BLASTX 7.6.2
Query= UN17386 /QuerySize=875
(874 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G15200.1 | Symbols: | 40S ribosomal protein S... 386 1e-107
TAIR9_protein||AT5G39850.1 | Symbols: | 40S ribosomal protein S... 356 1e-098
TAIR9_protein||AT5G15200.2 | Symbols: | 40S ribosomal protein S... 271 5e-073
>TAIR9_protein||AT5G15200.1 | Symbols: | 40S ribosomal protein S9 (RPS9B) |
chr5:4935124-4936334 REVERSE
Length = 199
Score = 386 bits (990), Expect = 1e-107
Identities = 193/199 (96%), Positives = 197/199 (98%), Gaps = 1/199 (0%)
Frame = -1
Query: 805 MVHVCYYRNYGKTFKGPRRPFEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 626
MVHVCYYRNYGKTFKGPRRP+EKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD
Sbjct: 1 MVHVCYYRNYGKTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 60
Query: 625 LLTLDEKNPKRIFEGEALLRKMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 446
LLTLDEK+P+RIFEGEALLR+MNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM
Sbjct: 61 LLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 120
Query: 445 AKSIHHSRVLIRQRHIRVGKQLVNIPSFMVRLDSQKHIDFALTSPFGGGRPGRVKRRNEK 266
AKSIHHSRVLIRQRHIRVGKQLVNIPSFMVRLDSQKHIDFALTSPFGGGRPGRVKRRNEK
Sbjct: 121 AKSIHHSRVLIRQRHIRVGKQLVNIPSFMVRLDSQKHIDFALTSPFGGGRPGRVKRRNEK 180
Query: 265 SASKKAS-GGDADGDDEE* 212
SASKKAS GGDADGDDEE*
Sbjct: 181 SASKKASGGGDADGDDEE* 199
>TAIR9_protein||AT5G39850.1 | Symbols: | 40S ribosomal protein S9 (RPS9C) |
chr5:15950053-15951171 FORWARD
Length = 198
Score = 356 bits (912), Expect = 1e-098
Identities = 173/198 (87%), Positives = 191/198 (96%)
Frame = -1
Query: 805 MVHVCYYRNYGKTFKGPRRPFEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 626
MV+V +YRNYGKTFK PRRP+EKERLD+ELKLVGEYGLR KRELWRVQY+LSRIRNAAR+
Sbjct: 1 MVNVRFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYTLSRIRNAARE 60
Query: 625 LLTLDEKNPKRIFEGEALLRKMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 446
LLTLDEKNP+RIFEGEALLR+MNRYGLLDE+QNKLDYVLALTVENFLERRLQTIVFKSGM
Sbjct: 61 LLTLDEKNPRRIFEGEALLRRMNRYGLLDETQNKLDYVLALTVENFLERRLQTIVFKSGM 120
Query: 445 AKSIHHSRVLIRQRHIRVGKQLVNIPSFMVRLDSQKHIDFALTSPFGGGRPGRVKRRNEK 266
AKSIHH+RVLIRQRHIRVG+QLVNIPSFMVR++SQKH+DF+LTSPFGGGRPGRVKRRNE+
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQLVNIPSFMVRVESQKHVDFSLTSPFGGGRPGRVKRRNER 180
Query: 265 SASKKASGGDADGDDEE* 212
+ +KKASGGD D DDEE*
Sbjct: 181 AGAKKASGGDGDEDDEE* 198
>TAIR9_protein||AT5G15200.2 | Symbols: | 40S ribosomal protein S9 (RPS9B) |
chr5:4935602-4936334 REVERSE
Length = 157
Score = 271 bits (692), Expect = 5e-073
Identities = 133/137 (97%), Positives = 137/137 (100%)
Frame = -1
Query: 805 MVHVCYYRNYGKTFKGPRRPFEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 626
MVHVCYYRNYGKTFKGPRRP+EKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD
Sbjct: 1 MVHVCYYRNYGKTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 60
Query: 625 LLTLDEKNPKRIFEGEALLRKMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 446
LLTLDEK+P+RIFEGEALLR+MNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM
Sbjct: 61 LLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 120
Query: 445 AKSIHHSRVLIRQRHIR 395
AKSIHHSRVLIRQRHIR
Sbjct: 121 AKSIHHSRVLIRQRHIR 137
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,179,765,564
Number of Sequences: 33410
Number of Extensions: 9179765564
Number of Successful Extensions: 317221290
Number of sequences better than 0.0: 0
|