Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN17017


BLASTX 7.6.2

Query= UN17017 /QuerySize=2145
        (2144 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT4G27690.1 | Symbols: VPS26B | VPS26B (VACUOLAR ...    544   1e-154
TAIR9_protein||AT4G27690.2 | Symbols: VPS26B | VPS26B (VACUOLAR ...    521   1e-147
TAIR9_protein||AT5G53530.1 | Symbols: VPS26A | VPS26A (VACUOLAR ...    520   2e-147
TAIR9_protein||AT4G27700.1 | Symbols:  | rhodanese-like domain-c...    386   4e-107
TAIR9_protein||AT3G08920.1 | Symbols:  | rhodanese-like domain-c...     54   3e-007

>TAIR9_protein||AT4G27690.1 | Symbols: VPS26B | VPS26B (VACUOLAR PROTEIN SORTING
        26B) | chr4:13824019-13826235 FORWARD

          Length = 304

 Score =  544 bits (1399), Expect = 1e-154
 Identities = 267/286 (93%), Positives = 276/286 (96%)
 Frame = +2

Query:   2 FSDGKNRKQVPMKKENGQTALVPLFQSQETFSGKVCIEPYQEKKVEHNGVKVELLGQIEM 181
           FSDGKNRKQVPMKKENGQTALVPLF SQ+T SGKVCIEPYQ KKVEHNGVKVELLGQIEM
Sbjct:  18 FSDGKNRKQVPMKKENGQTALVPLFHSQDTISGKVCIEPYQGKKVEHNGVKVELLGQIEM 77

Query: 182 YFDRGNFYDFTSLVRELDVPGDIYERKTYPFEFPTVEMPYDTYNGVNVRLRDVLKVTVTR 361
           YFDRGNFYDFTSLVRELDVPG+IYERKTYPFEFPTVEMPY+TYNGVNVRLR VLKVTVTR
Sbjct:  78 YFDRGNFYDFTSLVRELDVPGEIYERKTYPFEFPTVEMPYETYNGVNVRLRYVLKVTVTR 137

Query: 362 GYSGSIVEYQEFMVRNYAPPPPINNSIKMEVGIEDCLHIEFEYNKSKYHLKDVILGKIYF 541
           GY+GSI+EYQE +VRNYAP P INNSIKMEVGIEDCLHIEFEYNKSKYHLKDVILGKIYF
Sbjct: 138 GYAGSILEYQELVVRNYAPLPDINNSIKMEVGIEDCLHIEFEYNKSKYHLKDVILGKIYF 197

Query: 542 LLVRVKMKNMDLEIRRWESTGAGANTHVETETLAEFELMDGTPVRGESIPVRLFLAPYDL 721
           LLVR+KMKNMDLEIRR ESTGAGANTHVETETLA+FELMDGTPVRGESIPVRLFLAPYDL
Sbjct: 198 LLVRIKMKNMDLEIRRRESTGAGANTHVETETLAKFELMDGTPVRGESIPVRLFLAPYDL 257

Query: 722 TPTHRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITLYRLKADTSA 859
           TPTHRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITLYRLK D S+
Sbjct: 258 TPTHRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITLYRLKEDASS 303

>TAIR9_protein||AT4G27690.2 | Symbols: VPS26B | VPS26B (VACUOLAR PROTEIN SORTING
        26B) | chr4:13824324-13826235 FORWARD

          Length = 276

 Score =  521 bits (1340), Expect = 1e-147
 Identities = 256/275 (93%), Positives = 265/275 (96%)
 Frame = +2

Query:  35 MKKENGQTALVPLFQSQETFSGKVCIEPYQEKKVEHNGVKVELLGQIEMYFDRGNFYDFT 214
           MKKENGQTALVPLF SQ+T SGKVCIEPYQ KKVEHNGVKVELLGQIEMYFDRGNFYDFT
Sbjct:   1 MKKENGQTALVPLFHSQDTISGKVCIEPYQGKKVEHNGVKVELLGQIEMYFDRGNFYDFT 60

