BLASTX 7.6.2
Query= UN17346 /QuerySize=1244
(1243 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G12210.1 | Symbols: | geranylgeranyl transfer... 615 2e-176
TAIR9_protein||AT5G12210.2 | Symbols: | geranylgeranyl transfer... 609 2e-174
TAIR9_protein||AT3G12070.1 | Symbols: | geranylgeranyl transfer... 580 7e-166
TAIR9_protein||AT3G12070.2 | Symbols: | geranylgeranyl transfer... 580 7e-166
TAIR9_protein||AT2G39550.1 | Symbols: ATGGT-IB, GGB, PGGT-I | PG... 82 5e-016
>TAIR9_protein||AT5G12210.1 | Symbols: | geranylgeranyl transferase type II
beta subunit, putative / RAB geranylgeranyltransferase beta subunit,
putative | chr5:3947254-3949595 FORWARD
Length = 322
Score = 615 bits (1585), Expect = 2e-176
Identities = 292/321 (90%), Positives = 309/321 (96%)
Frame = -3
Query: 1190 SSSSSSQMGELVADKHVRYILMAEKKKESFESVVMDHLRMNGAYWGLTTLDLLDKLPSVS 1011
SS+SSSQM +LVADKHVRYILMAEKKKESFESVVMDHLRMNGAYWGLTTLDLLDKL VS
Sbjct: 2 SSTSSSQMVQLVADKHVRYILMAEKKKESFESVVMDHLRMNGAYWGLTTLDLLDKLGCVS 61
Query: 1010 VDEVVSWLMTCQHESGGFAGNTGHDPHVLYTLSAVQILALFDKLDILDVAKVSSYIAGLQ 831
+EV+SWLMTCQHESGGFAGNTGHDPH+LYTLSAVQILALFDK++ILD+ KVSSY+A LQ
Sbjct: 62 EEEVISWLMTCQHESGGFAGNTGHDPHILYTLSAVQILALFDKINILDIGKVSSYVAKLQ 121
Query: 830 NEDGSFSGDMWGEVDTRFSYIAICCLSILKCLDKINVEKAVDYIVSCKNLDGGFGCTPGA 651
NEDGSFSGDMWGE+DTRFSYIAICCLSILKCLDKINVEKAV YIVSCKNLDGGFGCTPGA
Sbjct: 122 NEDGSFSGDMWGEIDTRFSYIAICCLSILKCLDKINVEKAVKYIVSCKNLDGGFGCTPGA 181
Query: 650 ESHAGQIFCCVGALAITGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLS 471
ESHAGQIFCCVGALAITGSLHHVDKD LGWWLCERQ+K+GGLNGRPEKL DVCYSWWVLS
Sbjct: 182 ESHAGQIFCCVGALAITGSLHHVDKDSLGWWLCERQLKAGGLNGRPEKLADVCYSWWVLS 241
Query: 470 SLIMIDRVHWINKAKLVKFILDCQDLENGGISDRPDDAVDIFHTYFGVAGLSLLEYPGVK 291
SLIMIDRVHWI+KAKLVKFILDCQDL+NGGISDRP+DAVDIFHTYFGVAGLSLLEYPGVK
Sbjct: 242 SLIMIDRVHWIDKAKLVKFILDCQDLDNGGISDRPEDAVDIFHTYFGVAGLSLLEYPGVK 301
Query: 290 PIDPAYALPVDVINRILLTK* 228
IDPAYALPVDV+NRI+ TK*
Sbjct: 302 VIDPAYALPVDVVNRIIFTK* 322
>TAIR9_protein||AT5G12210.2 | Symbols: | geranylgeranyl transferase type II
beta subunit, putative / RAB geranylgeranyltransferase beta subunit,
putative | chr5:3947254-3949595 FORWARD
Length = 321
Score = 609 bits (1568), Expect = 2e-174
Identities = 291/321 (90%), Positives = 308/321 (95%), Gaps = 1/321 (0%)
Frame = -3
Query: 1190 SSSSSSQMGELVADKHVRYILMAEKKKESFESVVMDHLRMNGAYWGLTTLDLLDKLPSVS 1011
SS+SSSQM +LVADKHVRYILMAE KKESFESVVMDHLRMNGAYWGLTTLDLLDKL VS
Sbjct: 2 SSTSSSQMVQLVADKHVRYILMAE-KKESFESVVMDHLRMNGAYWGLTTLDLLDKLGCVS 60
Query: 1010 VDEVVSWLMTCQHESGGFAGNTGHDPHVLYTLSAVQILALFDKLDILDVAKVSSYIAGLQ 831
+EV+SWLMTCQHESGGFAGNTGHDPH+LYTLSAVQILALFDK++ILD+ KVSSY+A LQ
