BLASTX 7.6.2
Query= UN17160 /QuerySize=602
(601 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G39200.1 | Symbols: | 40S ribosomal protein S... 214 4e-056
TAIR9_protein||AT2G21580.1 | Symbols: | 40S ribosomal protein S... 210 5e-055
TAIR9_protein||AT4G39200.2 | Symbols: | 40S ribosomal protein S... 208 3e-054
TAIR9_protein||AT4G34555.1 | Symbols: | 40S ribosomal protein S... 205 3e-053
TAIR9_protein||AT2G21580.2 | Symbols: | 40S ribosomal protein S... 204 5e-053
TAIR9_protein||AT2G16360.1 | Symbols: | 40S ribosomal protein S... 139 1e-033
>TAIR9_protein||AT4G39200.1 | Symbols: | 40S ribosomal protein S25 (RPS25E) |
chr4:18257464-18258464 FORWARD
Length = 109
Score = 214 bits (544), Expect = 4e-056
Identities = 107/109 (98%), Positives = 108/109 (99%)
Frame = +2
Query: 83 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 262
MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60
Query: 263 ITPSILSDRMRINGSLARKAIRELMAKGVIRMVAAHSSQQIYTRATNT* 409
ITPSILSDRMRINGSLAR+AIRELMAKGVIRMVAAHSSQQIYTRATNT*
Sbjct: 61 ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT* 109
>TAIR9_protein||AT2G21580.1 | Symbols: | 40S ribosomal protein S25 (RPS25B) |
chr2:9236629-9237510 FORWARD
Length = 109
Score = 210 bits (534), Expect = 5e-055
Identities = 104/109 (95%), Positives = 107/109 (98%)
Frame = +2
Query: 83 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 262
MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLLTEAPKFKL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60
Query: 263 ITPSILSDRMRINGSLARKAIRELMAKGVIRMVAAHSSQQIYTRATNT* 409
ITPSILSDRMRINGSLAR+AIRELMAKG+IRMV+AHSSQQIYTRATNT*
Sbjct: 61 ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT* 109
>TAIR9_protein||AT4G39200.2 | Symbols: | 40S ribosomal protein S25 (RPS25E) |
chr4:18257464-18258464 FORWARD
Length = 108
Score = 208 bits (527), Expect = 3e-054
Identities = 106/109 (97%), Positives = 107/109 (98%), Gaps = 1/109 (0%)
Frame = +2
Query: 83 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 262
MAPKKDKVPPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 59
Query: 263 ITPSILSDRMRINGSLARKAIRELMAKGVIRMVAAHSSQQIYTRATNT* 409
ITPSILSDRMRINGSLAR+AIRELMAKGVIRMVAAHSSQQIYTRATNT*
Sbjct: 60 ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT* 108
>TAIR9_protein||AT4G34555.1 | Symbols: | 40S ribosomal protein S25, putative |
chr4:16504381-16505339 REVERSE
Length = 109
Score = 205 bits (519), Expect = 3e-053
Identities = 101/107 (94%), Positives = 106/107 (99%)
Frame = +2
Query: 83 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 262
MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLL+EAPKFKL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60
Query: 263 ITPSILSDRMRINGSLARKAIRELMAKGVIRMVAAHSSQQIYTRATN 403
ITPSILSDR+RINGSLAR+AIRELMAKG IRMV+AHSSQQIYTRAT+
Sbjct: 61 ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107
>TAIR9_protein||AT2G21580.2 | Symbols: | 40S ribosomal protein S25 (RPS25B) |
chr2:9236629-9237510 FORWARD
Length = 108
Score = 204 bits (517), Expect = 5e-053
Identities = 103/109 (94%), Positives = 106/109 (97%), Gaps = 1/109 (0%)
Frame = +2
Query: 83 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 262
MAPKKDKVPPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQ TYDKLLTEAPKFKL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 59
Query: 263 ITPSILSDRMRINGSLARKAIRELMAKGVIRMVAAHSSQQIYTRATNT* 409
ITPSILSDRMRINGSLAR+AIRELMAKG+IRMV+AHSSQQIYTRATNT*
Sbjct: 60 ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT* 108
>TAIR9_protein||AT2G16360.1 | Symbols: | 40S ribosomal protein S25 (RPS25A) |
chr2:7076713-7077366 REVERSE
Length = 126
Score = 139 bits (350), Expect = 1e-033
Identities = 70/83 (84%), Positives = 77/83 (92%)
Frame = +2
Query: 152 KKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKLITPSILSDRMRINGSLARKAIRE 331
+ +K SKGKQKEKVNNMVLFDQATYDKL++EAPKFKLITPSILSDR+RINGSLARKAIR+
Sbjct: 40 ESRKRSKGKQKEKVNNMVLFDQATYDKLMSEAPKFKLITPSILSDRLRINGSLARKAIRD 99
Query: 332 LMAKGVIRMVAAHSSQQIYTRAT 400
LM KG IRMV+ HSSQQI TRAT
Sbjct: 100 LMVKGTIRMVSTHSSQQINTRAT 122
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,043,379,755
Number of Sequences: 33410
Number of Extensions: 9043379755
Number of Successful Extensions: 311883418
Number of sequences better than 0.0: 0
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