BLASTX 7.6.2
Query= UN17186 /QuerySize=978
(977 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G19390.1 | Symbols: | FUNCTIONS IN: molecular... 404 7e-113
TAIR9_protein||AT5G13720.1 | Symbols: | LOCATED IN: chloroplast... 173 2e-043
>TAIR9_protein||AT4G19390.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved
protein UCP022348 (InterPro:IPR016804), Uncharacterised protein family
UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G13720.1); Has 553 Blast hits to 553
proteins in 219 species: Archae - 18; Bacteria - 407; Metazoa - 0;
Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 74 (source:
NCBI BLink). | chr4:10574903-10576355 REVERSE
Length = 274
Score = 404 bits (1036), Expect = 7e-113
Identities = 214/275 (77%), Positives = 233/275 (84%), Gaps = 12/275 (4%)
Frame = +2
Query: 101 TSPCRTINANNAVTAPPSPSGMIFHGCRDFVPIDKRLVKSSSRGLNLPTKRL-------- 256
T+PCRTINAN A PSPSG+IF+G RDFVPI+KRLV SS RGL LP++
Sbjct: 2 TTPCRTINAN--AIAAPSPSGLIFNGFRDFVPIEKRLVISSFRGLKLPSRTTKTITSSDW 59
Query: 257 AWSLSSPGR--SLSSSPVASSSTSAAVTSNSSNRLEALEEGIEKVIYTCRFMAFLGTLGS 430
+WS SPGR S S+S AS+STSAAVTSNS+NR EALEEGIEKVIY+CRFM FLGTLGS
Sbjct: 60 SWSYRSPGRLASASTSTSASTSTSAAVTSNSTNRFEALEEGIEKVIYSCRFMTFLGTLGS 119
Query: 431 LFGSVLCFIKGCQYVADSFVQYTVNRGKVILLLVEAIDTYLLGTVMLVFGMGLYELFISN 610
L GSVLCFIKGC YV DSF+QY+VNRGKVI LLVEAID YLLGTVMLVFG+GLYELFISN
Sbjct: 120 LLGSVLCFIKGCMYVVDSFLQYSVNRGKVIFLLVEAIDIYLLGTVMLVFGLGLYELFISN 179
Query: 611 LTTSETISHDNVSNRSSLFGMFPLKERPQWLEVKTVSELKTKLGHVIVMLLLIGLFDKSR 790
L TSE+ +HD VSNRSSLFGMF LKERPQWLEVK+VSELKTKLGHVIVMLLLIGLFDKS+
Sbjct: 180 LDTSESRTHDIVSNRSSLFGMFTLKERPQWLEVKSVSELKTKLGHVIVMLLLIGLFDKSK 239
Query: 791 KVAITSVADLLCISASIFLSSACLFLLSRLNGSH* 895
+V ITSV DLLCIS SIF SSACLFLLSRLNGSH*
Sbjct: 240 RVVITSVTDLLCISVSIFFSSACLFLLSRLNGSH* 274
>TAIR9_protein||AT5G13720.1 | Symbols: | LOCATED IN: chloroplast, chloroplast
inner membrane, chloroplast envelope; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Uncharacterised conserved protein UCP022348
(InterPro:IPR016804), Uncharacterised protein family UPF0114
(InterPro:IPR005134); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G19390.1); Has 294 Blast hits to 294 proteins
in 98 species: Archae - 18; Bacteria - 168; Metazoa - 0; Fungi - 0;
Plants - 53; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). |
chr5:4427960-4429029 FORWARD
Length = 263
Score = 173 bits (438), Expect = 2e-043
Identities = 87/179 (48%), Positives = 121/179 (67%), Gaps = 6/179 (3%)
Frame = +2
Query: 365 EEGIEKVIYTCRFMAFLGTLGSLFGSVLCFIKGCQYVADSFVQYTVN------RGKVILL 526
E +E++I+ RF+A L GSL GS+LCF+ GC Y+ +++ Y N G+++L
Sbjct: 80 ESNVERIIFDFRFLALLAVGGSLAGSLLCFLNGCVYIVEAYKVYWTNCSKGIHTGQMVLR 139
Query: 527 LVEAIDTYLLGTVMLVFGMGLYELFISNLTTSETISHDNVSNRSSLFGMFPLKERPQWLE 706
LVEAID YL GTVML+F MGLY LFIS+ D SSLFGMF +KERP+W++
Sbjct: 140 LVEAIDVYLAGTVMLIFSMGLYGLFISHSPHDVPPESDRALRSSSLFGMFAMKERPKWMK 199
Query: 707 VKTVSELKTKLGHVIVMLLLIGLFDKSRKVAITSVADLLCISASIFLSSACLFLLSRLN 883
+ ++ ELKTK+GHVIVM+LL+ +F++S+ V I + DLL S IFLSSA L++L L+
Sbjct: 200 ISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLH 258
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,043,379,755
Number of Sequences: 33410
Number of Extensions: 9043379755
Number of Successful Extensions: 311883418
Number of sequences better than 0.0: 0
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