BLASTX 7.6.2
Query= UN17136 /QuerySize=1008
(1007 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P27521|CA4_ARATH Chlorophyll a-b binding protein 4, chloropla... 487 7e-137
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla... 451 3e-126
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl... 321 5e-087
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas... 231 7e-060
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl... 230 2e-059
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl... 127 1e-028
sp|Q9XF89|CB5_ARATH Chlorophyll a-b binding protein CP26, chloro... 126 4e-028
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop... 122 5e-027
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast... 119 3e-026
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl... 115 7e-025
sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII typ... 107 2e-022
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro... 104 2e-021
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c... 100 2e-020
sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl... 100 2e-020
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas... 96 5e-019
sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chl... 95 6e-019
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c... 95 6e-019
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas... 72 4e-012
sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chl... 68 1e-010
sp|P08976|LH18_EUGGR Light-harvesting complex I LH38 proteins (F... 66 4e-010
>sp|P27521|CA4_ARATH Chlorophyll a-b binding protein 4, chloroplastic
OS=Arabidopsis thaliana GN=LHCA4 PE=1 SV=1
Length = 251
Score = 487 bits (1252), Expect = 7e-137
Identities = 238/251 (94%), Positives = 242/251 (96%), Gaps = 2/251 (0%)
Frame = -3
Query: 945 MATVTTQASASIFRPCTSKPRFLTGSSGRLNRELSFKSIGS--KTSSFKVEAKKGEWLPG 772
MATVTT ASASIFRPCTSKPRFLTGSSGRLNR+LSF SIGS KTSSFKVEAKKGEWLPG
Sbjct: 1 MATVTTHASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPG 60
Query: 771 LASPGYLNGSLAGDNGFDPLGLAEDPENLKWFIQAELVNGRWAMLGVAGMLLPEVFTKIG 592
LASP YL GSLAGDNGFDPLGLAEDPENLKWF+QAELVNGRWAMLGVAGMLLPEVFTKIG
Sbjct: 61 LASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120
Query: 591 IINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPP 412
IINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP
Sbjct: 121 IINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPK 180
Query: 411 NEVGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFVIQHNVTGKGPFENLLQHLSD 232
EVGYPGGIFNPLNFAPT EAKEKELANGRLAMLAFLGFV+QHNVTGKGPFENLLQHLSD
Sbjct: 181 GEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSD 240
Query: 231 PWHNTIVQTFS 199
PWHNTIVQTF+
Sbjct: 241 PWHNTIVQTFN 251
>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum
sativum GN=lhcA-P4 PE=1 SV=1
Length = 252
Score = 451 bits (1160), Expect = 3e-126
Identities = 217/251 (86%), Positives = 233/251 (92%), Gaps = 1/251 (0%)
Frame = -3
Query: 945 MATVTTQASASIFRPCTSKPRFLTGSSGRLNRELSFKSIG-SKTSSFKVEAKKGEWLPGL 769
MATVTTQASA+IF PC K RFL GSSG+LNR ++F+ +G S ++SFKVEAKKGEWLPGL
Sbjct: 1 MATVTTQASAAIFGPCGLKSRFLGGSSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGL 60
Query: 768 ASPGYLNGSLAGDNGFDPLGLAEDPENLKWFIQAELVNGRWAMLGVAGMLLPEVFTKIGI 589
ASPGYL GSL GDNGFDPLGLAEDPENL+WF+QAELVNGRWAMLGVAGMLLPEVFT IGI
