BLASTX 7.6.2
Query= UN16992 /QuerySize=1110
(1109 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G53120.1 | Symbols: | RNA-binding S4 domain-c... 523 9e-149
>TAIR9_protein||AT1G53120.1 | Symbols: | RNA-binding S4 domain-containing
protein | chr1:19792798-19794605 FORWARD
Length = 321
Score = 523 bits (1346), Expect = 9e-149
Identities = 273/324 (84%), Positives = 294/324 (90%), Gaps = 6/324 (1%)
Frame = -3
Query: 1101 MAVTSLAPPWLVLRQAFRGTVAASSSYLHTTYKPLITN---HPSSPLRHSALRRCHVAKA 931
MAVTSLAPPW++LR AFR A+SS LHT K LITN S PLR SALRRC+ A+A
Sbjct: 1 MAVTSLAPPWVILRLAFRS--VAASSCLHTNQKTLITNLSIPTSFPLRQSALRRCYSAEA 58
Query: 930 MKGDVELLLKGVVGDQSVAKEVKHILEMARRATSRREVLHTDFLTPPVVKESVSVLGKLA 751
+KGDV+ LLKG VGDQ+VAKEVK ILEMARRA+S+REVLHTDFLTPP+VKESVS+L K A
Sbjct: 59 IKGDVDFLLKG-VGDQAVAKEVKQILEMARRASSKREVLHTDFLTPPIVKESVSLLEKFA 117
Query: 750 DVAVVAQGGYPEAERCRISVGHPDALTNDPDIVAALSITGNFGLQACSHGDFLGAILGTG 571
DV +VAQGGYPEAERCRIS+GHPD LT+DPDIVAALSITGNFG Q CSHGDFLGAILGTG
Sbjct: 118 DVKIVAQGGYPEAERCRISIGHPDVLTSDPDIVAALSITGNFGFQPCSHGDFLGAILGTG 177
Query: 570 ITRDKLGDILIQEEKGAQVLIVPELVDFIVSALDKVGNVSVTCSKIPLLALEYEPPRTNT 391
I+R+KLGDILIQEEKGAQVLIVPELVDF+V+ALDKVGNV VTCSKIPLLALEYEPPRTN+
Sbjct: 178 ISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYEPPRTNS 237
Query: 390 FKTIEASLRIDAVASAGFKISRSKLVDLISSGDVRVNWATVTKNGTTVKTGDVVSVSGKG 211
FKT+EASLRIDAVASAGFKISRSKLVDLISS DVRVNWATVTKNGT VKTGDVVSVSGKG
Sbjct: 238 FKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDVVSVSGKG 297
Query: 210 RLKIGEINETKKGKFAVEIIRYL* 139
RLKIGEINETKKGKFAVEIIRYL*
Sbjct: 298 RLKIGEINETKKGKFAVEIIRYL* 321
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,999,982,957
Number of Sequences: 33410
Number of Extensions: 8999982957
Number of Successful Extensions: 311858316
Number of sequences better than 0.0: 0
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