Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN17160


BLASTX 7.6.2

Query= UN17160 /QuerySize=602
        (601 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT4G39200.1 | Symbols:  | 40S ribosomal protein S...    214   4e-056
TAIR9_protein||AT2G21580.1 | Symbols:  | 40S ribosomal protein S...    210   5e-055
TAIR9_protein||AT4G39200.2 | Symbols:  | 40S ribosomal protein S...    208   3e-054
TAIR9_protein||AT4G34555.1 | Symbols:  | 40S ribosomal protein S...    205   3e-053
TAIR9_protein||AT2G21580.2 | Symbols:  | 40S ribosomal protein S...    204   5e-053
TAIR9_protein||AT2G16360.1 | Symbols:  | 40S ribosomal protein S...    139   1e-033

>TAIR9_protein||AT4G39200.1 | Symbols:  | 40S ribosomal protein S25 (RPS25E) |
        chr4:18257464-18258464 FORWARD

          Length = 109

 Score =  214 bits (544), Expect = 4e-056
 Identities = 107/109 (98%), Positives = 108/109 (99%)
 Frame = +2

Query:  83 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 262
           MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL
Sbjct:   1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 263 ITPSILSDRMRINGSLARKAIRELMAKGVIRMVAAHSSQQIYTRATNT* 409
           ITPSILSDRMRINGSLAR+AIRELMAKGVIRMVAAHSSQQIYTRATNT*
Sbjct:  61 ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT* 109

>TAIR9_protein||AT2G21580.1 | Symbols:  | 40S ribosomal protein S25 (RPS25B) |
        chr2:9236629-9237510 FORWARD

          Length = 109

 Score =  210 bits (534), Expect = 5e-055
 Identities = 104/109 (95%), Positives = 107/109 (98%)
 Frame = +2

Query:  83 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 262
           MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLLTEAPKFKL
Sbjct:   1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 263 ITPSILSDRMRINGSLARKAIRELMAKGVIRMVAAHSSQQIYTRATNT* 409
           ITPSILSDRMRINGSLAR+AIRELMAKG+IRMV+AHSSQQIYTRATNT*
Sbjct:  61 ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT* 109

>TAIR9_protein||AT4G39200.2 | Symbols:  | 40S ribosomal protein S25 (RPS25E) |
        chr4:18257464-18258464 FORWARD

          Length = 108

 Score =  208 bits (527), Expect = 3e-054
 Identities = 106/109 (97%), Positives = 107/109 (98%), Gaps = 1/109 (0%)
 Frame = +2

Query:  83 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 262
           MAPKKDKVPPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL
Sbjct:   1 MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 59

Query: 263 ITPSILSDRMRINGSLARKAIRELMAKGVIRMVAAHSSQQIYTRATNT* 409
           ITPSILSDRMRINGSLAR+AIRELMAKGVIRMVAAHSSQQIYTRATNT*
Sbjct:  60 ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT* 108

>TAIR9_protein||AT4G34555.1 | Symbols:  | 40S ribosomal protein S25, putative |
        chr4:16504381-16505339 REVERSE

          Length = 109

 Score =  205 bits (519), Expect = 3e-053
 Identities = 101/107 (94%), Positives = 106/107 (99%)
 Frame = +2

Query:  83 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 262
           MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLL+EAPKFKL
Sbjct:   1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 263 ITPSILSDRMRINGSLARKAIRELMAKGVIRMVAAHSSQQIYTRATN 403
           ITPSILSDR+RINGSLAR+AIRELMAKG IRMV+AHSSQQIYTRAT+
Sbjct:  61 ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107

>TAIR9_protein||AT2G21580.2 | Symbols:  | 40S ribosomal protein S25 (RPS25B) |
        chr2:9236629-9237510 FORWARD

          Length = 108

 Score =  204 bits (517), Expect = 5e-053
 Identities = 103/109 (94%), Positives = 106/109 (97%), Gaps = 1/109 (0%)
 Frame = +2

Query:  83 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 262
           MAPKKDKVPPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQ TYDKLLTEAPKFKL
Sbjct:   1 MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 59

Query: 263 ITPSILSDRMRINGSLARKAIRELMAKGVIRMVAAHSSQQIYTRATNT* 409
           ITPSILSDRMRINGSLAR+AIRELMAKG+IRMV+AHSSQQIYTRATNT*
Sbjct:  60 ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT* 108

>TAIR9_protein||AT2G16360.1 | Symbols:  | 40S ribosomal protein S25 (RPS25A) |
        chr2:7076713-7077366 REVERSE

          Length = 126

 Score =  139 bits (350), Expect = 1e-033
 Identities = 70/83 (84%), Positives = 77/83 (92%)
 Frame = +2

Query: 152 KKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKLITPSILSDRMRINGSLARKAIRE 331
           + +K SKGKQKEKVNNMVLFDQATYDKL++EAPKFKLITPSILSDR+RINGSLARKAIR+
Sbjct:  40 ESRKRSKGKQKEKVNNMVLFDQATYDKLMSEAPKFKLITPSILSDRLRINGSLARKAIRD 99

Query: 332 LMAKGVIRMVAAHSSQQIYTRAT 400
           LM KG IRMV+ HSSQQI TRAT
Sbjct: 100 LMVKGTIRMVSTHSSQQINTRAT 122

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,043,379,755
Number of Sequences: 33410
Number of Extensions: 9043379755
Number of Successful Extensions: 311883418
Number of sequences better than 0.0: 0