BLASTX 7.6.2
Query= UN17427 /QuerySize=1343
(1342 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G20693.1 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 217 2e-056
TAIR9_protein||AT1G20693.2 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 217 2e-056
TAIR9_protein||AT1G20693.3 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 217 2e-056
TAIR9_protein||AT1G20696.1 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 211 1e-054
TAIR9_protein||AT1G20696.3 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 211 1e-054
TAIR9_protein||AT1G20696.2 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 188 1e-047
TAIR9_protein||AT3G51880.1 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 138 1e-032
TAIR9_protein||AT3G51880.2 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 138 1e-032
TAIR9_protein||AT3G51880.3 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 138 1e-032
TAIR9_protein||AT2G17560.1 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 131 1e-030
TAIR9_protein||AT2G17560.2 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 131 1e-030
TAIR9_protein||AT2G17560.3 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 131 1e-030
TAIR9_protein||AT4G35570.1 | Symbols: HMGB5, NFD5, HMGD, NFD05 |... 106 3e-023
TAIR9_protein||AT2G27775.1 | Symbols: | unknown protein | chr2:... 104 2e-022
TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcripti... 88 1e-017
TAIR9_protein||AT2G34450.1 | Symbols: | high mobility group (HM... 87 3e-017
TAIR9_protein||AT2G27775.2 | Symbols: | unknown protein | chr2:... 87 3e-017
TAIR9_protein||AT2G34450.2 | Symbols: | high mobility group (HM... 82 5e-016
TAIR9_protein||AT4G23800.1 | Symbols: | high mobility group (HM... 73 3e-013
TAIR9_protein||AT4G11080.1 | Symbols: | high mobility group (HM... 70 4e-012
>TAIR9_protein||AT1G20693.1 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 145
Score = 217 bits (551), Expect = 2e-056
Identities = 108/125 (86%), Positives = 116/125 (92%), Gaps = 1/125 (0%)
Frame = +3
Query: 645 MKGGKSKTETRSSKLSVAKKPAKAAGRSKAAAKDPNKPKRPASAFFVFMEDFRQTYKKDH 824
MKG KSKTETRSSKLSV KKPAK AGR KAAAKDPNKPKRPASAFFVFMEDFR+T+KK++
Sbjct: 1 MKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKEN 60
Query: 825 PNNKSVAAVGKAGGEKWKSLSDSEKAPFVAKADKRKVEYEKTMKAYNKKLEEGPKEDEEE 1004
P NKSVA VGKA G+KWKSLSDSEKAP+VAKA+KRKVEYEK +KAYNKKLEEGPKED EE
Sbjct: 61 PKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKED-EE 119
Query: 1005 SDKSV 1019
SDKSV
Sbjct: 120 SDKSV 124
>TAIR9_protein||AT1G20693.2 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 143
