BLASTX 7.6.2
Query= UN17315 /QuerySize=609
(608 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|1346871|sp|P49108.1|PSBR_BRACM RecName: Full=Photosystem II 1... 279 2e-073
gi|121483553|gb|ABM54168.1| PSII 10Kd peptide [Brassica juncea] 274 8e-072
gi|119720780|gb|ABL97960.1| photosystem II 10kDa polytpeptide [B... 266 2e-069
gi|28207611|gb|AAO32060.1| photosystem II 10kDa polypeptide [Bra... 262 2e-068
gi|15219268|ref|NP_178025.1| photosystem II subunit R [Arabidops... 261 7e-068
gi|193872616|gb|ACF23036.1| ST244 [Eutrema halophilum] 260 2e-067
gi|297839767|ref|XP_002887765.1| hypothetical protein ARALYDRAFT... 248 4e-064
gi|3914471|sp|Q40163.1|PSBR_SOLLC RecName: Full=Photosystem II 1... 219 2e-055
gi|158343304|gb|ABW35320.1| chloroplast photosystem II PsbR [Pro... 217 9e-055
gi|131399|sp|P06183.1|PSBR_SOLTU RecName: Full=Photosystem II 10... 217 1e-054
gi|255626243|gb|ACU13466.1| unknown [Glycine max] 217 1e-054
gi|21491|emb|CAA27989.1| unnamed protein product [Solanum tubero... 214 1e-053
gi|3914472|sp|Q40519.1|PSBR_TOBAC RecName: Full=Photosystem II 1... 213 2e-053
gi|1418984|emb|CAA99757.1| photosystem II 10 kD polypeptide [Sol... 211 8e-053
gi|83776786|gb|ABC46708.1| chloroplast photosystem II 10 kDa pro... 208 5e-052
gi|225462227|ref|XP_002271791.1| PREDICTED: hypothetical protein... 207 1e-051
gi|118488826|gb|ABK96223.1| unknown [Populus trichocarpa x Popul... 205 6e-051
gi|224115282|ref|XP_002332206.1| hypothetical protein POPTRDRAFT... 202 3e-050
gi|255578166|ref|XP_002529952.1| Photosystem II 10 kDa polypepti... 202 3e-050
gi|224115372|ref|XP_002317015.1| hypothetical protein POPTRDRAFT... 201 9e-050
>gi|1346871|sp|P49108.1|PSBR_BRACM RecName: Full=Photosystem II 10 kDa
polypeptide, chloroplastic; Flags: Precursor
Length = 141
Score = 279 bits (712), Expect = 2e-073
Identities = 140/141 (99%), Positives = 141/141 (100%)
Frame = +3
Query: 63 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 242
MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 243 DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGLTGLAIWAV 422
DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGG+TGLAIWAV
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 120
Query: 423 TLAGILAGGALLVYNTSALAQ 485
TLAGILAGGALLVYNTSALAQ
Sbjct: 121 TLAGILAGGALLVYNTSALAQ 141
>gi|121483553|gb|ABM54168.1| PSII 10Kd peptide [Brassica juncea]
Length = 141
Score = 274 bits (699), Expect = 8e-072
Identities = 137/141 (97%), Positives = 140/141 (99%)
Frame = +3
Query: 63 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 242
MAASVMLS VTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM
Sbjct: 1 MAASVMLSPVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 243 DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGLTGLAIWAV 422
