIRPFESGGETSLEFFSLKTDCSIFVYGSHTKKRPDNLVLGRMYDHHVYDLIEVG 463
SRRNENIRPFESGGETSLEFFS KTDCSIFVYGSHTKKRPDNLVLGRMYDH VYDLIEVG
Sbjct: 61 SRRNENIRPFESGGETSLEFFSQKTDCSIFVYGSHTKKRPDNLVLGRMYDHQVYDLIEVG 120
Query: 464 IENFKSLLSFSYDKKIAPHEGSKPFICFTGEGFDNVPELKQLKEVLTDLFRGEVVENLNL 643
IENFKSL +FSYDKK APHEG+KPFICF GEGF+NV ELK LKEVLTDLFRGEVV+NLNL
Sbjct: 121 IENFKSLRAFSYDKKFAPHEGTKPFICFIGEGFENVSELKHLKEVLTDLFRGEVVDNLNL 180
Query: 644 TGLDRAYICTAISPTKVFLTHCAIKLKKSGTIVPRIELVEVGPSMDL 784
TGLDRAY+C+AISPTKVFLTHCA+KLKKSG+IVPR+ELVEVGPSMDL
Sbjct: 181 TGLDRAYVCSAISPTKVFLTHCALKLKKSGSIVPRMELVEVGPSMDL 227
Score = 112 bits (280), Expect = 5e-024
Identities = 61/119 (51%), Positives = 82/119 (68%), Gaps = 2/119 (1%)
Frame = +3
Query: 690 RFFLLTALLSLKSQGPSCLG*SLLKLVHPWTWVIRRNRLPNEGLRKEAMRSSKDKPKKKV 869
+ FL L LK G L+++ VIRRNRLPN+ L KEAMR+SKDKPKKK
Sbjct: 196 KVFLTHCALKLKKSGSIVPRMELVEVGPSMDLVIRRNRLPNDSLMKEAMRTSKDKPKKKE 255
Query: 870 KNVDQNDVLGKLGRVYIPEQEVGKIPLADKSKGVKRERREGKLKKNKEEGSASKKLKES 1046
KNVDQ+ VLGK G++Y+P+Q++ ++ L DKSKG KRER++ KLK +E + +KK+K S
Sbjct: 256 KNVDQDAVLGKTGKIYMPDQKLKEMKLFDKSKGSKRERKDAKLKHKEE--TVAKKMKVS 312
>sp|Q9AWM9|RPF2_ORYSJ Ribosome production factor 2 homolog OS=Oryza sativa
subsp. japonica GN=Os01g0513800 PE=2 SV=1
Length = 310
Score = 344 bits (880), Expect = 1e-093
Identities = 161/224 (71%), Positives = 195/224 (87%)
Frame = +2
Query: 113 IRTPKTHKAKRVLEKRAPKLVENGKKTLILHGTKTSATVSSVLMELYRLKKGGAIKYSRR 292
IR P++ +AKR L K APKLVE GKKTLILHGTKTSA ++SVL +L+ LK+ A+KYS++
Sbjct: 5 IRVPRSQRAKRELLKHAPKLVETGKKTLILHGTKTSAVLNSVLADLFHLKRDNAVKYSKK 64
Query: 293 NENIRPFESGGETSLEFFSLKTDCSIFVYGSHTKKRPDNLVLGRMYDHHVYDLIEVGIEN 472
N+NIRPFESGGETSLEFFSLKTDCS+ VYGSH+KKRP+NLVLGR YDHH+YDL+EVG+EN
Sbjct: 65 NDNIRPFESGGETSLEFFSLKTDCSLIVYGSHSKKRPNNLVLGRTYDHHIYDLVEVGVEN 124
Query: 473 FKSLLSFSYDKKIAPHEGSKPFICFTGEGFDNVPELKQLKEVLTDLFRGEVVENLNLTGL 652
+KS+ S+ YDKK+AP GSKPF F GE F++V ELK LKEVL DLF+GEVVENLNL G+
Sbjct: 125 YKSIESYVYDKKLAPKLGSKPFFAFIGEHFESVEELKHLKEVLLDLFKGEVVENLNLAGV 184
Query: 653 DRAYICTAISPTKVFLTHCAIKLKKSGTIVPRIELVEVGPSMDL 784
DR ++CTAISPT V++ HCA++LK+SGT +PRIELVEVGPSMDL
Sbjct: 185 DRVFVCTAISPTTVYMMHCALRLKRSGTSIPRIELVEVGPSMDL 228
Score = 83 bits (203), Expect = 4e-015