Sbjct: 61 EEEVISWLMTCQHESGGFAGNTGHDPHILYTLSAVQILALFDKINILDIGKVSSYVAKLQ 120
Query: 830 NEDGSFSGDMWGEVDTRFSYIAICCLSILKCLDKINVEKAVDYIVSCKNLDGGFGCTPGA 651
NEDGSFSGDMWGE+DTRFSYIAICCLSILKCLDKINVEKAV YIVSCKNLDGGFGCTPGA
Sbjct: 121 NEDGSFSGDMWGEIDTRFSYIAICCLSILKCLDKINVEKAVKYIVSCKNLDGGFGCTPGA 180
Query: 650 ESHAGQIFCCVGALAITGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLS 471
ESHAGQIFCCVGALAITGSLHHVDKD LGWWLCERQ+K+GGLNGRPEKL DVCYSWWVLS
Sbjct: 181 ESHAGQIFCCVGALAITGSLHHVDKDSLGWWLCERQLKAGGLNGRPEKLADVCYSWWVLS 240
Query: 470 SLIMIDRVHWINKAKLVKFILDCQDLENGGISDRPDDAVDIFHTYFGVAGLSLLEYPGVK 291
SLIMIDRVHWI+KAKLVKFILDCQDL+NGGISDRP+DAVDIFHTYFGVAGLSLLEYPGVK
Sbjct: 241 SLIMIDRVHWIDKAKLVKFILDCQDLDNGGISDRPEDAVDIFHTYFGVAGLSLLEYPGVK 300
Query: 290 PIDPAYALPVDVINRILLTK* 228
IDPAYALPVDV+NRI+ TK*
Sbjct: 301 VIDPAYALPVDVVNRIIFTK* 321
>TAIR9_protein||AT3G12070.1 | Symbols: | geranylgeranyl transferase type II
beta subunit, putative / RAB geranylgeranyltransferase beta subunit,
putative | chr3:3845420-3847140 REVERSE
Length = 318
Score = 580 bits (1494), Expect = 7e-166
Identities = 284/315 (90%), Positives = 296/315 (93%), Gaps = 3/315 (0%)
Frame = -3
Query: 1163 ELVADKHVRYI--LMAEKKKESFESVVMDHLRMNGAYWGLTTLDLLDKLPSVSVDEVVSW 990
+LVA KH+RYI LMAEKKKESFESVVMDHLRMNGAYWGLTTL LLDKL SVS DEVVSW
Sbjct: 4 KLVAGKHLRYILNLMAEKKKESFESVVMDHLRMNGAYWGLTTLALLDKLGSVSEDEVVSW 63
Query: 989 LMTCQHESGGFAGNTGHDPHVLYTLSAVQILALFDKLDILDVAKVSSYIAGLQNEDGSFS 810
+MTCQHESGGFAGNTGHDPHVLYTLSAVQILALFDKL+ILDV KVS+YIAGLQNEDGSFS
Sbjct: 64 VMTCQHESGGFAGNTGHDPHVLYTLSAVQILALFDKLNILDVEKVSNYIAGLQNEDGSFS 123
Query: 809 GDMWGEVDTRFSYIAICCLSILKCLDKINVEKAVDYIVSCKNLDGGFGCTPGAESHAGQI 630
GD+WGEVDTRFSYIAICCLSILKCLDKINV+KAVDYIVSCKNLDGGFGC+PGAESHAGQI
Sbjct: 124 GDIWGEVDTRFSYIAICCLSILKCLDKINVKKAVDYIVSCKNLDGGFGCSPGAESHAGQI 183
Query: 629 FCCVGALAITGSLHHVDKDLLGWWLCERQ-VKSGGLNGRPEKLPDVCYSWWVLSSLIMID 453
FCCVGALAITG+LH VDKDLLGWWLCERQ +SGGLNGRPEKLPDVCYSWWVLSSLIMID
Sbjct: 184 FCCVGALAITGNLHRVDKDLLGWWLCERQDYESGGLNGRPEKLPDVCYSWWVLSSLIMID 243
Query: 452 RVHWINKAKLVKFILDCQDLENGGISDRPDDAVDIFHTYFGVAGLSLLEYPGVKPIDPAY 273
RVHWI KAKLVKFILD QD++NGGISDRP VDIFHTYFGVAGLSLLEYPGVK IDPAY
Sbjct: 244 RVHWIEKAKLVKFILDSQDMDNGGISDRPSYTVDIFHTYFGVAGLSLLEYPGVKTIDPAY 303
Query: 272 ALPVDVINRILLTK* 228
ALPV VINRIL TK*
Sbjct: 304 ALPVHVINRILFTK* 318
>TAIR9_protein||AT3G12070.2 | Symbols: | geranylgeranyl transferase type II
beta subunit, putative / RAB geranylgeranyltransferase beta subunit,
putative | chr3:3845420-3847140 REVERSE
Length = 318
Score = 580 bits (1494), Expect = 7e-166
Identities = 284/315 (90%), Positives = 296/315 (93%), Gaps = 3/315 (0%)
Frame = -3
Query: 1163 ELVADKHVRYI--LMAEKKKESFESVVMDHLRMNGAYWGLTTLDLLDKLPSVSVDEVVSW 990