Score = 217 bits (551), Expect = 2e-056
Identities = 108/125 (86%), Positives = 116/125 (92%), Gaps = 1/125 (0%)
Frame = +3
Query: 645 MKGGKSKTETRSSKLSVAKKPAKAAGRSKAAAKDPNKPKRPASAFFVFMEDFRQTYKKDH 824
MKG KSKTETRSSKLSV KKPAK AGR KAAAKDPNKPKRPASAFFVFMEDFR+T+KK++
Sbjct: 1 MKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKEN 60
Query: 825 PNNKSVAAVGKAGGEKWKSLSDSEKAPFVAKADKRKVEYEKTMKAYNKKLEEGPKEDEEE 1004
P NKSVA VGKA G+KWKSLSDSEKAP+VAKA+KRKVEYEK +KAYNKKLEEGPKED EE
Sbjct: 61 PKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKED-EE 119
Query: 1005 SDKSV 1019
SDKSV
Sbjct: 120 SDKSV 124
>TAIR9_protein||AT1G20693.3 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 144
Score = 217 bits (551), Expect = 2e-056
Identities = 108/125 (86%), Positives = 116/125 (92%), Gaps = 1/125 (0%)
Frame = +3
Query: 645 MKGGKSKTETRSSKLSVAKKPAKAAGRSKAAAKDPNKPKRPASAFFVFMEDFRQTYKKDH 824
MKG KSKTETRSSKLSV KKPAK AGR KAAAKDPNKPKRPASAFFVFMEDFR+T+KK++
Sbjct: 1 MKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKEN 60
Query: 825 PNNKSVAAVGKAGGEKWKSLSDSEKAPFVAKADKRKVEYEKTMKAYNKKLEEGPKEDEEE 1004
P NKSVA VGKA G+KWKSLSDSEKAP+VAKA+KRKVEYEK +KAYNKKLEEGPKED EE
Sbjct: 61 PKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKED-EE 119
Query: 1005 SDKSV 1019
SDKSV
Sbjct: 120 SDKSV 124
>TAIR9_protein||AT1G20696.1 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181174 FORWARD
Length = 142
Score = 211 bits (535), Expect = 1e-054
Identities = 108/125 (86%), Positives = 113/125 (90%), Gaps = 4/125 (3%)
Frame = +3
Query: 645 MKGGKSKTETRSSKLSVAKKPAKAAGRSKAAAKDPNKPKRPASAFFVFMEDFRQTYKKDH 824
MKG KSK ETRS+KLSV KKPAK A K AAKDPNKPKRP+SAFFVFMEDFR TYK++H
Sbjct: 1 MKGAKSKAETRSTKLSVTKKPAKGA---KGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEH 57
Query: 825 PNNKSVAAVGKAGGEKWKSLSDSEKAPFVAKADKRKVEYEKTMKAYNKKLEEGPKEDEEE 1004
P NKSVAAVGKAGGEKWKSLSDSEKAP+VAKADKRKVEYEK MKAYNKKLEEGPKED EE
Sbjct: 58 PKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPKED-EE 116
Query: 1005 SDKSV 1019
SDKSV
Sbjct: 117 SDKSV 121
>TAIR9_protein||AT1G20696.3 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181170 FORWARD
Length = 141
Score = 211 bits (535), Expect = 1e-054
Identities = 108/125 (86%), Positives = 113/125 (90%), Gaps = 4/125 (3%)
Frame = +3
Query: 645 MKGGKSKTETRSSKLSVAKKPAKAAGRSKAAAKDPNKPKRPASAFFVFMEDFRQTYKKDH 824
MKG KSK ETRS+KLSV KKPAK A K AAKDPNKPKRP+SAFFVFMEDFR TYK++H
Sbjct: 1 MKGAKSKAETRSTKLSVTKKPAKGA---KGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEH 57