DLRDGVDASGRKGKGYGVYKFVD+YGANVDGYSPIYNE+EWSASGDVYKGG+TGLAIWAV
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDEYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAV 120
Query: 423 TLAGILAGGALLVYNTSALAQ 485
TLAGILAGGALLVYNTSALAQ
Sbjct: 121 TLAGILAGGALLVYNTSALAQ 141
>gi|119720780|gb|ABL97960.1| photosystem II 10kDa polytpeptide [Brassica rapa]
Length = 140
Score = 266 bits (678), Expect = 2e-069
Identities = 134/140 (95%), Positives = 138/140 (98%), Gaps = 1/140 (0%)
Frame = +3
Query: 66 AASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSMD 245
AAS+MLSSVTLKPAGFTVEKMS RGLPSLTRA PSSF+IVASGVKKIKTDKPFGVNGSMD
Sbjct: 2 AASLMLSSVTLKPAGFTVEKMSVRGLPSLTRA-PSSFKIVASGVKKIKTDKPFGVNGSMD 60
Query: 246 LRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGLTGLAIWAVT 425
LRDG+DASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGG+TGLAIWAVT
Sbjct: 61 LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVT 120
Query: 426 LAGILAGGALLVYNTSALAQ 485
LAGILAGGALLVYNTSALAQ
Sbjct: 121 LAGILAGGALLVYNTSALAQ 140
>gi|28207611|gb|AAO32060.1| photosystem II 10kDa polypeptide [Brassica rapa
subsp. pekinensis]
Length = 137
Score = 262 bits (669), Expect = 2e-068
Identities = 132/137 (96%), Positives = 135/137 (98%), Gaps = 1/137 (0%)
Frame = +3
Query: 75 VMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSMDLRD 254
VMLSSVTLKPAGFTVEKMS RGLPSLTRA PSSF+IVASGVKKIKTDKPFGVNGSMDLRD
Sbjct: 2 VMLSSVTLKPAGFTVEKMSVRGLPSLTRA-PSSFKIVASGVKKIKTDKPFGVNGSMDLRD 60
Query: 255 GVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGLTGLAIWAVTLAG 434
G+DASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGG+TGLAIWAVTLAG
Sbjct: 61 GLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLAG 120
Query: 435 ILAGGALLVYNTSALAQ 485
ILAGGALLVYNTSALAQ
Sbjct: 121 ILAGGALLVYNTSALAQ 137
>gi|15219268|ref|NP_178025.1| photosystem II subunit R [Arabidopsis thaliana]
Length = 140
Score = 261 bits (665), Expect = 7e-068
Identities = 131/140 (93%), Positives = 137/140 (97%), Gaps = 1/140 (0%)
Frame = +3
Query: 66 AASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSMD 245
AASVMLSSVTLKPAGFTVEK +ARGLPSLTRA P SF+IVASGVKKIKTDKPFG+NGSMD
Sbjct: 2 AASVMLSSVTLKPAGFTVEKTAARGLPSLTRARP-SFKIVASGVKKIKTDKPFGINGSMD 60
Query: 246 LRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGLTGLAIWAVT 425
LRDGVDASGRKGKGYGVYK+VDKYGANVDGYSPIYNE+EWSASGDVYKGG+TGLAIWAVT
Sbjct: 61 LRDGVDASGRKGKGYGVYKYVDKYGANVDGYSPIYNENEWSASGDVYKGGVTGLAIWAVT 120
Query: 426 LAGILAGGALLVYNTSALAQ 485
LAGILAGGALLVYNTSALAQ
Sbjct: 121 LAGILAGGALLVYNTSALAQ 140
>gi|193872616|gb|ACF23036.1| ST244 [Eutrema halophilum]
Length = 146
Score = 260 bits (662), Expect = 2e-067
Identities = 127/141 (90%), Positives = 132/141 (93%)
Frame = +3
Query: 63 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 242
MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 243 DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGLTGLAIWAV 422
DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNE+EW+ GD YKGG+TGL WA
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEEEWAPGGDTYKGGVTGLVFWAA 120
Query: 423 TLAGILAGGALLVYNTSALAQ 485
TLAG+L GG L+VYNT ALAQ
Sbjct: 121 TLAGLLGGGPLVVYNTGALAQ 141
>gi|297839767|ref|XP_002887765.1| hypothetical protein ARALYDRAFT_477073
[Arabidopsis lyrata subsp. lyrata]
Length = 133
Score = 248 bits (633), Expect = 4e-064
Identities = 124/133 (93%), Positives = 130/133 (97%), Gaps = 1/133 (0%)
Frame = +3
Query: 66 AASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSMD 245
AASVMLSSVTLKPAGFTVEK +ARGLPSLTRA P SF+IVASGVKKIKTDKPFG+NGSMD
Sbjct: 2 AASVMLSSVTLKPAGFTVEKAAARGLPSLTRARP-SFKIVASGVKKIKTDKPFGINGSMD 60
Query: 246 LRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGLTGLAIWAVT 425
LRDGVDASGRKGKGYGVYK+VDKYGANVDGYSPIYNE+EWSASGDVYKGG+TGLAIWAVT
Sbjct: 61 LRDGVDASGRKGKGYGVYKYVDKYGANVDGYSPIYNENEWSASGDVYKGGVTGLAIWAVT 120
Query: 426 LAGILAGGALLVY 464
LAGILAGGALLVY
Sbjct: 121 LAGILAGGALLVY 133
>gi|3914471|sp|Q40163.1|PSBR_SOLLC RecName: Full=Photosystem II 10 kDa
polypeptide, chloroplastic; Flags: Precursor
Length = 138
Score = 219 bits (557), Expect = 2e-055
Identities = 110/138 (79%), Positives = 125/138 (90%), Gaps = 2/138 (1%)
Frame = +3
Query: 72 SVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSMDLR 251
S ++SS++LKP FT+EK+S +GLPSLTR+S SSF++VASGVKK+KTDKP+G+NGSM LR
Sbjct: 3 STVMSSLSLKPT-FTLEKISVKGLPSLTRSS-SSFKVVASGVKKLKTDKPYGINGSMALR 60
Query: 252 DGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGLTGLAIWAVTLA 431
DGVDASGRK KG GVY++VDKYGANVDGYSPIYN DEWS SGDVY GG TGLAIWAVTL
Sbjct: 61 DGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLL 120
Query: 432 GILAGGALLVYNTSALAQ 485
GILAGGALLVYNTSALAQ
Sbjct: 121 GILAGGALLVYNTSALAQ 138
>gi|158343304|gb|ABW35320.1| chloroplast photosystem II PsbR [Prosopis
juliflora]
Length = 139
Score = 217 bits (552), Expect = 9e-055
Identities = 107/139 (76%), Positives = 125/139 (89%), Gaps = 1/139 (0%)
Frame = +3
Query: 69 ASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSMDL 248
AS +++SV+LKPA FTVEK + RGLPSL+R+S SSF++VASG KKIKTDKP+G+NG M+L
Sbjct: 2 ASSVMASVSLKPAPFTVEKSAVRGLPSLSRSS-SSFKVVASGGKKIKTDKPYGINGGMNL 60
Query: 249 RDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGLTGLAIWAVTL 428
+GVD+SGRKGKG GVY+FVDKYG NVDGYSPIYN ++WS SGDVY GG TGLAIWAVTL
Sbjct: 61 VEGVDSSGRKGKGKGVYQFVDKYGTNVDGYSPIYNTEDWSPSGDVYVGGTTGLAIWAVTL 120
Query: 429 AGILAGGALLVYNTSALAQ 485
AG+LAGGALLVYNTSALAQ
Sbjct: 121 AGLLAGGALLVYNTSALAQ 139
>gi|131399|sp|P06183.1|PSBR_SOLTU RecName: Full=Photosystem II 10 kDa
polypeptide, chloroplastic; AltName: Full=Light-inducible
tissue-specific ST-LS1 protein; Flags: Precursor