Identities = 47/112 (41%), Positives = 71/112 (63%), Gaps = 4/112 (3%)
Frame = +3
Query: 696 FLLTALLSLKSQGPSCLG*SLLKLVHPWTWVIRRNRLPNEGLRKEAMRSSKDKPKKKVKN 875
+++ L LK G S L+++ V+RR+R P E L+KEAM+++ KK+KN
Sbjct: 199 YMMHCALRLKRSGTSIPRIELVEVGPSMDLVVRRHRYPVESLKKEAMKTADH--AKKMKN 256
Query: 876 VDQNDVLGKLGRVYIPEQEVGKIPLADKSKGVKRERREGKLKKNKEEGSASK 1031
V ++ V GKLG+VYIP+Q++ K+ L++ KG+KRERRE KKNK+ K
Sbjct: 257 VTKDPVHGKLGKVYIPDQQIAKMSLSNDVKGLKRERREA--KKNKDHSKKQK 306
>sp|Q9H7B2|RPF2_HUMAN Ribosome production factor 2 homolog OS=Homo sapiens
GN=RPF2 PE=1 SV=2
Length = 306
Score = 208 bits (527), Expect = 1e-052
Identities = 112/221 (50%), Positives = 149/221 (67%), Gaps = 7/221 (3%)
Frame = +2
Query: 122 PKTHKAKRVLEKRAPKLVENGKKTLILHGTKTSATVSSVLMELYRLKKGGAIKYSRRNEN 301
PKT +AKR LEKR PKL EN K +++ G +ATV+ VL ++Y LKK + Y ++N
Sbjct: 10 PKTKRAKRFLEKREPKLNENIKNAMLIKGGNANATVTKVLKDVYALKKPYGVLYKKKNIT 69
Query: 302 IRPFESGGETSLEFFSLKTDCSIFVYGSHTKKRPDNLVLGRMYDHHVYDLIEVGIENFKS 481
RPFE +TSLEFFS K+DCS+F++GSH KKRP+NLV+GRMYD+HV D+IE+GIENF S
Sbjct: 70 -RPFED--QTSLEFFSKKSDCSLFMFGSHNKKRPNNLVIGRMYDYHVLDMIELGIENFVS 126
Query: 482 LLSFSYDKKIAPHEGSKPFICFTGEGFDNVPELKQLKEVLTDLFRGEVVENLNLTGLDRA 661
L K P EG+KP + F G+ FD + ++LK +L D FRG V N+ L GL+
Sbjct: 127 LKDIKNSK--CP-EGTKPMLIFAGDDFDVTEDYRRLKSLLIDFFRGPTVSNIRLAGLEYV 183
Query: 662 YICTAISPTKVFLTHCAIKLKKSGTIVPRIELVEVGPSMDL 784
TA++ K++ + LKKSG PRIEL E+GPS+DL
Sbjct: 184 LHFTALN-GKIYFRSYKLLLKKSGCRTPRIELEEMGPSLDL 223
>sp|Q9JJ80|RPF2_MOUSE Ribosome production factor 2 homolog OS=Mus musculus
GN=Rpf2 PE=2 SV=2
Length = 306
Score = 208 bits (527), Expect = 1e-052
Identities = 112/225 (49%), Positives = 150/225 (66%), Gaps = 7/225 (3%)
Frame = +2
Query: 110 EIRTPKTHKAKRVLEKRAPKLVENGKKTLILHGTKTSATVSSVLMELYRLKKGGAIKYSR 289
++ PKT +AKR LEKR PKL EN K +++ G +ATV+ VL ++Y LKK + Y +
Sbjct: 6 KVLKPKTKRAKRFLEKREPKLTENIKNAMLIKGGNANATVTQVLRDMYALKKPYGVLYKK 65
Query: 290 RNENIRPFESGGETSLEFFSLKTDCSIFVYGSHTKKRPDNLVLGRMYDHHVYDLIEVGIE 469
+N RPFE +TSLEFFS K+DCS+F++GSH KKRP+NLV+GRMYD+HV D+IE+GIE
Sbjct: 66 KNIT-RPFED--QTSLEFFSKKSDCSLFMFGSHNKKRPNNLVIGRMYDYHVLDMIELGIE 122
Query: 470 NFKSLLSFSYDKKIAPHEGSKPFICFTGEGFDNVPELKQLKEVLTDLFRGEVVENLNLTG 649
F SL K P EG+KP + F G+ FD + ++LK +L D FRG V N+ L G
