BLASTX 7.6.2

Query= UN17066 /QuerySize=1334
        (1333 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT1G33980.1 | Symbols: ATUPF3, UPF3 | Smg-4/UPF3 ...    352   3e-097
TAIR9_protein||AT1G33980.2 | Symbols: ATUPF3, UPF3 | Smg-4/UPF3 ...    352   3e-097

>TAIR9_protein||AT1G33980.1 | Symbols: ATUPF3, UPF3 | Smg-4/UPF3 family protein
        | chr1:12351719-12354401 FORWARD

          Length = 483

 Score =  352 bits (903), Expect = 3e-097
 Identities = 192/277 (69%), Positives = 214/277 (77%), Gaps = 21/277 (7%)
 Frame = -3

Query: 1328 KYVEKDNSKGVGSSKQDYNQANSSGKDIPATETASVMDSSLPGIALTMDSGKKKILLLK- 1152
            K V +  +  V SSK DY Q+NSSGK++P  ETA+++DSS PGIALTMDSGKKKILLL+ 
Sbjct:  215 KNVPRKTTADVSSSKPDYRQSNSSGKELPGNETAAIIDSSPPGIALTMDSGKKKILLLRS 274

Query: 1151 KDRDNPVSTPPQQEQQMEANHSGISSTSRQNQKIDVGGRLIKGILRRNETRPSQASSFVQ 972
            KDRDNP + PPQ EQ ++ N S  S+ SRQNQK DVGGRLIKGIL RN++RPSQ+S+FVQ
Sbjct:  275 KDRDNPDNPPPQPEQHIDTNLSRNSTDSRQNQKSDVGGRLIKGILLRNDSRPSQSSTFVQ 334

Query:  971 PEERVEPTEAENSKRPPRPANTRAGKDYHVSATNSEKPERRARNKDRPDRVVWAPRRADG 792
             E+RVEP+EAEN KRP RPANTRAGKDYH S T SEK ERR RNKDRPDRV+WAPRR DG
Sbjct:  335 SEQRVEPSEAENYKRPSRPANTRAGKDYHTSGTISEKQERRTRNKDRPDRVMWAPRR-DG 393

Query:  791 SNISEDQPTSSAANN------------GEVVNSSGGHTLENGSARHSSRRSGARNRKEDG 648
               SEDQP SSA NN            GEVVNSSGGHTLENGSARHSSRR G RNRKE+ 
Sbjct:  394 ---SEDQPLSSAGNNGEVKDRMFSQRSGEVVNSSGGHTLENGSARHSSRRVGGRNRKEE- 449

Query:  647 FALTIEGKTSRRGGGGGGGPSSHEKQKWIQKSSSGT* 537
              +  EGKTSRR  G GGGPSSHEKQ WIQK SSGT*
Sbjct:  450 -VVIGEGKTSRR--GSGGGPSSHEKQMWIQKPSSGT* 483


 Score =  102 bits (254), Expect = 5e-022
 Identities = 62/109 (56%), Positives = 72/109 (66%), Gaps = 6/109 (5%)
 Frame = -3

Query: 872 NSEKPERRARNKDRPDRVVWAPRRADGSNISEDQPTSSAANNGEVVNSSGGHTLENGSAR 693
           N ++P+ R     R D     P  + G+N  E +    +  +GEVVNSSGGHTLENGSAR
Sbjct: 378 NKDRPD-RVMWAPRRDGSEDQPLSSAGNN-GEVKDRMFSQRSGEVVNSSGGHTLENGSAR 435

Query: 692 HSSRRSGARNRKEDGFALTIEGKTSRRGGGGGGGPSSHEKQKWIQKSSS 546
           HSSRR G RNRKE+   +  EGKTSRR  G GGGPSSHEKQ WIQK SS
Sbjct: 436 HSSRRVGGRNRKEE--VVIGEGKTSRR--GSGGGPSSHEKQMWIQKPSS 480

>TAIR9_protein||AT1G33980.2 | Symbols: ATUPF3, UPF3 | Smg-4/UPF3 family protein
        | chr1:12351719-12354401 FORWARD

          Length = 485

 Score =  352 bits (903), Expect = 3e-097
 Identities = 192/277 (69%), Positives = 214/277 (77%), Gaps = 21/277 (7%)
 Frame = -3

Query: 1328 KYVEKDNSKGVGSSKQDYNQANSSGKDIPATETASVMDSSLPGIALTMDSGKKKILLLK- 1152
            K V +  +  V SSK DY Q+NSSGK++P  ETA+++DSS PGIALTMDSGKKKILLL+ 
Sbjct:  217 KNVPRKTTADVSSSKPDYRQSNSSGKELPGNETAAIIDSSPPGIALTMDSGKKKILLLRS 276

Query: 1151 KDRDNPVSTPPQQEQQMEANHSGISSTSRQNQKIDVGGRLIKGILRRNETRPSQASSFVQ 972
            KDRDNP + PPQ EQ ++ N S  S+ SRQNQK DVGGRLIKGIL RN++RPSQ+S+FVQ
Sbjct:  277 KDRDNPDNPPPQPEQHIDTNLSRNSTDSRQNQKSDVGGRLIKGILLRNDSRPSQSSTFVQ 336

Query:  971 PEERVEPTEAENSKRPPRPANTRAGKDYHVSATNSEKPERRARNKDRPDRVVWAPRRADG 792
             E+RVEP+EAEN KRP RPANTRAGKDYH S T SEK ERR RNKDRPDRV+WAPRR DG
Sbjct:  337 SEQRVEPSEAENYKRPSRPANTRAGKDYHTSGTISEKQERRTRNKDRPDRVMWAPRR-DG 395

Query:  791 SNISEDQPTSSAANN------------GEVVNSSGGHTLENGSARHSSRRSGARNRKEDG 648
               SEDQP SSA NN            GEVVNSSGGHTLENGSARHSSRR G RNRKE+ 
Sbjct:  396 ---SEDQPLSSAGNNGEVKDRMFSQRSGEVVNSSGGHTLENGSARHSSRRVGGRNRKEE- 451

Query:  647 FALTIEGKTSRRGGGGGGGPSSHEKQKWIQKSSSGT* 537
              +  EGKTSRR  G GGGPSSHEKQ WIQK SSGT*
Sbjct:  452 -VVIGEGKTSRR--GSGGGPSSHEKQMWIQKPSSGT* 485


 Score =  102 bits (254), Expect = 5e-022
 Identities = 62/109 (56%), Positives = 72/109 (66%), Gaps = 6/109 (5%)
 Frame = -3

Query: 872 NSEKPERRARNKDRPDRVVWAPRRADGSNISEDQPTSSAANNGEVVNSSGGHTLENGSAR 693
           N ++P+ R     R D     P  + G+N  E +    +  +GEVVNSSGGHTLENGSAR
Sbjct: 380 NKDRPD-RVMWAPRRDGSEDQPLSSAGNN-GEVKDRMFSQRSGEVVNSSGGHTLENGSAR 437

Query: 692 HSSRRSGARNRKEDGFALTIEGKTSRRGGGGGGGPSSHEKQKWIQKSSS 546
           HSSRR G RNRKE+   +  EGKTSRR  G GGGPSSHEKQ WIQK SS
Sbjct: 438 HSSRRVGGRNRKEE--VVIGEGKTSRR--GSGGGPSSHEKQMWIQKPSS 482

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,999,982,957
Number of Sequences: 33410
Number of Extensions: 8999982957
Number of Successful Extensions: 311858316
Number of sequences better than 0.0: 0