Sbjct: 61 ASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGI 120
Query: 588 INVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 409
INVP+WY AGKE+YFASSSTLFVIEFIL HYVEIRRWQDIKNPGSVNQDPIFKQYSLP
Sbjct: 121 INVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAG 180
Query: 408 EVGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFVIQHNVTGKGPFENLLQHLSDP 229
EVGYPGGIFNPLNFAPTLEAKEKE+ANGRLAMLAFLGF+IQHNVTGKGPF+NLLQH+SDP
Sbjct: 181 EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDP 240
Query: 228 WHNTIVQTFSG 196
WHNTIVQT G
Sbjct: 241 WHNTIVQTLGG 251
>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chloroplastic
(Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1
Length = 231
Score = 321 bits (822), Expect = 5e-087
Identities = 154/200 (77%), Positives = 171/200 (85%), Gaps = 3/200 (1%)
Frame = -3
Query: 792 KGEWLPGLASPGYLNGSLAGDNGFDPLGLAEDPENLKWFIQAELVNGRWAMLGVAGMLLP 613
KG WLPGL SP YL+GSL GDNGFDPL LAEDPE+L+WF+QA++VNGRWAMLGVAGML+P
Sbjct: 33 KGSWLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIP 92
Query: 612 EVFTKIGIINVPEWYD-AGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPI 436
EV TK G++N PEW GKE YFASSST + + YVEIRRWQDIKNPGSVNQDPI
Sbjct: 93 EVLTKAGLMNAPEWLRLPGKETYFASSSTALRVH-MSSTYVEIRRWQDIKNPGSVNQDPI 151
Query: 435 FKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFVIQHNVTGKGPFE 256
FK YSLPP+E GYPG +FNPLNFAP LE KEKELANGRLAMLAFLGF++QHNV GKGPFE
Sbjct: 152 FKSYSLPPHECGYPGRVFNPLNFAP-LENKEKELANGRLAMLAFLGFLVQHNVHGKGPFE 210
Query: 255 NLLQHLSDPWHNTIVQTFSG 196
NL QHL+DPWHNTI+QT SG
Sbjct: 211 NLQQHLADPWHNTIIQTISG 230
>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic OS=Petunia
hybrida PE=2 SV=1
Length = 270
Score = 231 bits (588), Expect = 7e-060
Identities = 119/241 (49%), Positives = 155/241 (64%), Gaps = 11/241 (4%)
Frame = -3
Query: 894 SKPRFLTGSSGRLNRELSFKSIGSKT---SSFKVEAKKGEWLPGLASPGYLNGSLAGDNG 724
+K FL G R+++ ++ +GS++ S+ + + W PG P +L+GSL GD G
Sbjct: 30 TKASFLGGKRLRVSKFIA--PVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFG 87
Query: 723 FDPLGLAEDPENLKWFIQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYF 544
FDPLGL DPE+LKW QAELV+ RWAMLG AG+ +PE TKIG++N P WY AG+++YF
Sbjct: 88 FDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYF 147
Query: 543 ASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF 367
++TLFVIE +L + E RRW DI PG VN DPIF L +VGYPGG+ F+PL +
Sbjct: 148 TDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGW 207
Query: 366 -----APTLEAKEKELANGRLAMLAFLGFVIQHNVTGKGPFENLLQHLSDPWHNTIVQTF 202
A E + KE+ NGRLAMLA +G QH TG GP +NL HL+DP H TI F
Sbjct: 208 GSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAF 267
Query: 201 S 199
S
Sbjct: 268 S 268
>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloroplastic
OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
Length = 270
Score = 230 bits (584), Expect = 2e-059
Identities = 118/240 (49%), Positives = 154/240 (64%), Gaps = 7/240 (2%)
Frame = -3
Query: 897 TSKPRFLTGSSGRLNRELSFKSIGSKTS-SFKVEAKKGEWLPGLASPGYLNGSLAGDNGF 721
T+K FL G R+++ + + S T+ + + W PG P +L+GSL GD GF
Sbjct: 29 TTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGF 88
Query: 720 DPLGLAEDPENLKWFIQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFA 541
DPLGLA DPE+L+W QAELV+ RWAMLG AG+ +PE+ TKIGI+N P WY AG+++YF
Sbjct: 89 DPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFT 148