Query: 215 SLVRELDVPGDIYERKTYPFEFPTVEMPYDTYNGVNVRLRDVLKVTVTRGYSGSIVEYQE 394
           SLVRELDVPG+IYERKTYPFEFPTVEMPY+TYNGVNVRLR VLKVTVTRGY+GSI+EYQE
Sbjct:  61 SLVRELDVPGEIYERKTYPFEFPTVEMPYETYNGVNVRLRYVLKVTVTRGYAGSILEYQE 120

Query: 395 FMVRNYAPPPPINNSIKMEVGIEDCLHIEFEYNKSKYHLKDVILGKIYFLLVRVKMKNMD 574
            +VRNYAP P INNSIKMEVGIEDCLHIEFEYNKSKYHLKDVILGKIYFLLVR+KMKNMD
Sbjct: 121 LVVRNYAPLPDINNSIKMEVGIEDCLHIEFEYNKSKYHLKDVILGKIYFLLVRIKMKNMD 180

Query: 575 LEIRRWESTGAGANTHVETETLAEFELMDGTPVRGESIPVRLFLAPYDLTPTHRNINNKF 754
           LEIRR ESTGAGANTHVETETLA+FELMDGTPVRGESIPVRLFLAPYDLTPTHRNINNKF
Sbjct: 181 LEIRRRESTGAGANTHVETETLAKFELMDGTPVRGESIPVRLFLAPYDLTPTHRNINNKF 240

Query: 755 SVKYYLNLVLVDEEDRRYFKQQEITLYRLKADTSA 859
           SVKYYLNLVLVDEEDRRYFKQQEITLYRLK D S+
Sbjct: 241 SVKYYLNLVLVDEEDRRYFKQQEITLYRLKEDASS 275

>TAIR9_protein||AT5G53530.1 | Symbols: VPS26A | VPS26A (VACUOLAR PROTEIN SORTING
        26A) | chr5:21746275-21748156 REVERSE

          Length = 303

 Score =  520 bits (1337), Expect = 2e-147
 Identities = 252/285 (88%), Positives = 270/285 (94%)
 Frame = +2

Query:   2 FSDGKNRKQVPMKKENGQTALVPLFQSQETFSGKVCIEPYQEKKVEHNGVKVELLGQIEM 181
           F+DGKNRKQVP KK+NGQ  + PLFQSQET +GK+ IEPYQ KKVEHNGVKVELLGQIEM
Sbjct:  18 FTDGKNRKQVPTKKDNGQIVMNPLFQSQETIAGKINIEPYQGKKVEHNGVKVELLGQIEM 77

Query: 182 YFDRGNFYDFTSLVRELDVPGDIYERKTYPFEFPTVEMPYDTYNGVNVRLRDVLKVTVTR 361
           YFDRGNFYDFTSLVRE+DVPG+IYERKTYPFEF +VEMPY+TYNGVNVRLR VLKVTVTR
Sbjct:  78 YFDRGNFYDFTSLVREIDVPGEIYERKTYPFEFSSVEMPYETYNGVNVRLRYVLKVTVTR 137

Query: 362 GYSGSIVEYQEFMVRNYAPPPPINNSIKMEVGIEDCLHIEFEYNKSKYHLKDVILGKIYF 541
           GY+GSIVEYQ+F+VRNY P PPINNSIKMEVGIEDCLHIEFEYNKSKYHLKDVILGKIYF
Sbjct: 138 GYAGSIVEYQDFVVRNYVPLPPINNSIKMEVGIEDCLHIEFEYNKSKYHLKDVILGKIYF 197

Query: 542 LLVRVKMKNMDLEIRRWESTGAGANTHVETETLAEFELMDGTPVRGESIPVRLFLAPYDL 721
           LLVR+K+KNMDLEIRR ESTGAGANTHVETETLA+FELMDG PVRGESIPVR+FL PYDL
Sbjct: 198 LLVRIKIKNMDLEIRRRESTGAGANTHVETETLAKFELMDGAPVRGESIPVRVFLTPYDL 257

Query: 722 TPTHRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITLYRLKADTS 856
           TPTH+NINNKFSVKYYLNLVLVDEEDRRYFKQQEITLYRLK +TS
Sbjct: 258 TPTHKNINNKFSVKYYLNLVLVDEEDRRYFKQQEITLYRLKEETS 302

