BLASTX 7.6.2
Query= UN17122 /QuerySize=822
(821 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G54826.1 | Symbols: | FUNCTIONS IN: molecular... 252 3e-067
TAIR9_protein||AT1G68730.1 | Symbols: | zinc finger (DNL type) ... 52 5e-007
>TAIR9_protein||AT3G54826.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger,
Zim17-type (InterPro:IPR007853); Has 284 Blast hits to 284 proteins in
134 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 79;
Plants - 58; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). |
chr3:20310354-20311652 FORWARD
Length = 224
Score = 252 bits (641), Expect = 3e-067
Identities = 137/198 (69%), Positives = 155/198 (78%), Gaps = 7/198 (3%)
Frame = +2
Query: 65 SMAARFLSLRRALSLYLTNQPPRLPLFKAG--KLSQSKSLLSRDHAYLGLLHRQFCGSRE 238
SMAAR L+LRRALSL+ +NQ R PL + +LS S SL SR H Y L RQ RE
Sbjct: 30 SMAARLLALRRALSLF-SNQQHRFPLSQVSTEQLSLSNSLFSRSHVYGRLFQRQLSVIRE 88
Query: 239 ASEAAA--VTKSSNSVAELSKAPSTPPATASEELIVKYKSQLKINPRHDFMMVFTCKVCE 412
A+EA+ V SSNS E +K PS PAT SEE++VKYKSQLKINPRHDFMMVFTCKVC+
Sbjct: 89 ANEASVTNVCNSSNSATESAKVPS--PATPSEEMMVKYKSQLKINPRHDFMMVFTCKVCD 146
Query: 413 TRSMKMASRESYEKGVVVVRCEGCDNLHLIADRLGWFGEPGSVEELLAARGDEFKKGSMD 592
TRSMKMASRESYE GVVVVRC GCDNLHLIADR GWFGEPGSVE+ LA++G+EFKKGSMD
Sbjct: 147 TRSMKMASRESYENGVVVVRCGGCDNLHLIADRRGWFGEPGSVEDFLASQGEEFKKGSMD 206
Query: 593 SLSLTVDDLAGKKMSDE* 646
SL+LT +DLAG K+S E*
Sbjct: 207 SLNLTPEDLAGGKISTE* 224
>TAIR9_protein||AT1G68730.1 | Symbols: | zinc finger (DNL type) family protein
| chr1:25810321-25811128 REVERSE
Length = 171
Score = 52 bits (122), Expect = 5e-007
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = +2
Query: 368 PRHDFMMVFTCKVCETRSMKMASRESYEKGVVVVRCEGCDNLHLIADRLG 517
PR + FTC C R+ ++ +R +YEKG+V V+C GC H + D LG
Sbjct: 102 PRRSLQVEFTCNSCGERTKRLINRHAYEKGLVFVQCAGCLKHHKLVDNLG 151
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,043,379,755
Number of Sequences: 33410
Number of Extensions: 9043379755
Number of Successful Extensions: 311883418
Number of sequences better than 0.0: 0
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