Query: 540 SSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF- 367
++TLF++E +L + E RRW DI PG VN DPIF L +VGYPGG+ F+PL +
Sbjct: 149 DTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWG 208
Query: 366 ----APTLEAKEKELANGRLAMLAFLGFVIQHNVTGKGPFENLLQHLSDPWHNTIVQTFS 199
A E + KE+ NGRLAMLA +G QH TG GP +NL HL+DP H TI FS
Sbjct: 209 SGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268
>sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chloroplastic
OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1
Length = 245
Score = 127 bits (318), Expect = 1e-028
Identities = 90/242 (37%), Positives = 122/242 (50%), Gaps = 15/242 (6%)
Frame = -3
Query: 924 ASASIFRPCTS--KPRFLTGSSGRLNRELSFKSIGSKTSSFKVEAKKGEWLPGLASPGYL 751
AS+S R C++ P L SS L F + + + + A EW PG P +L
Sbjct: 2 ASSSGLRSCSAVGVPSLLAPSSRSGRSGLPFCAYATTSGRVTMSA---EWFPGQPRPAHL 58
Query: 750 NGSLAGDNGFDPLGLAEDPENLKWFIQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEW 571
+GS GD GFDPLGLA PEN + F ++E+ + RWAML V G+L+PE + EW
Sbjct: 59 DGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEW 118
Query: 570 --YDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGY 397
G+ Y + + IL +E + ++ +DP K+Y P
Sbjct: 119 AALPDGQATYLGNPVPWGNLPTIL--AIEFLAIAFAEQQRTMEKDPEKKKY--PGGAFDP 174
Query: 396 PGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFVIQHNV-TGKGPFENLLQHLSDPWHN 220
G +P F E K KE+ NGRLAMLAF+GF +Q + G GP ENL HL+DPWHN
Sbjct: 175 LGFSKDPAKFE---ELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHN 231
Query: 219 TI 214
I
Sbjct: 232 NI 233
>sp|Q9XF89|CB5_ARATH Chlorophyll a-b binding protein CP26, chloroplastic
OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1
Length = 280
Score = 126 bits (314), Expect = 4e-028
Identities = 79/204 (38%), Positives = 107/204 (52%), Gaps = 28/204 (13%)
Frame = -3
Query: 762 PGYLNGSLAGDNGFDPLGLAEDPENLKWFIQAELVNGRWAMLGVAGMLLPEVFTKIGIIN 583
P YLNG +AGD G+DP GL + PEN + EL++ RWAMLG AG ++PE K G
Sbjct: 82 PEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANC 141
Query: 582 VPE--WY-------DAGKEQYFASSSTLFVIEFILFHYVEI--RRWQDIKNPGSVNQDPI 436
PE W+ D YF + + ++ ++ V + + I N G +D +
Sbjct: 142 GPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITN-GLDFEDKL 200
Query: 435 FKQYSLPPNEVGYPGGIFNPLNFAPTLE----AKEKELANGRLAMLAFLGFVIQHNVTGK 268
+PGG F+PL A E K KE+ NGRLAM A LGF IQ VTG+
Sbjct: 201 ------------HPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGE 248
Query: 267 GPFENLLQHLSDPWHNTIVQTFSG 196
GP ENL +HLSDP+ N ++ +G
Sbjct: 249 GPVENLAKHLSDPFGNNLLTVIAG 272
>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chloroplastic
OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1
Length = 246
Score = 122 bits (305), Expect = 5e-027
Identities = 74/194 (38%), Positives = 103/194 (53%), Gaps = 10/194 (5%)
Frame = -3
Query: 786 EWLPGLASPGYLNGSLAGDNGFDPLGLAEDPENLKWFIQAELVNGRWAMLGVAGMLLPEV 607
+W+PG P YL+GS GD GFD LGL E P NL+ + ++EL++ RWAML V G+++PE
Sbjct: 48 DWMPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEA 107
Query: 606 FTKIGIINVPEW--YDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIF 433
+ EW G+ Y + IL +E +++ S+ +D
Sbjct: 108 LGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTIL--AIEFLAIAFVEHQRSMEKDSEK 165
Query: 432 KQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFVIQHNV-TGKGPFE 256