Sbjct: 123 KFVSLKDIKTSK--CP-EGTKPMLIFAGDDFDVTEDFRRLKNLLIDFFRGPTVSNVRLAG 179
Query: 650 LDRAYICTAISPTKVFLTHCAIKLKKSGTIVPRIELVEVGPSMDL 784
L+ TA++ KV+ + LKKSG PRIEL E+GPS+DL
Sbjct: 180 LEYVLHFTALN-GKVYFRSYKLLLKKSGCRTPRIELEEMGPSLDL 223
>sp|Q2YDN6|RPF2_BOVIN Ribosome production factor 2 homolog OS=Bos taurus GN=RPF2
PE=2 SV=1
Length = 306
Score = 205 bits (520), Expect = 7e-052
Identities = 111/221 (50%), Positives = 148/221 (66%), Gaps = 7/221 (3%)
Frame = +2
Query: 122 PKTHKAKRVLEKRAPKLVENGKKTLILHGTKTSATVSSVLMELYRLKKGGAIKYSRRNEN 301
PKT +AKR LEKR PKL EN K +++ G ++TV+ VL ++Y LKK I Y ++N
Sbjct: 10 PKTKRAKRFLEKREPKLSENIKNAMLIKGGNANSTVTQVLRDVYALKKPYGILYKKKNIT 69
Query: 302 IRPFESGGETSLEFFSLKTDCSIFVYGSHTKKRPDNLVLGRMYDHHVYDLIEVGIENFKS 481
RPFE +TSLEFFS K+DCS+F++GSH KKRP+NLV+GRMYD+HV D+IE+GIE F S
Sbjct: 70 -RPFED--QTSLEFFSKKSDCSLFMFGSHNKKRPNNLVIGRMYDYHVLDIIELGIEKFVS 126
Query: 482 LLSFSYDKKIAPHEGSKPFICFTGEGFDNVPELKQLKEVLTDLFRGEVVENLNLTGLDRA 661
L K P EG+KP + F G+ FD + ++LK +L D FRG V N+ L GL+
Sbjct: 127 LKDIKNSK--CP-EGTKPMLIFAGDDFDVTEDYRRLKSLLIDFFRGPTVSNIRLAGLEYV 183
Query: 662 YICTAISPTKVFLTHCAIKLKKSGTIVPRIELVEVGPSMDL 784
TA++ K++ + LKKSG PRIEL E+GPS+DL
Sbjct: 184 LHFTALN-GKIYFRSYKLLLKKSGCRTPRIELEEMGPSLDL 223
>sp|Q54DJ0|RPF2_DICDI Ribosome production factor 2 homolog OS=Dictyostelium
discoideum GN=bxdc1 PE=3 SV=1
Length = 307
Score = 166 bits (418), Expect = 5e-040
Identities = 90/232 (38%), Positives = 139/232 (59%), Gaps = 8/232 (3%)
Frame = +2
Query: 92 KPPVMMEIRTP-KTHKAKRVLEKRAPKLVENGKKTLILHGTKTSATVSSVLMELYRLKKG 268
KP + R P K+H AK+ L + K VE K+ + + G ++S + + +L+ LKK
Sbjct: 4 KPKKIFLKREPSKSHAAKKFLRNKEAKEVEIVKQAMFIRGQQSSDIIQKLQKDLFMLKKP 63
Query: 269 GAIKYSRRNENIRPFESGGETSLEFFSLKTDCSIFVYGSHTKKRPDNLVLGRMYDHHVYD 448
AI+Y+++N RP ES S+EF K++ S+F +GSH+KKR NL++GR++D+ V+D
Sbjct: 64 EAIQYNKKNA-FRPMESA--ESIEFLGEKSNSSLFTFGSHSKKREHNLIMGRLFDNAVFD 120
Query: 449 LIEVGIENFKSLLSFSYDKKIAPHEGSKPFICFTGEGFDNVPELKQLKEVLTDLFRGEVV 628
+IE+GI NFKS+ F D G+KP F G F+N +K++ + D+FRG +V
Sbjct: 121 MIEMGISNFKSIKEFGADGSAV---GNKPMFIFQGNEFENNETVKKVGNLFLDMFRGRLV 177
Query: 629 ENLNLTGLDRAYICTAISPTKVFLTHCAIKLKKSGTIVPRIELVEVGPSMDL 784
E +NL GLD I TA+ K+ H SG+ +P+++L EVGPS D+