Query: 825 PNNKSVAAVGKAGGEKWKSLSDSEKAPFVAKADKRKVEYEKTMKAYNKKLEEGPKEDEEE 1004
P NKSVAAVGKAGGEKWKSLSDSEKAP+VAKADKRKVEYEK MKAYNKKLEEGPKED EE
Sbjct: 58 PKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPKED-EE 116
Query: 1005 SDKSV 1019
SDKSV
Sbjct: 117 SDKSV 121
>TAIR9_protein||AT1G20696.2 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181193 FORWARD
Length = 148
Score = 188 bits (475), Expect = 1e-047
Identities = 94/110 (85%), Positives = 99/110 (90%), Gaps = 3/110 (2%)
Frame = +3
Query: 645 MKGGKSKTETRSSKLSVAKKPAKAAGRSKAAAKDPNKPKRPASAFFVFMEDFRQTYKKDH 824
MKG KSK ETRS+KLSV KKPAK A K AAKDPNKPKRP+SAFFVFMEDFR TYK++H
Sbjct: 1 MKGAKSKAETRSTKLSVTKKPAKGA---KGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEH 57
Query: 825 PNNKSVAAVGKAGGEKWKSLSDSEKAPFVAKADKRKVEYEKTMKAYNKKL 974
P NKSVAAVGKAGGEKWKSLSDSEKAP+VAKADKRKVEYEK MKAYNKKL
Sbjct: 58 PKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKL 107
>TAIR9_protein||AT3G51880.1 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 179
Score = 138 bits (346), Expect = 1e-032
Identities = 74/130 (56%), Positives = 89/130 (68%), Gaps = 9/130 (6%)
Frame = +3
Query: 615 TYDLLRQDSSMKGGKSKTETRSSKLSVAKKPAKAAGR-SKAAAKDPNKPKRPASAFFVFM 791
T + L+ K GK K + A+KP K R K A KDPNKPKR SAFFVF+
Sbjct: 13 TKEALKPVDDRKVGKRK--------APAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVFL 64
Query: 792 EDFRQTYKKDHPNNKSVAAVGKAGGEKWKSLSDSEKAPFVAKADKRKVEYEKTMKAYNKK 971
EDFR T+KK++PN K+V+AVGKAGG+KWKS+S +EKAP+ KA KRK EYEK M AYNK
Sbjct: 65 EDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKN 124
Query: 972 LEEGPKEDEE 1001
LEEG E E+
Sbjct: 125 LEEGSDESEK 134
>TAIR9_protein||AT3G51880.2 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 186
Score = 138 bits (346), Expect = 1e-032
Identities = 74/130 (56%), Positives = 89/130 (68%), Gaps = 9/130 (6%)
Frame = +3
Query: 615 TYDLLRQDSSMKGGKSKTETRSSKLSVAKKPAKAAGR-SKAAAKDPNKPKRPASAFFVFM 791
T + L+ K GK K + A+KP K R K A KDPNKPKR SAFFVF+
Sbjct: 13 TKEALKPVDDRKVGKRK--------APAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVFL 64
Query: 792 EDFRQTYKKDHPNNKSVAAVGKAGGEKWKSLSDSEKAPFVAKADKRKVEYEKTMKAYNKK 971
EDFR T+KK++PN K+V+AVGKAGG+KWKS+S +EKAP+ KA KRK EYEK M AYNK
Sbjct: 65 EDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKN 124
Query: 972 LEEGPKEDEE 1001
LEEG E E+
Sbjct: 125 LEEGSDESEK 134
>TAIR9_protein||AT3G51880.3 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 179
Score = 138 bits (346), Expect = 1e-032
Identities = 74/130 (56%), Positives = 89/130 (68%), Gaps = 9/130 (6%)
Frame = +3
Query: 615 TYDLLRQDSSMKGGKSKTETRSSKLSVAKKPAKAAGR-SKAAAKDPNKPKRPASAFFVFM 791