K+Y P G +P F E K KE+ NGRLA+LA +GF +Q + G GP E
Sbjct: 166 KKY--PGGAFDPLGYSKDPAKFE---ELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLE 220
Query: 255 NLLQHLSDPWHNTI 214
NL HL+DPWHN I
Sbjct: 221 NLATHLADPWHNNI 234
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
OS=Physcomitrella patens PE=3 SV=1
Length = 269
Score = 119 bits (298), Expect = 3e-026
Identities = 91/250 (36%), Positives = 120/250 (48%), Gaps = 16/250 (6%)
Frame = -3
Query: 933 TTQASASIFRPCTSKPRFLTGS-SGRLN-RELSFKSIGSKTSSFKVEAKKGEWLPGLASP 760
T A S+ +P R + G+ R+ R KS GS T + + K +P
Sbjct: 10 TALAGQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETP 69
Query: 759 GYLNGSLAGDNGFDPLGLAEDPENLKWFIQAELVNGRWAMLGVAGMLLPEVFTKIGI-IN 583
YLNG AGD G+D GL+ DPE + E+++ RWAMLG G L PE+ K G+
Sbjct: 70 SYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFG 129
Query: 582 VPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPPN 409
W+ AG Q F+ ++ L H I W + G+V ++ P
Sbjct: 130 EAVWFKAG-AQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG---YRVAGGPLG 185
Query: 408 EVG---YPGGIFNPLNFAPT----LEAKEKELANGRLAMLAFLGFVIQHNVTGKGPFENL 250
EV YPGG F+PL A E K KE+ NGRLAM + GF +Q VTGKGP ENL
Sbjct: 186 EVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 245
Query: 249 LQHLSDPWHN 220
HL+DP N
Sbjct: 246 NDHLADPVAN 255
>sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloroplastic
OS=Hordeum vulgare GN=CAB2 PE=3 SV=1
Length = 264
Score = 115 bits (286), Expect = 7e-025
Identities = 75/192 (39%), Positives = 99/192 (51%), Gaps = 14/192 (7%)
Frame = -3
Query: 765 SPGYLNGSLAGDNGFDPLGLAEDPENLKWFIQAELVNGRWAMLGVAGMLLPEVFTKIGI- 589
SP YL G GD G+D GL+ DPE + E+++GRWAMLG G + PE+ + G+
Sbjct: 64 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVK 123
Query: 588 INVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLP 415
W+ G Q F+ ++ L H I W + G+V ++ P
Sbjct: 124 FGEAVWFKKG-SQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEG---YRVAGGP 179
Query: 414 PNEVG---YPGGIFNPLNFAPTLEA----KEKELANGRLAMLAFLGFVIQHNVTGKGPFE 256
EV YPGG F+PL A EA K KE+ NGRLAM + GF +Q VTGKGP E
Sbjct: 180 LGEVVDPLYPGGSFDPLGLADDAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 239
Query: 255 NLLQHLSDPWHN 220
NL HL+DP +N
Sbjct: 240 NLADHLADPVNN 251
>sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII type I,
chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1
Length = 253
Score = 107 bits (265), Expect = 2e-022
Identities = 76/241 (31%), Positives = 108/241 (44%), Gaps = 43/241 (17%)
Frame = -3
Query: 849 ELSFKSIGSKTSSFKVEAK----------KGEWLPGL---ASPGYLNGSLAGDNGFDPLG 709
+++ K+ G KT++ K + +WL A+P YL G GD G+D G
Sbjct: 12 QVTCKATGKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAG 71
Query: 708 LAEDPENLKWFIQAELVNGRWAMLGVAGMLLPEVFTKIGI-INVPEWYDAGKE------- 553
L+ DPE K + + EL++ RWAMLG G PE+ K G W+ AG +
Sbjct: 72 LSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGL 131
Query: 552 QYFASSSTLFVIEFILFHYVE------IRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPG 391
Y + S + + V+ I ++ P DP+ YPG
Sbjct: 132 DYLGNPSLVHAQNIVATSAVQVILMGLIEGYRVNGGPAGEGLDPL------------YPG 179
Query: 390 GIFNPLNFAPT----LEAKEKELANGRLAMLAFLGFVIQHNVTGKGPFENLLQHLSDPWH 223
F+PL A E K KE+ NGRLA + GF +Q VTGKGP +NL HL++P
Sbjct: 180 ESFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKGPVQNLDDHLANPTV 239
Query: 222 N 220
N
Sbjct: 240 N 240
