BLASTX 7.6.2
Query= UN17218 /QuerySize=1052
(1051 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G17170.1 | Symbols: RFC3 | RFC3 (REGULATOR OF ... 474 6e-134
>TAIR9_protein||AT3G17170.1 | Symbols: RFC3 | RFC3 (REGULATOR OF FATTY-ACID
COMPOSITION 3); structural constituent of ribosome |
chr3:5853186-5854853 REVERSE
Length = 315
Score = 474 bits (1218), Expect = 6e-134
Identities = 241/305 (79%), Positives = 268/305 (87%), Gaps = 18/305 (5%)
Frame = +1
Query: 40 MESLLRASSSLVSLRPRIDGRDSFINSPRVCLIPSLAPRGSKSLPLVVAAAKKKKSKKDD 219
MESLL ASSSLVSLRPRIDGRDSFIN RVCL PSL RGSK LPL VAAAKKKKSKKDD
Sbjct: 1 MESLLHASSSLVSLRPRIDGRDSFINPSRVCLNPSLGRRGSKPLPL-VAAAKKKKSKKDD 59
Query: 220 SHSFSARPDEATGPFPESILLKEKKIDEEGDLLPEFADDEEKELYEFLDLQLQSDLNEER 399
+H+FSARPDEATGPFPESILLKEKKIDEEGDLLPEFAD EEKELY+FLDLQLQSDLNEER
Sbjct: 60 NHNFSARPDEATGPFPESILLKEKKIDEEGDLLPEFADAEEKELYQFLDLQLQSDLNEER 119
Query: 400 MRHYEVVYLIHEKHAEEVESVNEKVQEFLKEKKGRVWRFSDWGMRRLAYKIQKAENAHYI 579
MRHYEVVYLIHEKHAEEVES+N+KVQ++LKEKKG+VWRFSDWGMRRLAYKIQKAENAHYI
Sbjct: 120 MRHYEVVYLIHEKHAEEVESINQKVQDYLKEKKGKVWRFSDWGMRRLAYKIQKAENAHYI 179
Query: 580 LMNFEMEAKHLNEFKGMLDGDERVIRHLVMKRDEAITEDCPPPPEFHSVRASMDGDDDFY 759
LMNFE+EAK+LNEFKG+LD DERVIRHLVMKRDEAITEDCPPPPEFHSVRA D++Y
Sbjct: 180 LMNFEIEAKYLNEFKGLLDSDERVIRHLVMKRDEAITEDCPPPPEFHSVRAG----DEYY 235
Query: 760 DDDDEEL------------EEEGDDVEYEVDDDGNVVMVLYEDDEE-EQGQDQSNKATRE 900
DDD+EE EE+ D++EYEVDDDGNVVMVLY D+EE E+ +D +++
Sbjct: 236 DDDEEEEIEEDEDEGEGEDEEDADNIEYEVDDDGNVVMVLYGDEEEGEEEEDGASEQEEG 295
Query: 901 KNRTT 915
++++T
Sbjct: 296 QDKST 300
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,087,202,181
Number of Sequences: 33410
Number of Extensions: 9087202181
Number of Successful Extensions: 311895222
Number of sequences better than 0.0: 0
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