T + L+ K GK K + A+KP K R K A KDPNKPKR SAFFVF+
Sbjct: 13 TKEALKPVDDRKVGKRK--------APAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVFL 64
Query: 792 EDFRQTYKKDHPNNKSVAAVGKAGGEKWKSLSDSEKAPFVAKADKRKVEYEKTMKAYNKK 971
EDFR T+KK++PN K+V+AVGKAGG+KWKS+S +EKAP+ KA KRK EYEK M AYNK
Sbjct: 65 EDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKN 124
Query: 972 LEEGPKEDEE 1001
LEEG E E+
Sbjct: 125 LEEGSDESEK 134
>TAIR9_protein||AT2G17560.1 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 139
Score = 131 bits (329), Expect = 1e-030
Identities = 63/121 (52%), Positives = 86/121 (71%), Gaps = 3/121 (2%)
Frame = +3
Query: 654 GKSKTETRSSKLSVAKKPAKAAGRSKAAAKDPNKPKRPASAFFVFMEDFRQTYKKDHPNN 833
G+SK E S+ + + KA ++K KDPN+PKRP SAFFVF+EDFR+ + +PNN
Sbjct: 4 GESKAEATSTDQRLKTRGRKAGKKTK---KDPNQPKRPPSAFFVFLEDFRKEFNLANPNN 60
Query: 834 KSVAAVGKAGGEKWKSLSDSEKAPFVAKADKRKVEYEKTMKAYNKKLEEGPKEDEEESDK 1013
KSVA VGKA G +WK+++D +KAP+VAKA+ RK EY K ++ YN KL G +E++SDK
Sbjct: 61 KSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNREEDDSDK 120
Query: 1014 S 1016
S
Sbjct: 121 S 121
>TAIR9_protein||AT2G17560.2 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 139
Score = 131 bits (329), Expect = 1e-030
Identities = 63/121 (52%), Positives = 86/121 (71%), Gaps = 3/121 (2%)
Frame = +3
Query: 654 GKSKTETRSSKLSVAKKPAKAAGRSKAAAKDPNKPKRPASAFFVFMEDFRQTYKKDHPNN 833
G+SK E S+ + + KA ++K KDPN+PKRP SAFFVF+EDFR+ + +PNN
Sbjct: 4 GESKAEATSTDQRLKTRGRKAGKKTK---KDPNQPKRPPSAFFVFLEDFRKEFNLANPNN 60
Query: 834 KSVAAVGKAGGEKWKSLSDSEKAPFVAKADKRKVEYEKTMKAYNKKLEEGPKEDEEESDK 1013
KSVA VGKA G +WK+++D +KAP+VAKA+ RK EY K ++ YN KL G +E++SDK
Sbjct: 61 KSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNREEDDSDK 120
Query: 1014 S 1016
S
Sbjct: 121 S 121
>TAIR9_protein||AT2G17560.3 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 135
Score = 131 bits (329), Expect = 1e-030
Identities = 63/121 (52%), Positives = 86/121 (71%), Gaps = 3/121 (2%)
Frame = +3
Query: 654 GKSKTETRSSKLSVAKKPAKAAGRSKAAAKDPNKPKRPASAFFVFMEDFRQTYKKDHPNN 833
G+SK E S+ + + KA ++K KDPN+PKRP SAFFVF+EDFR+ + +PNN
Sbjct: 4 GESKAEATSTDQRLKTRGRKAGKKTK---KDPNQPKRPPSAFFVFLEDFRKEFNLANPNN 60
Query: 834 KSVAAVGKAGGEKWKSLSDSEKAPFVAKADKRKVEYEKTMKAYNKKLEEGPKEDEEESDK 1013
KSVA VGKA G +WK+++D +KAP+VAKA+ RK EY K ++ YN KL G +E++SDK
Sbjct: 61 KSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNREEDDSDK 120
Query: 1014 S 1016
S
Sbjct: 121 S 121
>TAIR9_protein||AT4G35570.1 | Symbols: HMGB5, NFD5, HMGD, NFD05 | HMGB5 (HIGH
MOBILITY GROUP B 5); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor |
chr4:16887363-16888184 REVERSE
Length = 126
Score = 106 bits (264), Expect = 3e-023
Identities = 47/94 (50%), Positives = 70/94 (74%), Gaps = 2/94 (2%)
Frame = +3
Query: 741 KDPNKPKRPASAFFVFMEDFRQTYKKDHPNNKSVAAVGKAGGEKWKSLSDSEKAPFVAKA 920
KDPN+PK+P S FFVF++DFR+ + +P+NKSV VG+A G+KWK++++ E+APFVAK+
Sbjct: 29 KDPNRPKKPPSPFFVFLDDFRKEFNLANPDNKSVGNVGRAAGKKWKTMTEEERAPFVAKS 88
Query: 921 DKRKVEYEKTMKAYNKKLEEGPKE--DEEESDKS 1016
+K EY TM+ YN +L G K D+E+ +K+
Sbjct: 89 QSKKTEYAVTMQQYNMELANGNKTTGDDEKQEKA 122
>TAIR9_protein||AT2G27775.1 | Symbols: | unknown protein |
chr2:11842618-11843254 REVERSE
Length = 101
Score = 104 bits (258), Expect = 2e-022
Identities = 62/103 (60%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Frame = -2
Query: 573 MSARSIASRSTSILRS----ATRRSLISPPRPRISSPNPNSSSSPLRQTRIESSSAPRFM 406
M+A IASRS + +RS AT R+LIS R R S PNPN +S + S PR +
Sbjct: 1 MAAIGIASRSATFMRSINRTATARNLIS-SRARPSVPNPNFTSPRFNTSSRIEGSVPR-L 58
Query: 405 LRRELSTHQPFHSVVAAACLVSKLPSDLTSYEGRFANYVSPI* 277
LRRELST QPFHS +AAACLVSKLPSD+TS EGRFANY+SPI*
Sbjct: 59 LRRELSTQQPFHSTIAAACLVSKLPSDVTSPEGRFANYLSPI* 101
>TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcription factor |
chr5:7888712-7890111 REVERSE
Length = 242
Score = 88 bits (216), Expect = 1e-017
Identities = 49/123 (39%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Frame = +3
Query: 657 KSKTETRSSKLSVAKKP--AKAAGRSKAAAKDPNKPKRPASAFFVFMEDFRQTYKKDHPN 830
K K + S KP K K ++ NKPKRP +AFF+FM DFR+T+K +H N
Sbjct: 80 KKKPAEKKKTTSDGPKPKRLKKTNDEKKSSSTSNKPKRPLTAFFIFMSDFRKTFKSEH-N 138
Query: 831 NKSVAAVGKAGGEKWKSLSDSEKAPFVAKADKRKVEYEKTMKAYNKKLEEGPKEDEEESD 1010
K GGEKWKSL++ EK ++ KA + K EY K++++ + EE EDEE+
Sbjct: 139 GSLAKDAAKIGGEKWKSLTEEEKKVYLDKAAELKAEYNKSLESNDADEEE---EDEEKQS 195
Query: 1011 KSV 1019
V
Sbjct: 196 DDV 198
>TAIR9_protein||AT2G34450.1 | Symbols: | high mobility group (HMG1/2) family
protein | chr2:14527918-14529448 REVERSE
Length = 152
Score = 87 bits (213), Expect = 3e-017
Identities = 44/123 (35%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Frame = +3
Query: 642 SMKGGKSKTETRSSKLSVAKKPAKAAGRSKAAAKDPNKPKRPASAFFVFMEDFRQTYKKD 821
S +G + T R L +KP K + + K PK+PA+AFF F++DFR+ Y+++
Sbjct: 29 SSEGARRSTRLR---LQPLRKP-KTSPKKKPVKLQTKMPKKPATAFFFFLDDFRKQYQEE 84
Query: 822 HPNNKSVAAVGKAGGEKWKSLSDSEKAPFVAKADKRKVEYEKTMKAYNKKLEEGPKEDEE 1001
+P+ KS+ +GK GEKWK+++ EK + A +++ E+ + M Y K++E G DE
Sbjct: 85 NPDVKSMREIGKTCGEKWKTMTYEEKVKYYDIATEKREEFHRAMTEYTKRMESG-AHDES 143
Query: 1002 ESD 1010
E+D
Sbjct: 144 ETD 146