+LVA KH+RYI LMAEKKKESFESVVMDHLRMNGAYWGLTTL LLDKL SVS DEVVSW
Sbjct: 4 KLVAGKHLRYILNLMAEKKKESFESVVMDHLRMNGAYWGLTTLALLDKLGSVSEDEVVSW 63
Query: 989 LMTCQHESGGFAGNTGHDPHVLYTLSAVQILALFDKLDILDVAKVSSYIAGLQNEDGSFS 810
+MTCQHESGGFAGNTGHDPHVLYTLSAVQILALFDKL+ILDV KVS+YIAGLQNEDGSFS
Sbjct: 64 VMTCQHESGGFAGNTGHDPHVLYTLSAVQILALFDKLNILDVEKVSNYIAGLQNEDGSFS 123
Query: 809 GDMWGEVDTRFSYIAICCLSILKCLDKINVEKAVDYIVSCKNLDGGFGCTPGAESHAGQI 630
GD+WGEVDTRFSYIAICCLSILKCLDKINV+KAVDYIVSCKNLDGGFGC+PGAESHAGQI
Sbjct: 124 GDIWGEVDTRFSYIAICCLSILKCLDKINVKKAVDYIVSCKNLDGGFGCSPGAESHAGQI 183
Query: 629 FCCVGALAITGSLHHVDKDLLGWWLCERQ-VKSGGLNGRPEKLPDVCYSWWVLSSLIMID 453
FCCVGALAITG+LH VDKDLLGWWLCERQ +SGGLNGRPEKLPDVCYSWWVLSSLIMID
Sbjct: 184 FCCVGALAITGNLHRVDKDLLGWWLCERQDYESGGLNGRPEKLPDVCYSWWVLSSLIMID 243
Query: 452 RVHWINKAKLVKFILDCQDLENGGISDRPDDAVDIFHTYFGVAGLSLLEYPGVKPIDPAY 273
RVHWI KAKLVKFILD QD++NGGISDRP VDIFHTYFGVAGLSLLEYPGVK IDPAY
Sbjct: 244 RVHWIEKAKLVKFILDSQDMDNGGISDRPSYTVDIFHTYFGVAGLSLLEYPGVKTIDPAY 303
Query: 272 ALPVDVINRILLTK* 228
ALPV VINRIL TK*
Sbjct: 304 ALPVHVINRILFTK* 318
>TAIR9_protein||AT2G39550.1 | Symbols: ATGGT-IB, GGB, PGGT-I | PGGT-I;
CAAX-protein geranylgeranyltransferase/ protein heterodimerization |
chr2:16501666-16504144 FORWARD
Length = 376
Score = 82 bits (202), Expect = 5e-016
Identities = 44/120 (36%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Frame = -3
Query: 620 VGALAITGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHW 441
V L+ S +D LL W +RQ GG GR K D CY++W+ + L +I
Sbjct: 251 VDLLSNDSSSSIIDPSLLLNWCLQRQANDGGFQGRTNKPSDTCYAFWIGAVLKLIGGDAL 310
Query: 440 INKAKLVKFILDCQDLENGGISDRPDDAVDIFHTYFGVAGLSLLEYPGVKPIDPAYALPV 261
I+K L KF++ CQ + GG S P D++H+Y+G SLLE G+ P+ P LP+
Sbjct: 311 IDKMALRKFLMSCQS-KYGGFSKFPGQLPDLYHSYYGYTAFSLLEEQGLSPLCPELGLPL 369
Score = 73 bits (177), Expect = 4e-013
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Frame = -3
Query: 971 ESGGFAGNTGHDPHVLYTLSAVQILALFDKLDILDVAKVSSYIAGLQNEDGSFSG-DMWG 795
E+G N H L+ ++++ L +D + + LQ +DGSF + G
Sbjct: 124 ENGDLKHNGSHLASTYCALAILKVIG--HDLSTIDSKSLLISMINLQQDDGSFMPIHIGG 181
Query: 794 EVDTRFSYIAICCLSILKCLDKINVEKAVDYIVSCKNLDGGFGCTPGAESHAGQIFCCVG 615
E D RF Y A +L ++ E A +YI++C++ DGGFG PG+ESH G +C +
Sbjct: 182 ETDLRFVYCAAAICYMLDSWSGMDKESAKNYILNCQSYDGGFGLIPGSESHGGATYCAIA 241
Query: 614 ALAITGSLHHVDKDLL 567
+L + G ++ DLL
Sbjct: 242 SLRLMG---YIGVDLL 254
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,087,202,181
Number of Sequences: 33410
Number of Extensions: 9087202181
Number of Successful Extensions: 311895222
Number of sequences better than 0.0: 0
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