BLASTX 7.6.2
Query= UN17153 /QuerySize=866
(865 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q5NCF2|TPPC1_MOUSE Trafficking protein particle complex subun... 79 3e-014
sp|Q2KMM2|TPPC1_RAT Trafficking protein particle complex subunit... 79 3e-014
sp|Q17QI1|TPPC1_BOVIN Trafficking protein particle complex subun... 77 2e-013
sp|Q9Y5R8|TPPC1_HUMAN Trafficking protein particle complex subun... 77 2e-013
sp|Q557G3|TPPC1_DICDI Trafficking protein particle complex subun... 75 5e-013
>sp|Q5NCF2|TPPC1_MOUSE Trafficking protein particle complex subunit 1 OS=Mus
musculus GN=Trappc1 PE=1 SV=1
Length = 145
Score = 79 bits (194), Expect = 3e-014
Identities = 39/77 (50%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = +3
Query: 330 FHSFRTNTYKLSFMETPSGIKIILVTHPKTGDLRESLKYIY-GLYVEYVVKNPIYSPGSP 506
F SF+T+ YKL + ETP+GIK+++ T G +R+ L +IY LYVE+VVKNP+ G
Sbjct: 61 FLSFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHIYSALYVEFVVKNPLCPLGQT 120
Query: 507 IKSELFNTALDQYVRSI 557
++SELF + LD YVRS+
Sbjct: 121 VQSELFRSRLDSYVRSL 137
Score = 61 bits (146), Expect = 1e-008
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Frame = +3
Query: 123 HMMYVFNRNGVCLLYKEWNRPLHTLNP-QQDHKLMFGLLFSLKSLTAKMDPTNADKGNLG 299
H +Y+F+RNGVCL Y EW+R P ++++KLM+G+LFS++S +KM P + G L
Sbjct: 4 HNLYLFDRNGVCLHYSEWHRKKQAGIPKEEEYKLMYGMLFSIRSFVSKMSPLDMKDGFL- 62
Query: 300 VPQLPGQGCSFHSFRTNTYKLSFMETPSGI 389
H + T T M T G+
Sbjct: 63 --SFQTSRYKLHYYETPTGIKVVMNTDLGV 90
>sp|Q2KMM2|TPPC1_RAT Trafficking protein particle complex subunit 1 OS=Rattus
norvegicus GN=Trappc1 PE=2 SV=1
Length = 145
Score = 79 bits (194), Expect = 3e-014
Identities = 39/77 (50%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = +3
Query: 330 FHSFRTNTYKLSFMETPSGIKIILVTHPKTGDLRESLKYIY-GLYVEYVVKNPIYSPGSP 506
F SF+T+ YKL + ETP+GIK+++ T G +R+ L +IY LYVE+VVKNP+ G
Sbjct: 61 FLSFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHIYSALYVEFVVKNPLCPLGQT 120
Query: 507 IKSELFNTALDQYVRSI 557
++SELF + LD YVRS+
Sbjct: 121 VQSELFRSRLDSYVRSL 137
Score = 61 bits (146), Expect = 1e-008
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Frame = +3
Query: 123 HMMYVFNRNGVCLLYKEWNRPLHTLNP-QQDHKLMFGLLFSLKSLTAKMDPTNADKGNLG 299
H +Y+F+RNGVCL Y EW+R P ++++KLM+G+LFS++S +KM P + G L
Sbjct: 4 HNLYLFDRNGVCLHYSEWHRKKQAGIPKEEEYKLMYGMLFSIRSFVSKMSPLDMKDGFL- 62
Query: 300 VPQLPGQGCSFHSFRTNTYKLSFMETPSGI 389
H + T T M T G+
Sbjct: 63 --SFQTSRYKLHYYETPTGIKVVMNTDLGV 90
>sp|Q17QI1|TPPC1_BOVIN Trafficking protein particle complex subunit 1 OS=Bos
taurus GN=TRAPPC1 PE=2 SV=1
Length = 145
Score = 77 bits (187), Expect = 2e-013