>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloroplastic
OS=Spinacia oleracea PE=2 SV=1
Length = 261
Score = 104 bits (257), Expect = 2e-021
Identities = 62/164 (37%), Positives = 90/164 (54%), Gaps = 22/164 (13%)
Frame = -3
Query: 798 AKKGEWLPGL------ASPGYLNGSLAGDNGFDPLGLAEDPENLKWFIQAELVNGRWAML 637
A K W+P + P +L+GSL GD GFDPLGL +DP LKW+ +AEL++GRWAML
Sbjct: 55 APKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAML 114
Query: 636 GVAGMLLPEVFTKIGIINVPEWYDAGKEQYFA---SSSTLFVIEFILFHYVEIRRWQDIK 466
V G+ + + +T I W++AG + S TL + +L +VE +RW D
Sbjct: 115 AVLGIFVGQAWTGI------PWFEAGADPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFF 168
Query: 465 NPGSVNQD------PIFKQYSLPPNEVGYPGG-IFNPLNFAPTL 355
+P S + + + +S E GYPGG F+PL+ A T+
Sbjct: 169 DPDSQSVEWATPWSRTAENFSNSTGEQGYPGGKFFDPLSLAGTI 212
>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, chloroplastic
OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1
Length = 256
Score = 100 bits (248), Expect = 2e-020
Identities = 62/164 (37%), Positives = 88/164 (53%), Gaps = 22/164 (13%)
Frame = -3
Query: 798 AKKGEWLP------GLASPGYLNGSLAGDNGFDPLGLAEDPENLKWFIQAELVNGRWAML 637
A K W+P L P +L+GSL GD GFDPLGL +DP LKW+ +AEL++GRWAM
Sbjct: 50 AAKKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMA 109
Query: 636 GVAGMLLPEVFTKIGIINVPEWYDAGKEQYFA---SSSTLFVIEFILFHYVEIRRWQDIK 466
V G+ + + ++ I W++AG + S TL + IL +VE +RW D
Sbjct: 110 AVLGIFVGQAWSGI------PWFEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVDFF 163
Query: 465 NPGSVNQD------PIFKQYSLPPNEVGYPGG-IFNPLNFAPTL 355
+P S + + + ++ E GYPGG F+PL A TL
Sbjct: 164 DPDSQSVEWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTL 207
>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloroplastic
OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
Length = 273
Score = 100 bits (247), Expect = 2e-020
Identities = 66/156 (42%), Positives = 86/156 (55%), Gaps = 19/156 (12%)
Frame = -3
Query: 642 MLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKN 463
+LG AG++ E T + AG Y+A + TLFV+E L + E RR+QD
Sbjct: 119 ILGKAGLIPQE--TALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAK 176
Query: 462 PGSVNQDPIFKQYSL-------PPNEVGYPGG-IFNPLNFA----PTLEAKEKELANGRL 319
PGS+ KQY L + YPGG +FNPL F E K KE+ NGRL
Sbjct: 177 PGSMG-----KQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRL 231
Query: 318 AMLAFLGFVIQHNVTGKGPFENLLQHLSDPWHNTIV 211
AMLA LG+ IQ VTG GP++NLL HL+DP +N ++
Sbjct: 232 AMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNVL 267
>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum
sativum GN=lhca3 PE=1 SV=1
Length = 275
Score = 96 bits (236), Expect = 5e-019
Identities = 59/130 (45%), Positives = 74/130 (56%), Gaps = 17/130 (13%)
Frame = -3
Query: 564 AGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSL-------PPNE 406
AG Y+A + TLFV+E L + E RR+QD PGS+ KQY L
Sbjct: 145 AGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMG-----KQYFLGLEKGFGGSGN 199
Query: 405 VGYPGG-IFNPLNFA----PTLEAKEKELANGRLAMLAFLGFVIQHNVTGKGPFENLLQH 241
YPGG FNPL F E K KE+ NGRLAMLA LG+ IQ VTG GP++NLL H
Sbjct: 200 PAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDH 259
Query: 240 LSDPWHNTIV 211
++DP +N ++
Sbjct: 260 VADPVNNNVL 269
>sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chloroplastic
OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1
Length = 290