Length = 138
Score = 217 bits (551), Expect = 1e-054
Identities = 109/138 (78%), Positives = 123/138 (89%), Gaps = 2/138 (1%)
Frame = +3
Query: 72 SVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSMDLR 251
S ++SS++LKP FT+EK S +GLPSL R+S SSF++VASGVKK+KTDKP+G+NGSM LR
Sbjct: 3 STVMSSLSLKPT-FTLEKTSVKGLPSLARSS-SSFKVVASGVKKLKTDKPYGINGSMALR 60
Query: 252 DGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGLTGLAIWAVTLA 431
DGVDASGRK KG GVY++VDKYGANVDGYSPIYN DEWS SGDVY GG TGLAIWAVTL
Sbjct: 61 DGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLV 120
Query: 432 GILAGGALLVYNTSALAQ 485
GILAGGALLVYNTSALAQ
Sbjct: 121 GILAGGALLVYNTSALAQ 138
>gi|255626243|gb|ACU13466.1| unknown [Glycine max]
Length = 139
Score = 217 bits (551), Expect = 1e-054
Identities = 109/139 (78%), Positives = 122/139 (87%), Gaps = 1/139 (0%)
Frame = +3
Query: 69 ASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSMDL 248
AS +++SV LKPA FTVEK S RGLPSL+R S SSFR+VASG KKIKTDKP+G+NG M L
Sbjct: 2 ASSVMASVALKPAPFTVEKSSVRGLPSLSRNS-SSFRVVASGGKKIKTDKPYGINGGMAL 60
Query: 249 RDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGLTGLAIWAVTL 428
R+GVDASGRKGKG GVY+FVDKYGANVDGYSPIY+ +WS +GDVY GG TGLAIWAVTL
Sbjct: 61 REGVDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYAGGTTGLAIWAVTL 120
Query: 429 AGILAGGALLVYNTSALAQ 485
G+LAGGALLVYNTSALAQ
Sbjct: 121 LGLLAGGALLVYNTSALAQ 139
>gi|21491|emb|CAA27989.1| unnamed protein product [Solanum tuberosum]
Length = 138
Score = 214 bits (543), Expect = 1e-053
Identities = 107/138 (77%), Positives = 122/138 (88%), Gaps = 2/138 (1%)
Frame = +3
Query: 72 SVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSMDLR 251
S ++SS++LKP FT+EK S +GLPSL R+S S F++VASGVKK+KTDKP+G+NGSM LR
Sbjct: 3 STVMSSLSLKPT-FTLEKTSVKGLPSLARSS-SPFKVVASGVKKLKTDKPYGINGSMALR 60
Query: 252 DGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGLTGLAIWAVTLA 431
DG+DASGRK KG GVY++VDKYGANVDGYSPIYN DEWS SGDVY GG TGLAIWAVTL
Sbjct: 61 DGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLV 120
Query: 432 GILAGGALLVYNTSALAQ 485
GILAGGALLVYNTSALAQ
Sbjct: 121 GILAGGALLVYNTSALAQ 138
>gi|3914472|sp|Q40519.1|PSBR_TOBAC RecName: Full=Photosystem II 10 kDa
polypeptide, chloroplastic; Short=PII10; Flags: Precursor
Length = 136
Score = 213 bits (541), Expect = 2e-053
Identities = 105/132 (79%), Positives = 118/132 (89%), Gaps = 1/132 (0%)
Frame = +3
Query: 90 VTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSMDLRDGVDAS 269
++LKPA F+VEK + +GLPSL R+S SSFR+ ASGVKK+KTDKP+G+NGSM LRDGVDAS
Sbjct: 6 MSLKPAPFSVEKTAVKGLPSLARSS-SSFRVQASGVKKLKTDKPYGINGSMSLRDGVDAS 64
Query: 270 GRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGLTGLAIWAVTLAGILAGG 449
GRK KG GVY+FVDKYGANVDGYSPIYN D+WS SGDVY GG TGLAIWAVTL GILAGG
Sbjct: 65 GRKQKGKGVYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGTTGLAIWAVTLVGILAGG 124
Query: 450 ALLVYNTSALAQ 485
ALLV+NTSALAQ
Sbjct: 125 ALLVFNTSALAQ 136
>gi|1418984|emb|CAA99757.1| photosystem II 10 kD polypeptide [Solanum
lycopersicum]
Length = 130
Score = 211 bits (535), Expect = 8e-053
Identities = 106/130 (81%), Positives = 117/130 (90%), Gaps = 2/130 (1%)
Frame = +3
Query: 96 LKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSMDLRDGVDASGR 275
LKP FT+EK+S +GLPSLTR+S SSF++VA GVKK+KTDKP+G+NGSM LRDGVDASGR
Sbjct: 3 LKPT-FTLEKISVKGLPSLTRSS-SSFKVVARGVKKLKTDKPYGINGSMALRDGVDASGR 60
Query: 276 KGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGLTGLAIWAVTLAGILAGGAL 455
K KG GVY++VDKYGANVDGYSPIYN DEWS SGDVY GG TGLAIWAVTL GILAGGAL
Sbjct: 61 KPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLLGILAGGAL 120
Query: 456 LVYNTSALAQ 485
LVYNTSALAQ
Sbjct: 121 LVYNTSALAQ 130
>gi|83776786|gb|ABC46708.1| chloroplast photosystem II 10 kDa protein [Arachis
hypogaea]
Length = 129
Score = 208 bits (528), Expect = 5e-052
Identities = 100/129 (77%), Positives = 116/129 (89%), Gaps = 1/129 (0%)
Frame = +3
Query: 99 KPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSMDLRDGVDASGRK 278
KPA FT E+ S RG+PSL+RAS SSF++VASG KKIKTDKP+G+NG M+LRDG+DASGRK
Sbjct: 2 KPAPFTAERSSVRGIPSLSRAS-SSFKVVASGGKKIKTDKPYGINGGMNLRDGLDASGRK 60
Query: 279 GKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGLTGLAIWAVTLAGILAGGALL 458
GKG GVY+FVDKYGANVDGYSPIY++ +WS +GDVY GG TGLAIWAVTL G+LAGGALL
Sbjct: 61 GKGKGVYQFVDKYGANVDGYSPIYDQKDWSPTGDVYTGGTTGLAIWAVTLVGLLAGGALL 120
Query: 459 VYNTSALAQ 485
VYNTSAL+Q
Sbjct: 121 VYNTSALSQ 129
>gi|225462227|ref|XP_002271791.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 139
Score = 207 bits (525), Expect = 1e-051
Identities = 102/139 (73%), Positives = 119/139 (85%), Gaps = 1/139 (0%)
Frame = +3
Query: 69 ASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSMDL 248
A+ ++SS++LKP+ F+VE+ + RGLPSL R+S SSFR+ ASG KKIKTDKP+G+ G M L
Sbjct: 2 AASVMSSLSLKPSPFSVERRAVRGLPSLARSS-SSFRVEASGGKKIKTDKPYGIGGGMKL 60
Query: 249 RDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGLTGLAIWAVTL 428
DG+DASGRKGKG GVY+FVDKYGANVDGYSPIY+ DEWS GDVY GG TGL IWAVTL
Sbjct: 61 SDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPGGDVYVGGTTGLLIWAVTL 120
Query: 429 AGILAGGALLVYNTSALAQ 485
AG+L GGALLVYNTSALAQ
Sbjct: 121 AGLLLGGALLVYNTSALAQ 139
>gi|118488826|gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 137
Score = 205 bits (519), Expect = 6e-051
Identities = 102/136 (75%), Positives = 117/136 (86%), Gaps = 3/136 (2%)
Frame = +3
Query: 78 MLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSMDLRDG 257
+++S++LKP+ FTVEK S RGLP+L+R SF+I ASGVKKIKTD P+G G M+LRDG
Sbjct: 5 VMASLSLKPSPFTVEKSSVRGLPTLSR---RSFKIEASGVKKIKTDTPYGTGGGMNLRDG 61
Query: 258 VDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGLTGLAIWAVTLAGI 437
+DASGRK KG GVY++VDKYGANVDGYSPIYN DEWS SGDVY GG TGL IWAVTLAGI
Sbjct: 62 LDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYAGGKTGLLIWAVTLAGI 121
Query: 438 LAGGALLVYNTSALAQ 485
LAGGALLVY+TSALAQ
Sbjct: 122 LAGGALLVYSTSALAQ 137
>gi|224115282|ref|XP_002332206.1| hypothetical protein POPTRDRAFT_674736
[Populus trichocarpa]
Length = 137
Score = 202 bits (513), Expect = 3e-050
Identities = 100/136 (73%), Positives = 117/136 (86%), Gaps = 3/136 (2%)
Frame = +3
Query: 78 MLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSMDLRDG 257
+++S++LKP+ FTVEK S RGLP+L+R +F+I ASGVKKIKTD P+G G M+LRDG
Sbjct: 5 VMASLSLKPSPFTVEKSSVRGLPTLSR---RTFKIEASGVKKIKTDTPYGTGGGMNLRDG 61
Query: 258 VDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGLTGLAIWAVTLAGI 437
+DASGRK KG GVY++VDKYGANVDGYSPIYN DEWS +GDVY GG TGL IWAVTLAGI
Sbjct: 62 LDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYAGGKTGLLIWAVTLAGI 121
Query: 438 LAGGALLVYNTSALAQ 485
LAGGALLVY+TSALAQ
Sbjct: 122 LAGGALLVYSTSALAQ 137
>gi|255578166|ref|XP_002529952.1| Photosystem II 10 kDa polypeptide, chloroplast
precursor, putative [Ricinus communis]
Length = 138
Score = 202 bits (513), Expect = 3e-050
Identities = 102/139 (73%), Positives = 120/139 (86%), Gaps = 4/139 (2%)
Frame = +3
Query: 72 SVMLSSVTLKPAGFTVEKMSA-RGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSMDL 248
S +++SV+LKP+ FTV+K S+ RGLP+L+R +FRI ASG KKIKTDKP+G+ G M+L
Sbjct: 3 SSVMASVSLKPSPFTVQKSSSVRGLPTLSR---RTFRIEASGGKKIKTDKPYGIGGGMEL 59
Query: 249 RDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGLTGLAIWAVTL 428
R+GVDASGRK G GVY+FVDKYGANVDGYSPIYN DEWS +GDVY GG TGLAIWA+TL
Sbjct: 60 RNGVDASGRKPTGKGVYQFVDKYGANVDGYSPIYNTDEWSPTGDVYAGGATGLAIWAITL 119
Query: 429 AGILAGGALLVYNTSALAQ 485
AG+LAGGALLVYNTSALAQ
Sbjct: 120 AGLLAGGALLVYNTSALAQ 138
>gi|224115372|ref|XP_002317015.1| hypothetical protein POPTRDRAFT_569170
[Populus trichocarpa]
Length = 137
Score = 201 bits (509), Expect = 9e-050
Identities = 100/136 (73%), Positives = 115/136 (84%), Gaps = 3/136 (2%)
Frame = +3
Query: 78 MLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSMDLRDG 257
+++S+ LKP+ FTVEK S RGLP+L+R SF+I ASGVKKIKTD P+G G M+LR+G
Sbjct: 5 VMASLNLKPSPFTVEKSSVRGLPTLSR---RSFKIEASGVKKIKTDTPYGTGGGMNLRNG 61
Query: 258 VDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGLTGLAIWAVTLAGI 437
+DASGRK +G GVY++VDKYGANVDGYSPIYN DEWS SGDVY GG TGL IWAVTLAGI
Sbjct: 62 LDASGRKPRGKGVYQYVDKYGANVDGYSPIYNADEWSPSGDVYAGGKTGLLIWAVTLAGI 121
Query: 438 LAGGALLVYNTSALAQ 485
LAGGALLVY TSALAQ
Sbjct: 122 LAGGALLVYTTSALAQ 137
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,080,201,351,694
Number of Sequences: 15229318
Number of Extensions: 2080201351694
Number of Successful Extensions: 544026442
Number of sequences better than 0.0: 0
|