Identities = 38/77 (49%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = +3
Query: 330 FHSFRTNTYKLSFMETPSGIKIILVTHPKTGDLRESLKYIY-GLYVEYVVKNPIYSPGSP 506
F +F+T+ YKL + ETP+GIK+++ T G +R+ L +IY LYVE VVKNP+ G
Sbjct: 61 FLAFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHIYSALYVELVVKNPLCPLGQT 120
Query: 507 IKSELFNTALDQYVRSI 557
++SELF + LD YVRS+
Sbjct: 121 VQSELFRSRLDSYVRSL 137
Score = 61 bits (146), Expect = 1e-008
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Frame = +3
Query: 123 HMMYVFNRNGVCLLYKEWNRPLHTLNP-QQDHKLMFGLLFSLKSLTAKMDPTNADKGNLG 299
H +Y+F+RNGVCL Y EW+R P ++++KLM+G+LFS++S +KM P + G L
Sbjct: 4 HNLYLFDRNGVCLHYSEWHRKKQAGIPKEEEYKLMYGMLFSIRSFVSKMSPLDMKDGFLA 63
Query: 300 VPQLPGQGCSFHSFRTNTYKLSFMETPSGI 389
H + T T M T G+
Sbjct: 64 ---FQTSRYKLHYYETPTGIKVVMNTDLGV 90
>sp|Q9Y5R8|TPPC1_HUMAN Trafficking protein particle complex subunit 1 OS=Homo
sapiens GN=TRAPPC1 PE=1 SV=1
Length = 145
Score = 77 bits (187), Expect = 2e-013
Identities = 38/77 (49%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = +3
Query: 330 FHSFRTNTYKLSFMETPSGIKIILVTHPKTGDLRESLKYIY-GLYVEYVVKNPIYSPGSP 506
F +F+T+ YKL + ETP+GIK+++ T G +R+ L +IY LYVE VVKNP+ G
Sbjct: 61 FLAFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHIYSALYVELVVKNPLCPLGQT 120
Query: 507 IKSELFNTALDQYVRSI 557
++SELF + LD YVRS+
Sbjct: 121 VQSELFRSRLDSYVRSL 137
Score = 61 bits (146), Expect = 1e-008
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Frame = +3
Query: 123 HMMYVFNRNGVCLLYKEWNRPLHTLNP-QQDHKLMFGLLFSLKSLTAKMDPTNADKGNLG 299
H +Y+F+RNGVCL Y EW+R P ++++KLM+G+LFS++S +KM P + G L
Sbjct: 4 HNLYLFDRNGVCLHYSEWHRKKQAGIPKEEEYKLMYGMLFSIRSFVSKMSPLDMKDGFLA 63
Query: 300 VPQLPGQGCSFHSFRTNTYKLSFMETPSGI 389
H + T T M T G+
Sbjct: 64 ---FQTSRYKLHYYETPTGIKVVMNTDLGV 90
>sp|Q557G3|TPPC1_DICDI Trafficking protein particle complex subunit 1
OS=Dictyostelium discoideum GN=trappc1-1 PE=3 SV=1
Length = 142
Score = 75 bits (183), Expect = 5e-013
Identities = 35/77 (45%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = +3
Query: 330 FHSFRTNTYKLSFMETPSGIKIILVTHPKTGDLRESLKYIYG-LYVEYVVKNPIYSPGSP 506
FH ++T+TYKL + ET S IK I+++ P DLR+ LK IY ++VEYV+KNPIY G+
Sbjct: 61 FHCYKTSTYKLHYYETLSCIKFIIMSDPNVPDLRDDLKKIYSQIFVEYVIKNPIYKHGTT 120
Query: 507 IKSELFNTALDQYVRSI 557
+K + F L+ Y++ +
Sbjct: 121 VKCDTFINQLNLYLKQM 137
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,472,851,095
Number of Sequences: 518415
Number of Extensions: 69472851095
Number of Successful Extensions: 496854919
Number of sequences better than 0.0: 0
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