BLASTX 7.6.2
Query= UN17439 /QuerySize=605
(604 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q54PB2|MRD1_DICDI Multiple RNA-binding domain-containing prot... 70 7e-012
sp|Q4WJT7|MRD1_ASPFU Multiple RNA-binding domain-containing prot... 68 4e-011
sp|Q5BGA9|MRD1_EMENI Multiple RNA-binding domain-containing prot... 67 6e-011
sp|Q8R3C6|RBM19_MOUSE Probable RNA-binding protein 19 OS=Mus mus... 61 4e-009
sp|Q9Y4C8|RBM19_HUMAN Probable RNA-binding protein 19 OS=Homo sa... 61 5e-009
sp|Q5KJL5|MRD1_CRYNE Multiple RNA-binding domain-containing prot... 60 7e-009
sp|Q56JZ7|ZCRB1_BOVIN Zinc finger CCHC-type and RNA-binding moti... 59 2e-008
sp|Q9CZ96|ZCRB1_MOUSE Zinc finger CCHC-type and RNA-binding moti... 59 2e-008
sp|Q499V6|ZCRB1_RAT Zinc finger CCHC-type and RNA-binding motif-... 59 2e-008
sp|Q6DJI9|ZCRB1_XENLA Zinc finger CCHC-type and RNA-binding moti... 59 3e-008
sp|Q8TBF4|ZCRB1_HUMAN Zinc finger CCHC-type and RNA-binding moti... 58 4e-008
sp|Q42404|RU17_ARATH U1 small nuclear ribonucleoprotein 70 kDa O... 57 6e-008
sp|Q1DXH0|PABP_COCIM Polyadenylate-binding protein, cytoplasmic ... 55 2e-007
sp|Q4PC17|MRD1_USTMA Multiple RNA-binding domain-containing prot... 54 7e-007
sp|Q9ZQA8|PABPX_ARATH Probable polyadenylate-binding protein At2... 54 9e-007
sp|O74400|YOCE_SCHPO Uncharacterized RNA-binding protein C4F6.14... 53 1e-006
sp|P17133|RU17_DROME U1 small nuclear ribonucleoprotein 70 kDa O... 52 3e-006
sp|Q3SZM1|MK67I_BOVIN MKI67 FHA domain-interacting nucleolar pho... 51 6e-006
sp|Q9BYG3|MK67I_HUMAN MKI67 FHA domain-interacting nucleolar pho... 50 7e-006
sp|Q66II8|RU17_XENTR U1 small nuclear ribonucleoprotein 70 kDa O... 50 1e-005
>sp|Q54PB2|MRD1_DICDI Multiple RNA-binding domain-containing protein 1
OS=Dictyostelium discoideum GN=mrd1 PE=3 SV=1
Length = 895
Score = 70 bits (171), Expect = 7e-012
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
Frame = +1
Query: 136 ASKIMVRNLPFSTSEDFLQKEFSAFGEIAEVKLVKDESMKRSKGYAFIQYMSQDDAFLAI 315
+ +I VRNL +ST E+ L+K FS FG+I+E+ + D K+SKG AFI Y+ ++A A+
Sbjct: 360 SGRIFVRNLSYSTKEEDLEKVFSKFGKISEIHIPIDYDSKKSKGIAFILYLIPENAVQAL 419
Query: 316 ETMDRRMYNGRMIYIDIAKPGK 381
MD +++ GR+I++ PGK
Sbjct: 420 NDMDGKVFQGRLIHV---LPGK 438
>sp|Q4WJT7|MRD1_ASPFU Multiple RNA-binding domain-containing protein 1
OS=Aspergillus fumigatus GN=mrd1 PE=3 SV=1
Length = 825
Score = 68 bits (164), Expect = 4e-011
Identities = 30/86 (34%), Positives = 54/86 (62%)
Frame = +1
Query: 103 KIQASLSNYPLASKIMVRNLPFSTSEDFLQKEFSAFGEIAEVKLVKDESMKRSKGYAFIQ 282
++ ++ + L+S++ VRNLP+ SE L+ FS FG+I E+ + D SKG+A++Q
Sbjct: 289 EVDTNIEHIRLSSRLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQ 348
Query: 283 YMSQDDAFLAIETMDRRMYNGRMIYI 360
Y+ D A A + +D + + GR+++I
Sbjct: 349 YIEPDAAVQAYKELDGKHFQGRLMHI 374
>sp|Q5BGA9|MRD1_EMENI Multiple RNA-binding domain-containing protein 1
OS=Emericella nidulans GN=mrd1 PE=3 SV=1
Length = 819
