Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN17333


BLASTX 7.6.2

Query= UN17333 /QuerySize=611
        (610 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|18422886|ref|NP_568693.1| uncharacterized protein [Arabidopsi...    102   3e-020
gi|297791989|ref|XP_002863879.1| hypothetical protein ARALYDRAFT...     80   2e-013

>gi|18422886|ref|NP_568693.1| uncharacterized protein [Arabidopsis thaliana]

          Length = 103

 Score =  102 bits (254), Expect = 3e-020
 Identities = 53/99 (53%), Positives = 66/99 (66%), Gaps = 4/99 (4%)
 Frame = +3

Query:  66 NKFLFLLPVAFMAVFGTAQTLPSQPIPGQDPTDCMSSMFVIPNCIPEIIQSLVNGEIGTV 245
           NKF FLLPV  + VF T+Q LPS P P Q   DC SS+ VIP+C+PEI +S+ NG+ G V
Sbjct:   4 NKFFFLLPVVCIVVFATSQPLPS-PQPSQ--LDCWSSLEVIPDCVPEIFRSITNGQFGNV 60

Query: 246 GRSCCHAFLGLSADCFKERFDFTLEEFPS-ALRDYCSRQ 359
           G SCCHAF+GL  +C  + F F     PS  LRD+CS +
Sbjct:  61 GPSCCHAFIGLDTECIPQMFIFAPLIPPSRRLRDHCSHK 99

>gi|297791989|ref|XP_002863879.1| hypothetical protein ARALYDRAFT_917711
        [Arabidopsis lyrata subsp. lyrata]

          Length = 127

 Score =  80 bits (196), Expect = 2e-013
 Identities = 43/71 (60%), Positives = 51/71 (71%), Gaps = 3/71 (4%)
 Frame = +2

Query:  59 VDQQVFIPSASCIHGRVRYSSNVAFTAYTWTGPNRLYVIHVCYSQLYPRNYPIVSKRRNR 238
           VDQQV +PS+SC+H R+RYSS VA TA   T PNRL VI+  YS+L P N+PI +K   R
Sbjct:  26 VDQQVLLPSSSCMHRRIRYSSAVAITA---TFPNRLLVINRSYSRLCPGNFPIYNKWTVR 82

Query: 239 DCWSFLLSCLL 271
            C SFLL CLL
Sbjct:  83 GCRSFLLPCLL 93

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,080,201,351,694
Number of Sequences: 15229318
Number of Extensions: 2080201351694
Number of Successful Extensions: 544026442
Number of sequences better than 0.0: 0