Sbjct: 178 EYINLVGLDHVVIMTAVD-DKILFRHYTTIFSPSGSKIPKVDLKEVGPSFDI 228
>sp|Q9UUG1|RPF2_SCHPO Ribosome production factor 2 homolog
OS=Schizosaccharomyces pombe GN=SPAC926.08c PE=1 SV=1
Length = 317
Score = 154 bits (387), Expect = 2e-036
Identities = 93/228 (40%), Positives = 131/228 (57%), Gaps = 14/228 (6%)
Frame = +2
Query: 122 PKTHKAKRVLEKRAPKLVENGKKTLILHGTKTSATVSSVLMELYRLKKGGAIKYSRRNEN 301
PK + KR LEKR PKLVE K + L G TS VL +++ LKK ++ + ++N N
Sbjct: 7 PKNARTKRALEKREPKLVEGAKTAIFLRGNATSQISLDVLGDIHALKKPFSVNFQKKN-N 65
Query: 302 IRPFESGGETSLEFFSLKTDCSIFVYGSHTKKRPDNLVLGRMYDHHVYDLIEVGIENFKS 481
I PFE +SLEFFS K D ++ V +H KKRP NL R +++ V D+IE+GI N+KS
Sbjct: 66 ILPFEDA--SSLEFFSEKNDAALAVMATHNKKRPHNLTWVRFFNYRVLDMIELGIVNYKS 123
Query: 482 LLSFSYDKKIAPHEGSKPFICFTGEGFDNVPELKQLKEVLTDLFRGEVVENLNLTGLDRA 661
+ SFS I P G+KP I F G FD P + +K + D FRGE ++ L+ GL
Sbjct: 124 IQSFS-ATPIVP--GTKPMILFQGPVFDAHPTYRHIKSLFLDFFRGEPIQKLDSAGLSYV 180
Query: 662 YICTAISPTK-----VFLTHCAI---KLKKSGTIVPRIELVEVGPSMD 781
+ +A + + L H + KL K+ T +PR+EL E+GP +D
Sbjct: 181 IVVSAAEAQEDETKPLPLVHFRVYGTKLLKTKTNLPRVELEEMGPRID 228
>sp|Q9VEB3|RPF2_DROME Ribosome production factor 2 homolog OS=Drosophila
melanogaster GN=CG7993 PE=2 SV=3
Length = 320
Score = 153 bits (385), Expect = 3e-036
Identities = 83/225 (36%), Positives = 130/225 (57%), Gaps = 6/225 (2%)
Frame = +2
Query: 107 MEIRTPKTHKAKRVLEKRAPKLVENGKKTLILHGTKTSATVSSVLMELYRLKKGGAIKYS 286
+ IR PKT K K+VL R P+L+E+ + L L G K V + +L LKK +K
Sbjct: 4 LRIRKPKTRKGKKVLLAREPQLIESARTMLFLDGRKCGGNVKLCMKDLQALKK-PLVKVL 62
Query: 287 RRNENIRPFESGGETSLEFFSLKTDCSIFVYGSHTKKRPDNLVLGRMYDHHVYDLIEVGI 466
R +I PF+ +SLEF ++K D ++F +GS +KKRPDN++LGR++++ V D+ E+GI
Sbjct: 63 NRKNDITPFDD--PSSLEFLTMKNDAALFTFGSTSKKRPDNIILGRIFENEVLDMFELGI 120
Query: 467 ENFKSLLSFSYDKKIAPHEGSKPFICFTGEGFDNVPELKQLKEVLTDLFRGEVVENLNLT 646
+ ++++ F +K A KP + F G + EL++L+ + D F+ E V+++ L
Sbjct: 121 KRYQAISEFKNEKIGA---CVKPCLVFNGPKWAQTEELRRLRNLFIDTFQREKVDSIRLQ 177
Query: 647 GLDRAYICTAISPTKVFLTHCAIKLKKSGTIVPRIELVEVGPSMD 781
G++ T + + I LKKSG PRIEL E+GPS D
Sbjct: 178 GIEHVLSFTVTDDMNILMRSYRILLKKSGQRTPRIELEEIGPSAD 222
>sp|Q9N3F0|RPF2_CAEEL Ribosome production factor 2 homolog OS=Caenorhabditis
elegans GN=Y54E10A.10 PE=2 SV=1
