BLASTX 7.6.2
Query= UN17299 /QuerySize=687
(686 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G29410.1 | Symbols: | 60S ribosomal protein L... 264 4e-071
TAIR9_protein||AT4G29410.2 | Symbols: | 60S ribosomal protein L... 264 4e-071
TAIR9_protein||AT2G19730.1 | Symbols: | 60S ribosomal protein L... 257 6e-069
TAIR9_protein||AT2G19730.2 | Symbols: | 60S ribosomal protein L... 257 6e-069
TAIR9_protein||AT2G19730.3 | Symbols: | 60S ribosomal protein L... 257 6e-069
>TAIR9_protein||AT4G29410.1 | Symbols: | 60S ribosomal protein L28 (RPL28C) |
chr4:14468439-14469964 REVERSE
Length = 144
Score = 264 bits (674), Expect = 4e-071
Identities = 131/144 (90%), Positives = 136/144 (94%)
Frame = +3
Query: 69 MTTVPGQLVWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLCNLNSYKHSGLANKKTVTIQ 248
M TVPGQL+WEIVKRNNCFLVKQFGRGNAKVQFSKESNNL N+NSYKHSGLANKKTVTIQ
Sbjct: 1 MATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKKTVTIQ 60
Query: 249 PADKDQGVVLGTTKTKKQNKPKLSVNKSVLKKEFPRMAKAVANQVVDNYYRPDLKKAALA 428
A KDQGVVLGTTKTK+QNKPKLSVNKS+LKKEF RM+K VANQVVDNYYRPDLKKAALA
Sbjct: 61 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALA 120
Query: 429 RLSVISKGLRVAKSGPKRRNRQA* 500
RLS ISKGLRVAKSGPKRRNRQA*
Sbjct: 121 RLSAISKGLRVAKSGPKRRNRQA* 144
>TAIR9_protein||AT4G29410.2 | Symbols: | 60S ribosomal protein L28 (RPL28C) |
chr4:14468439-14469964 REVERSE
Length = 144
Score = 264 bits (674), Expect = 4e-071
Identities = 131/144 (90%), Positives = 136/144 (94%)
Frame = +3
Query: 69 MTTVPGQLVWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLCNLNSYKHSGLANKKTVTIQ 248
M TVPGQL+WEIVKRNNCFLVKQFGRGNAKVQFSKESNNL N+NSYKHSGLANKKTVTIQ
Sbjct: 1 MATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKKTVTIQ 60
Query: 249 PADKDQGVVLGTTKTKKQNKPKLSVNKSVLKKEFPRMAKAVANQVVDNYYRPDLKKAALA 428
A KDQGVVLGTTKTK+QNKPKLSVNKS+LKKEF RM+K VANQVVDNYYRPDLKKAALA
Sbjct: 61 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALA 120
Query: 429 RLSVISKGLRVAKSGPKRRNRQA* 500
RLS ISKGLRVAKSGPKRRNRQA*
Sbjct: 121 RLSAISKGLRVAKSGPKRRNRQA* 144
>TAIR9_protein||AT2G19730.1 | Symbols: | 60S ribosomal protein L28 (RPL28A) |
chr2:8511752-8512995 FORWARD
Length = 144
Score = 257 bits (655), Expect = 6e-069
Identities = 127/144 (88%), Positives = 135/144 (93%)
Frame = +3
Query: 69 MTTVPGQLVWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLCNLNSYKHSGLANKKTVTIQ 248
M TVPGQL+WEIVK NNCFLVKQFGRGN+KVQFSKE+NNL N++SYKHSGLANKKTVTIQ
Sbjct: 1 MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQ 60
Query: 249 PADKDQGVVLGTTKTKKQNKPKLSVNKSVLKKEFPRMAKAVANQVVDNYYRPDLKKAALA 428
ADKDQ VVL TTKTKKQNKPKLSVNKS+LKKEFPRM+KAVANQVVDNYYRPDLKKAALA
Sbjct: 61 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 120
Query: 429 RLSVISKGLRVAKSGPKRRNRQA* 500
RLS ISKGLRVAKSG K+RNRQA*
Sbjct: 121 RLSAISKGLRVAKSGAKQRNRQA* 144
>TAIR9_protein||AT2G19730.2 | Symbols: | 60S ribosomal protein L28 (RPL28A) |
chr2:8511752-8512995 FORWARD
Length = 144
Score = 257 bits (655), Expect = 6e-069
Identities = 127/144 (88%), Positives = 135/144 (93%)
Frame = +3
Query: 69 MTTVPGQLVWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLCNLNSYKHSGLANKKTVTIQ 248
M TVPGQL+WEIVK NNCFLVKQFGRGN+KVQFSKE+NNL N++SYKHSGLANKKTVTIQ
Sbjct: 1 MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQ 60
Query: 249 PADKDQGVVLGTTKTKKQNKPKLSVNKSVLKKEFPRMAKAVANQVVDNYYRPDLKKAALA 428
ADKDQ VVL TTKTKKQNKPKLSVNKS+LKKEFPRM+KAVANQVVDNYYRPDLKKAALA
Sbjct: 61 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 120
Query: 429 RLSVISKGLRVAKSGPKRRNRQA* 500
RLS ISKGLRVAKSG K+RNRQA*
Sbjct: 121 RLSAISKGLRVAKSGAKQRNRQA* 144
>TAIR9_protein||AT2G19730.3 | Symbols: | 60S ribosomal protein L28 (RPL28A) |
chr2:8511752-8512995 FORWARD
Length = 144
Score = 257 bits (655), Expect = 6e-069
Identities = 127/144 (88%), Positives = 135/144 (93%)
Frame = +3
Query: 69 MTTVPGQLVWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLCNLNSYKHSGLANKKTVTIQ 248
M TVPGQL+WEIVK NNCFLVKQFGRGN+KVQFSKE+NNL N++SYKHSGLANKKTVTIQ
Sbjct: 1 MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQ 60
Query: 249 PADKDQGVVLGTTKTKKQNKPKLSVNKSVLKKEFPRMAKAVANQVVDNYYRPDLKKAALA 428
ADKDQ VVL TTKTKKQNKPKLSVNKS+LKKEFPRM+KAVANQVVDNYYRPDLKKAALA
Sbjct: 61 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 120
Query: 429 RLSVISKGLRVAKSGPKRRNRQA* 500
RLS ISKGLRVAKSG K+RNRQA*
Sbjct: 121 RLSAISKGLRVAKSGAKQRNRQA* 144
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,087,202,181
Number of Sequences: 33410
Number of Extensions: 9087202181
Number of Successful Extensions: 311895222
Number of sequences better than 0.0: 0
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