BLASTX 7.6.2
Query= UN17181 /QuerySize=1204
(1203 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G11250.1 | Symbols: | 60S acidic ribosomal pr... 568 3e-162
TAIR9_protein||AT3G09200.1 | Symbols: | 60S acidic ribosomal pr... 564 4e-161
TAIR9_protein||AT2G40010.1 | Symbols: | 60S acidic ribosomal pr... 507 8e-144
TAIR9_protein||AT3G09200.2 | Symbols: | 60S acidic ribosomal pr... 450 8e-127
>TAIR9_protein||AT3G11250.1 | Symbols: | 60S acidic ribosomal protein P0
(RPP0C) | chr3:3521453-3522826 FORWARD
Length = 324
Score = 568 bits (1463), Expect = 3e-162
Identities = 297/327 (90%), Positives = 312/327 (95%), Gaps = 6/327 (1%)
Frame = +2
Query: 53 MVKATKAEKKIAYDAKLCQLIDEFTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 232
MVKATKAEKKIAYD KLCQLIDE+TQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 233 MKRSVKIHAENTGNTGILNLMPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 412
MKRSV+IH+EN+GNT ILNL+PLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP
Sbjct: 61 MKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120
Query: 413 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 592
IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180
Query: 593 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDDLVQKFAAGISMVTSLALAISYPTLAAAP 772
GIRPFSYGLVVQSVYDNGSVFSPEVLDLTED LV+KFA+GISMVTSLALA+SYPTLAAAP
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAP 240
Query: 773 HMFINAYKNALAISVATEYTFPQAEKVKEYLKDPSKFAVAVAAVSADAGGGA--SGGAAK 946
HMFINAYKNALAI+VAT+YTFPQAEKVKE+LKDPSKF VA AAVSADAGGG+ +G AAK
Sbjct: 241 HMFINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKFVVAAAAVSADAGGGSAQAGAAAK 300
Query: 947 VEEKKEVVEESDEEDY-GGFDMFGDE* 1024
VEEKK EESDEEDY GGF +F +E*
Sbjct: 301 VEEKK---EESDEEDYEGGFGLFDEE* 324
>TAIR9_protein||AT3G09200.1 | Symbols: | 60S acidic ribosomal protein P0
(RPP0B) | chr3:2823364-2825020 REVERSE
Length = 321
Score = 564 bits (1453), Expect = 4e-161
Identities = 300/322 (93%), Positives = 309/322 (95%), Gaps = 7/322 (2%)
Frame = +2
Query: 53 MVKATKAEKKIAYDAKLCQLIDEFTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 232
MVKATKAEKKIAYD KLCQLIDE+TQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 233 MKRSVKIHAENTGNTGILNLMPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 412
MKRSV+IH+ENTGNT ILNL+PLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP
Sbjct: 61 MKRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120
Query: 413 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 592
IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180
Query: 593 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDDLVQKFAAGISMVTSLALAISYPTLAAAP 772
GIRPFSYGLVVQSVYDNGSVFSPEVLDLTED LV+KFA+GISMVTSLALA+SYPTLAAAP
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAP 240
Query: 773 HMFINAYKNALAISVATEYTFPQAEKVKEYLKDPSKFAVA-VAAVSADAGGGASGGAAKV 949
HMFINAYKNALAI+VATEYTFPQAEKVKEYLKDPSKFAVA VAAVSADAGGGA AAKV
Sbjct: 241 HMFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGAP-AAAKV 299
Query: 950 EEKKEVVEESDEEDYGG-FDMF 1012
EEK EESDEEDYGG F +F
Sbjct: 300 EEK----EESDEEDYGGDFGLF 317
>TAIR9_protein||AT2G40010.1 | Symbols: | 60S acidic ribosomal protein P0
(RPP0A) | chr2:16708578-16710448 REVERSE
Length = 318
Score = 507 bits (1304), Expect = 8e-144
Identities = 262/310 (84%), Positives = 290/310 (93%), Gaps = 5/310 (1%)
Frame = +2
Query: 56 VKATKAEKKIAYDAKLCQLIDEFTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 235
VKATKAEKKI YD+KLCQL++E++QILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM
Sbjct: 3 VKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 62
Query: 236 KRSVKIHAENTGNTGILNLMPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 415
KRSV+IHA+ TGN L+L+PLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI
Sbjct: 63 KRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 122
Query: 416 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLG 595
DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+GDKVGSSEAALLAKLG
Sbjct: 123 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLG 182
Query: 596 IRPFSYGLVVQSVYDNGSVFSPEVLDLTEDDLVQKFAAGISMVTSLALAISYPTLAAAPH 775
IRPFSYGLVV+SVYDNGSVF+PEVL+LTEDDLV+KFAAG+SM+T+L+LAISYPT+AAAPH
Sbjct: 183 IRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAAPH 242
Query: 776 MFINAYKNALAISVATEYTFPQAEKVKEYLKDPSKFAVAVAA-VSADAGGGASGGAAKVE 952
MF+NAYKN LA+++ATEY+FPQAE VKE+LKDP+KFAVAVAA VS ++GG A VE
Sbjct: 243 MFLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKFAVAVAAPVSGESGGAVV--AVAVE 300
Query: 953 EKKEVVEESD 982
E E EESD
Sbjct: 301 E--EAAEESD 308
>TAIR9_protein||AT3G09200.2 | Symbols: | 60S acidic ribosomal protein P0
(RPP0B) | chr3:2823364-2825020 REVERSE
Length = 288
Score = 450 bits (1157), Expect = 8e-127
Identities = 240/263 (91%), Positives = 250/263 (95%), Gaps = 7/263 (2%)
Frame = +2
Query: 230 MMKRSVKIHAENTGNTGILNLMPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 409
++ RSV+IH+ENTGNT ILNL+PLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 27 ILVRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 86
Query: 410 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAK 589
PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAK
Sbjct: 87 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAK 146
Query: 590 LGIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDDLVQKFAAGISMVTSLALAISYPTLAAA 769
LGIRPFSYGLVVQSVYDNGSVFSPEVLDLTED LV+KFA+GISMVTSLALA+SYPTLAAA
Sbjct: 147 LGIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAA 206
Query: 770 PHMFINAYKNALAISVATEYTFPQAEKVKEYLKDPSKFAVA-VAAVSADAGGGASGGAAK 946
PHMFINAYKNALAI+VATEYTFPQAEKVKEYLKDPSKFAVA VAAVSADAGGGA AAK
Sbjct: 207 PHMFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGAP-AAAK 265
Query: 947 VEEKKEVVEESDEEDYGG-FDMF 1012
VEEK EESDEEDYGG F +F
Sbjct: 266 VEEK----EESDEEDYGGDFGLF 284
Score = 66 bits (160), Expect = 3e-011
Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Frame = +2
Query: 53 MVKATKAEKKIAYDAKLCQLIDEFTQILV----VAADNVGSTQLQNIRKGLRGDSVVLMG 220
MVKATKAEKKIAYD KLCQLIDE+TQILV + ++N G+T + N+ L+G+ ++
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVRSVRIHSENTGNTAILNLLPLLQGNVGLIFT 60
Query: 221 KNTMMKRSVKIHAENTG 271
K + + S ++ G
Sbjct: 61 KGDLKEVSEEVAKYKVG 77
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,043,379,755
Number of Sequences: 33410
Number of Extensions: 9043379755
Number of Successful Extensions: 311883418
Number of sequences better than 0.0: 0
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