Score = 67 bits (163), Expect = 6e-011
Identities = 29/90 (32%), Positives = 53/90 (58%)
Frame = +1
Query: 91 PRLPKIQASLSNYPLASKIMVRNLPFSTSEDFLQKEFSAFGEIAEVKLVKDESMKRSKGY 270
P ++ ++ N +++++ VRNL + T E L+ FS FG+I E+ + D SKG+
Sbjct: 279 PTAAEVDTNIENIRISARLFVRNLSYETKESELEPVFSPFGKIEEIHVAFDTRFTTSKGF 338
Query: 271 AFIQYMSQDDAFLAIETMDRRMYNGRMIYI 360
A++QY D A A +D +++ GR+++I
Sbjct: 339 AYVQYADPDAAVEAYRNLDGKIFQGRLLHI 368
>sp|Q8R3C6|RBM19_MOUSE Probable RNA-binding protein 19 OS=Mus musculus GN=Rbm19
PE=1 SV=1
Length = 952
Score = 61 bits (147), Expect = 4e-009
Identities = 30/97 (30%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Frame = +1
Query: 136 ASKIMVRNLPFSTSEDFLQKEFSAFGEIAEVKLVKDESMKRSKGYAFIQYMSQDDAFLAI 315
+ ++ VRNL +++SE+ L+K FSA+G ++E+ D K+ KG+AF+ +M + A A
Sbjct: 399 SGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAY 458
Query: 316 ETMDRRMYNGRMIYIDIAKPGKRDFQQQPRTSGPPEK 426
+D +++ GRM+++ + K++ Q+ G K
Sbjct: 459 AEVDGQVFQGRMLHV-LPSTIKKEASQEANAPGSSYK 494
>sp|Q9Y4C8|RBM19_HUMAN Probable RNA-binding protein 19 OS=Homo sapiens GN=RBM19
PE=1 SV=2
Length = 960
Score = 61 bits (146), Expect = 5e-009
Identities = 26/75 (34%), Positives = 50/75 (66%)
Frame = +1
Query: 136 ASKIMVRNLPFSTSEDFLQKEFSAFGEIAEVKLVKDESMKRSKGYAFIQYMSQDDAFLAI 315
+ ++ VRNLP++++E+ L+K FS +G ++E+ D K+ KG+AFI +M + A A
Sbjct: 401 SGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAY 460
Query: 316 ETMDRRMYNGRMIYI 360
+D +++ GRM+++
Sbjct: 461 SEVDGQVFQGRMLHV 475
>sp|Q5KJL5|MRD1_CRYNE Multiple RNA-binding domain-containing protein 1
OS=Cryptococcus neoformans GN=MRD1 PE=3 SV=1
Length = 769
Score = 60 bits (145), Expect = 7e-009
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Frame = +1
Query: 88 KPRLPKIQASLSNYPLASKIMVRNLPFSTSEDFLQKEFSAFGEIAEVKLVKDESMKRSKG 267
+P P++ A S++ VRNL F T+ + L FS +G I E L ++ G
Sbjct: 204 EPSTPQLSADEQLILSTSRLFVRNLAFITTSESLSSHFSTYGRIDECHLPVSQTTGEPLG 263
Query: 268 YAFIQYMSQDDAFLAIETMDRRMYNGRMIYI--DIAKPGK 381
AF+Q+ + +DA A + +D+ ++ GR++++ AKPG+
Sbjct: 264 TAFLQFHNAEDALAAYKALDKTIFQGRLLHVLPGRAKPGQ 303
>sp|Q56JZ7|ZCRB1_BOVIN Zinc finger CCHC-type and RNA-binding motif-containing
protein 1 OS=Bos taurus GN=ZCRB1 PE=2 SV=1
Length = 217
Score = 59 bits (142), Expect = 2e-008
Identities = 29/80 (36%), Positives = 48/80 (60%)
Frame = +1
Query: 130 PLASKIMVRNLPFSTSEDFLQKEFSAFGEIAEVKLVKDESMKRSKGYAFIQYMSQDDAFL 309
P S + V NLPFS + + L + FS +G++ +V ++KD+ +RSKG AFI ++ +D A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRRSKGVAFILFLDKDSAQN 66
Query: 310 AIETMDRRMYNGRMIYIDIA 369
++ + GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>sp|Q9CZ96|ZCRB1_MOUSE Zinc finger CCHC-type and RNA-binding motif-containing
protein 1 OS=Mus musculus GN=Zcrb1 PE=1 SV=1
Length = 217
Score = 59 bits (142), Expect = 2e-008
Identities = 28/80 (35%), Positives = 48/80 (60%)
Frame = +1
Query: 130 PLASKIMVRNLPFSTSEDFLQKEFSAFGEIAEVKLVKDESMKRSKGYAFIQYMSQDDAFL 309