Score = 95 bits (235), Expect = 6e-019
Identities = 64/176 (36%), Positives = 85/176 (48%), Gaps = 39/176 (22%)
Frame = -3
Query: 678 FIQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFASS-----------S 532
F + EL++GRWAML G L E T + W DAGK + S S
Sbjct: 136 FRECELIHGRWAMLATLGALSVEWLTGV------TWQDAGKVELVDGSSYLGQPLPFSIS 189
Query: 531 TLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGG-IFNPLNFA--- 364
TL IE ++ Y+E +R ++ + + YPGG F+PL A
Sbjct: 190 TLIWIEVLVIGYIEFQRNAELDSEKRL-----------------YPGGKFFDPLGLAADP 232
Query: 363 -PTLEAKEKELANGRLAMLAFLGFVIQHNVTGKGPFENLLQHLSDPWHNTIVQTFS 199
T + + E+ + RLAM+AFLGF +Q TGKGP N HLSDP H TI+ TFS
Sbjct: 233 EKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFS 288
>sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, chloroplastic
OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1
Length = 256
Score = 95 bits (235), Expect = 6e-019
Identities = 60/164 (36%), Positives = 87/164 (53%), Gaps = 22/164 (13%)
Frame = -3
Query: 798 AKKGEWLP------GLASPGYLNGSLAGDNGFDPLGLAEDPENLKWFIQAELVNGRWAML 637
A K W+P L P +L+GSL GD GFDPLGL +DP LKW+ +AEL++GRWAM
Sbjct: 50 APKKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMA 109
Query: 636 GVAGMLLPEVFTKIGIINVPEWYDAGKEQYFA---SSSTLFVIEFILFHYVEIRRWQDIK 466
V G+ + + ++ I W++AG + S +L + +L +VE +RW D
Sbjct: 110 AVLGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFF 163
Query: 465 NPGSVNQD------PIFKQYSLPPNEVGYPGG-IFNPLNFAPTL 355
+ S + D + ++ E GYPGG F+PL A TL
Sbjct: 164 DNDSQSIDWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTL 207
>sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum
sativum GN=CAB8 PE=1 SV=1
Length = 268
Score = 72 bits (176), Expect = 4e-012
Identities = 38/64 (59%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
Frame = -3
Query: 399 YPGGIFNPLNFAPTLEA----KEKELANGRLAMLAFLGFVIQHNVTGKGPFENLLQHLSD 232
YPGG F+PL A EA K KEL NGRLAM + GF +Q VTGKGP ENL HLSD
Sbjct: 192 YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSD 251
Query: 231 PWHN 220
P +N
Sbjct: 252 PVNN 255
>sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chloroplastic
OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1
Length = 287
Score = 68 bits (164), Expect = 1e-010
Identities = 37/72 (51%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Frame = -3
Query: 399 YPGG-IFNPLNFA--PTLEAKEK--ELANGRLAMLAFLGFVIQHNVTGKGPFENLLQHLS 235
YPGG F+PL A P +A+ + E+ + RLAM+ FLGF +Q TGKGP N HLS
Sbjct: 214 YPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLS 273
Query: 234 DPWHNTIVQTFS 199
DP H TI+ TFS
Sbjct: 274 DPLHTTIIDTFS 285
>sp|P08976|LH18_EUGGR Light-harvesting complex I LH38 proteins (Fragment)
OS=Euglena gracilis PE=2 SV=1
Length = 530
Score = 66 bits (159), Expect = 4e-010
Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Frame = -3
Query: 783 WLPGLASPGYLNGSLAGDNGFDPLGLAEDPENLKWFIQAELVNGRWAMLGVAGMLLPEVF 604
W P +P +LNG GD GFDP GLA DP+ + AE+ +GR AML V G L+P+
Sbjct: 5 WFPNTLAPSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYL 64
Query: 603 TKIGIINVPEWYDAGK 556
K GI WY+A +
Sbjct: 65 GK-GI-----WYEAAQ 74
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,472,851,095
Number of Sequences: 518415
Number of Extensions: 69472851095
Number of Successful Extensions: 496854919
Number of sequences better than 0.0: 0
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