>TAIR9_protein||AT4G27700.1 | Symbols:  | rhodanese-like domain-containing
        protein | chr4:13826541-13827673 REVERSE

          Length = 225

 Score =  386 bits (990), Expect = 4e-107
 Identities = 199/230 (86%), Positives = 207/230 (90%), Gaps = 6/230 (2%)
 Frame = -3

Query: 1806 MASLTSIATPYRSSSYPSSSQALRVKLAGNTLFSAGVRSPASSSSSSLLTIRSAATKPDK 1627
            MASLTSIATP     YPSSSQALR+K +GNTLFSAGVRS A  S    L I+  +TKP K
Sbjct:    1 MASLTSIATP-----YPSSSQALRLKSSGNTLFSAGVRSAAMVSGHKTLKIQCTSTKPAK 55

Query: 1626 PAAEVDWRQKRELLLEKRVRSVDVKEALRLQKENNFVILDVRPEAEYKEGHPPGAINVEM 1447
            PAAEVDWRQKRELLLEKRVRSVDVKEA RLQKENNFVILDVRPEAEYK GHPPGAINVEM
Sbjct:   56 PAAEVDWRQKRELLLEKRVRSVDVKEAQRLQKENNFVILDVRPEAEYKAGHPPGAINVEM 115

Query: 1446 YRLIREWTPWDIARRLGFAFFGIFSGTEENPEFIKSVEAKLDKEAKIIVACSSAGTMKPT 1267
            YRLIREWT WDIARRLGFAFFGIFSGTEENPEFI+SVEAKLDKEAKIIVACSSAGTMKPT
Sbjct:  116 YRLIREWTAWDIARRLGFAFFGIFSGTEENPEFIQSVEAKLDKEAKIIVACSSAGTMKPT 175

Query: 1266 QNLPEGQQSRSLIAAYVLVLNGYKNVFHLEGGIYTWSKEGLPIES-EED* 1120
            QNLPEGQQSRSLIAAY+LVLNGYKNVFHLEGGIYTW KEGLP+E+ EED*
Sbjct:  176 QNLPEGQQSRSLIAAYLLVLNGYKNVFHLEGGIYTWGKEGLPVETIEED* 225


 Score =  68 bits (164), Expect = 2e-011
 Identities = 41/63 (65%), Positives = 46/63 (73%), Gaps = 6/63 (9%)
 Frame = -3

Query: 2070 MASLTSIATPYRSSSYPSSSQALRVKLAGNTLFSAGVRSPASSSSSSSFLTIRSAATKPD 1891
            MASLTSIATP     YPSSSQALR+K +GNTLFSAGVRS A  S   + L I+  +TKP 
Sbjct:    1 MASLTSIATP-----YPSSSQALRLKSSGNTLFSAGVRSAAMVSGHKT-LKIQCTSTKPA 54

Query: 1890 KPA 1882
            KPA
Sbjct:   55 KPA 57

>TAIR9_protein||AT3G08920.1 | Symbols:  | rhodanese-like domain-containing
        protein | chr3:2712274-2713117 FORWARD

          Length = 215

 Score =  54 bits (129), Expect = 3e-007
 Identities = 33/106 (31%), Positives = 63/106 (59%), Gaps = 5/106 (4%)
 Frame = -3

Query: 1596 RELLLEKRVRSVDVKEALRLQKENNFVILDVRPEAEYKEGHPPGAINVEMYRLIREWTPW 1417
            +EL+L  +VR+V+ KEA  +     +++LDVRP  E ++    G+++V ++    +  P 
Sbjct:   37 KELILSGKVRAVEPKEANAVVASEGYILLDVRPAWEREKARVKGSLHVPLFVEDPDNGPI 96

Query: 1416 DIARR-LGFAFFGIFSG---TEENPEF-IKSVEAKLDKEAKIIVAC 1294
             + ++ +   + G+++G   T  N EF ++ VEA  DKE+K++V C
Sbjct:   97 TLLKKWIHLGYIGLWTGQRFTMINDEFALRVVEAVPDKESKVLVVC 142

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,999,982,957
Number of Sequences: 33410
Number of Extensions: 8999982957
Number of Successful Extensions: 311858316
Number of sequences better than 0.0: 0