P S + V NLPFS + + L + FS +G++ +V ++KD+ ++SKG AFI ++ +D A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALN 66
Query: 310 AIETMDRRMYNGRMIYIDIA 369
++ + GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>sp|Q499V6|ZCRB1_RAT Zinc finger CCHC-type and RNA-binding motif-containing
protein 1 OS=Rattus norvegicus GN=Zcrb1 PE=2 SV=1
Length = 217
Score = 59 bits (142), Expect = 2e-008
Identities = 28/80 (35%), Positives = 48/80 (60%)
Frame = +1
Query: 130 PLASKIMVRNLPFSTSEDFLQKEFSAFGEIAEVKLVKDESMKRSKGYAFIQYMSQDDAFL 309
P S + V NLPFS + + L + FS +G++ +V ++KD+ ++SKG AFI ++ +D A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSALN 66
Query: 310 AIETMDRRMYNGRMIYIDIA 369
++ + GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>sp|Q6DJI9|ZCRB1_XENLA Zinc finger CCHC-type and RNA-binding motif-containing
protein 1 OS=Xenopus laevis GN=zcrb1 PE=2 SV=1
Length = 218
Score = 59 bits (140), Expect = 3e-008
Identities = 27/85 (31%), Positives = 50/85 (58%)
Frame = +1
Query: 130 PLASKIMVRNLPFSTSEDFLQKEFSAFGEIAEVKLVKDESMKRSKGYAFIQYMSQDDAFL 309
P S + V NLPFS + + L + FS +G++ +V ++KD+ ++SKG +F+ ++ ++ A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLHRIFSKYGKVVKVTILKDKDSRKSKGVSFVLFLDKESAQN 66
Query: 310 AIETMDRRMYNGRMIYIDIAKPGKR 384
+ ++ + GR I IAK R
Sbjct: 67 CVRGLNNKQLFGRAIKASIAKDNGR 91
>sp|Q8TBF4|ZCRB1_HUMAN Zinc finger CCHC-type and RNA-binding motif-containing
protein 1 OS=Homo sapiens GN=ZCRB1 PE=1 SV=2
Length = 217
Score = 58 bits (139), Expect = 4e-008
Identities = 28/80 (35%), Positives = 48/80 (60%)
Frame = +1
Query: 130 PLASKIMVRNLPFSTSEDFLQKEFSAFGEIAEVKLVKDESMKRSKGYAFIQYMSQDDAFL 309
P S + V NLPFS + + L + FS +G++ +V ++KD+ ++SKG AFI ++ +D A
Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQN 66
Query: 310 AIETMDRRMYNGRMIYIDIA 369
++ + GR+I IA
Sbjct: 67 CTRAINNKQLFGRVIKASIA 86
>sp|Q42404|RU17_ARATH U1 small nuclear ribonucleoprotein 70 kDa OS=Arabidopsis
thaliana GN=RNU1 PE=1 SV=1
Length = 427
Score = 57 bits (137), Expect = 6e-008
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +1
Query: 145 IMVRNLPFSTSEDFLQKEFSAFGEIAEVKLVKDESMKRSKGYAFIQYMSQDDAFLAIETM 324
+ V L + +SE +++EF ++G I V LV D+ + KGYAFI+YM D A +
Sbjct: 140 LFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQA 199
Query: 325 DRRMYNGRMIYIDIAKPGKRDFQQQPRTSG 414
D + +GR + +D+ + G+ +PR G
Sbjct: 200 DGQKIDGRRVLVDVER-GRTVPNWRPRRLG 228
>sp|Q1DXH0|PABP_COCIM Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Coccidioides immitis GN=PAB1 PE=3 SV=1
Length = 768
Score = 55 bits (132), Expect = 2e-007
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Frame = +1
Query: 88 KPRLPKIQASLSNYPLASKIMVRNLPFSTSEDFLQKEFSAFGEIAEVKLVKDESMKRSKG 267
K R K + +N+ + + V+N+ T+E+ + F FGEI L +D +S+G
Sbjct: 222 KDRQSKFEEMKANF---TNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRG 278
Query: 268 YAFIQYMSQDDAFLAIETMDRRMYNGRMIYIDIAK 372
+ F+ + S D+A A+E ++ + + G+ +Y+ A+