Length = 297
Score = 143 bits (359), Expect = 3e-033
Identities = 85/225 (37%), Positives = 124/225 (55%), Gaps = 6/225 (2%)
Frame = +2
Query: 104 MMEIRTPKTHKAKRVLEKRAPKLVENGKKTLILHGTKTSATVSSVLMELYRLKKGGAIKY 283
M+ + KT K KRVL RA K VEN KK L G KT+ +S +M+L+ +KK K
Sbjct: 1 MVRVEKIKTKKGKRVLVNRASKTVENDKKALFCRGAKTNEIISHAMMDLFDMKKPLTTKM 60
Query: 284 SRRNENIRPFESGGETSLEFFSLKTDCSIFVYGSHTKKRPDNLVLGRMYDHHVYDLIEVG 463
+ N FE ET + K D S+FV GS++KK+P+ L GR YD + D+ E+
Sbjct: 61 DKHNP-YHLFED--ETPIVRAGSKFDTSLFVLGSNSKKKPNCLTFGRTYDGQLLDMAELR 117
Query: 464 IENFKSLLSFSYDKKIAPHEGSKPFICFTGEGFDNVPELKQLKEVLTDLFRGEVVENLNL 643
I ++KS +F K GSKP + G F++ ++K++ ++ D FRG V+ + L
Sbjct: 118 ITSYKSSSNFEAAKMTL---GSKPCVILEGAAFESDGDMKRIGNLMVDWFRGPKVDTVRL 174
Query: 644 TGLDRAYICTAISPTKVFLTHCAIKLKKSGTIVPRIELVEVGPSM 778
GL+ + TA+ T + L LKKS T PR+EL E+GPS+
Sbjct: 175 EGLETVIVFTALDETNLALRVYRPMLKKSATATPRVELAEMGPSI 219
>sp|P36160|RPF2_YEAST Ribosome biogenesis protein RPF2 OS=Saccharomyces
cerevisiae GN=RPF2 PE=1 SV=1
Length = 344
Score = 134 bits (337), Expect = 1e-030
Identities = 86/237 (36%), Positives = 127/237 (53%), Gaps = 17/237 (7%)
Frame = +2
Query: 104 MMEIRTPKTHKAKRVLEKRAPKLVENGKKTLILHGTKTSATVSSVLMELYRLKKGGAIKY 283
M+ PK +AKR L KR KLVEN K+ L + G + + ++++L LKK ++
Sbjct: 1 MIRTVKPKNARAKRALVKREAKLVENVKQALFIPGQSCNKNLHDIMVDLSALKKPDMKRF 60
Query: 284 SRRNENIRPFESGGETSLEFFSLKTDCSIFVYGSHTKKRPDNLVLGRMYDHHVYDLIEVG 463
+R+N+ I PFE + LEFFS K DCS+ V + +KKR +N+ R + + +YD+IE+
Sbjct: 61 NRKND-IHPFED--MSPLEFFSEKNDCSLMVLMTSSKKRKNNMTFIRTFGYKIYDMIELM 117
Query: 464 I-ENFKSLLSFSYDKKIAPHEGSKPFICFTGEGFDNVPELKQLKEVLTDLFRGEVVENLN 640
+ +NFK L F KK+ G KP F G FD P KQ+K + D FRGE + +
Sbjct: 118 VADNFKLLSDF---KKLTFTVGLKPMFTFQGAAFDTHPVYKQIKSLFLDFFRGESTDLQD 174
Query: 641 LTGLDRAYICTAIS--------PTKVFLTH--CAIKLKKSGTIVPRIELVEVGPSMD 781
+ GL T P +F + + K + G +PRIELVE+GP +D
Sbjct: 175 VAGLQHVISMTIQGDFQDGEPLPNVLFRVYKLKSYKSDQGGKRLPRIELVEIGPRLD 231
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,472,851,095
Number of Sequences: 518415
Number of Extensions: 69472851095
Number of Successful Extensions: 496854919
Number of sequences better than 0.0: 0
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