>TAIR9_protein||AT2G27775.2 | Symbols: | unknown protein |
chr2:11842819-11843254 REVERSE
Length = 113
Score = 87 bits (213), Expect = 3e-017
Identities = 54/93 (58%), Positives = 63/93 (67%), Gaps = 6/93 (6%)
Frame = -2
Query: 573 MSARSIASRSTSILRS----ATRRSLISPPRPRISSPNPNSSSSPLRQTRIESSSAPRFM 406
M+A IASRS + +RS AT R+LIS R R S PNPN +S + S PR +
Sbjct: 1 MAAIGIASRSATFMRSINRTATARNLIS-SRARPSVPNPNFTSPRFNTSSRIEGSVPR-L 58
Query: 405 LRRELSTHQPFHSVVAAACLVSKLPSDLTSYEG 307
LRRELST QPFHS +AAACLVSKLPSD+TS EG
Sbjct: 59 LRRELSTQQPFHSTIAAACLVSKLPSDVTSPEG 91
>TAIR9_protein||AT2G34450.2 | Symbols: | high mobility group (HMG1/2) family
protein | chr2:14527918-14529448 REVERSE
Length = 153
Score = 82 bits (202), Expect = 5e-016
Identities = 44/124 (35%), Positives = 73/124 (58%), Gaps = 6/124 (4%)
Frame = +3
Query: 642 SMKGGKSKTETRSSKLSVAKKPAKAAGRSKAAAKDPNKPKRPASAFFVFMEDFRQTYKKD 821
S +G + T R L +KP K + + K PK+PA+AFF F++DFR+ Y+++
Sbjct: 29 SSEGARRSTRLR---LQPLRKP-KTSPKKKPVKLQTKMPKKPATAFFFFLDDFRKQYQEE 84
Query: 822 HPNNKSV-AAVGKAGGEKWKSLSDSEKAPFVAKADKRKVEYEKTMKAYNKKLEEGPKEDE 998
+P+ KS+ +GK GEKWK+++ EK + A +++ E+ + M Y K++E G DE
Sbjct: 85 NPDVKSMREVIGKTCGEKWKTMTYEEKVKYYDIATEKREEFHRAMTEYTKRMESG-AHDE 143
Query: 999 EESD 1010
E+D
Sbjct: 144 SETD 147
>TAIR9_protein||AT4G23800.1 | Symbols: | high mobility group (HMG1/2) family
protein | chr4:12390228-12392516 FORWARD
Length = 457
Score = 73 bits (178), Expect = 3e-013
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Frame = +3
Query: 741 KDPNKPKRPASAFFVFMEDFRQTYKKDHPNNKSVAAVGKAGGEKWKSLSDSEKAPFVAKA 920
KDP KPK P SAF V+ + R +++ NKSV V K GE+WK+LSD +KAP+ A
Sbjct: 250 KDPLKPKHPVSAFLVYANERRAALREE---NKSVVEVAKITGEEWKNLSDKKKAPYEKVA 306
Query: 921 DKRKVEYEKTMKAYNKKLEE---GPKEDEEE 1004
K K Y + M+ Y + EE K++EEE
Sbjct: 307 KKNKETYLQAMEEYKRTKEEEALSQKKEEEE 337
>TAIR9_protein||AT4G11080.1 | Symbols: | high mobility group (HMG1/2) family
protein | chr4:6760898-6763272 REVERSE
Length = 447
Score = 70 bits (169), Expect = 4e-012
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Frame = +3
Query: 741 KDPNKPKRPASAFFVFMEDFRQTYKKDHPNNKSVAAVGKAGGEKWKSLSDSEKAPFVAKA 920
KDP KPK+P SA+ ++ + R K + NKSV V K GE+WK+LS+ +KAP+ A
Sbjct: 241 KDPLKPKQPISAYLIYANERRAALKGE---NKSVIEVAKMAGEEWKNLSEEKKAPYDQMA 297
Query: 921 DKRKVEYEKTMKAYNKKLEE---GPKEDEEE 1004
K K Y + M+ Y + EE K++EEE
Sbjct: 298 KKNKEIYLQEMEGYKRTKEEEAMSQKKEEEE 328
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,179,765,564
Number of Sequences: 33410
Number of Extensions: 9179765564
Number of Successful Extensions: 317221290
Number of sequences better than 0.0: 0
|