Sbjct: 279 FGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQ 313
>sp|Q4PC17|MRD1_USTMA Multiple RNA-binding domain-containing protein 1
OS=Ustilago maydis GN=MRD1 PE=3 SV=1
Length = 858
Score = 54 bits (128), Expect = 7e-007
Identities = 27/103 (26%), Positives = 48/103 (46%)
Frame = +1
Query: 52 FVASSTSLSSYAKPRLPKIQASLSNYPLASKIMVRNLPFSTSEDFLQKEFSAFGEIAEVK 231
F + A+ K Q + + ++ +RNLPF+ S D + F +FG + +V
Sbjct: 285 FECKQAEMQRKAQQAAEKDQKLVDQIMESGRLFIRNLPFAASGDEILAFFESFGTVKQVH 344
Query: 232 LVKDESMKRSKGYAFIQYMSQDDAFLAIETMDRRMYNGRMIYI 360
+ D+ K SKG AF+ + A A D + GR++++
Sbjct: 345 IPLDKQTKASKGLAFVSFSDPAHALAAYRAKDGSTFQGRLLHL 387
>sp|Q9ZQA8|PABPX_ARATH Probable polyadenylate-binding protein At2g36660
OS=Arabidopsis thaliana GN=At2g36660 PE=2 SV=1
Length = 609
Score = 54 bits (127), Expect = 9e-007
Identities = 29/83 (34%), Positives = 47/83 (56%)
Frame = +1
Query: 112 ASLSNYPLASKIMVRNLPFSTSEDFLQKEFSAFGEIAEVKLVKDESMKRSKGYAFIQYMS 291
+S S+ P+ + + V +L S +E L F+ F + V+L KD S RS Y + ++S
Sbjct: 15 SSGSSSPVTASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLS 74
Query: 292 QDDAFLAIETMDRRMYNGRMIYI 360
+ DA LAIE + + NG+MI +
Sbjct: 75 RQDANLAIEKKNNSLLNGKMIRV 97
>sp|O74400|YOCE_SCHPO Uncharacterized RNA-binding protein C4F6.14
OS=Schizosaccharomyces pombe GN=SPBC4F6.14 PE=1 SV=1
Length = 674
Score = 53 bits (126), Expect = 1e-006
Identities = 27/82 (32%), Positives = 43/82 (52%)
Frame = +1
Query: 139 SKIMVRNLPFSTSEDFLQKEFSAFGEIAEVKLVKDESMKRSKGYAFIQYMSQDDAFLAIE 318
S + VRNL F T +D L FS G I +V + ++GY F+ + +DA A +
Sbjct: 5 STLFVRNLAFQTKQDDLTNFFSDVGPIKHAVVVTNPETGENRGYGFVTFSMLEDAQRAAK 64
Query: 319 TMDRRMYNGRMIYIDIAKPGKR 384
+ + +GR++ +D A P KR
Sbjct: 65 ELKNKKLHGRILRLDFATPRKR 86
>sp|P17133|RU17_DROME U1 small nuclear ribonucleoprotein 70 kDa OS=Drosophila
melanogaster GN=snRNP70K PE=1 SV=2
Length = 448
Score = 52 bits (122), Expect = 3e-006
Identities = 21/76 (27%), Positives = 43/76 (56%)
Frame = +1
Query: 145 IMVRNLPFSTSEDFLQKEFSAFGEIAEVKLVKDESMKRSKGYAFIQYMSQDDAFLAIETM 324
+ + + + TSE L++EF +G I ++ L+ D+ + KGYAFI+Y + D A +
Sbjct: 104 LFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHA 163
Query: 325 DRRMYNGRMIYIDIAK 372
D + + + + +D+ +
Sbjct: 164 DGKKIDSKRVLVDVER 179
>sp|Q3SZM1|MK67I_BOVIN MKI67 FHA domain-interacting nucleolar phosphoprotein
OS=Bos taurus GN=MKI67IP PE=2 SV=1
Length = 296
Score = 51 bits (120), Expect = 6e-006
Identities = 26/84 (30%), Positives = 44/84 (52%)
Frame = +1
Query: 130 PLASKIMVRNLPFSTSEDFLQKEFSAFGEIAEVKLVKDESMKRSKGYAFIQYMSQDDAFL 309
P I V +LP + E ++ FS FG + +L + + SKGY F+++ S+D A +
Sbjct: 42 PTPGVIYVGHLPPTLYETQIRAYFSQFGTVTRFRLSRSKKTGNSKGYGFVEFESEDVAKI 101
Query: 310 AIETMDRRMYNGRMIYIDIAKPGK 381
A ETM+ ++ R++ P K
Sbjct: 102 AAETMNNYLFGERLLKCHFIPPEK 125
>sp|Q9BYG3|MK67I_HUMAN MKI67 FHA domain-interacting nucleolar phosphoprotein
OS=Homo sapiens GN=MKI67IP PE=1 SV=1
Length = 293
Score = 50 bits (119), Expect = 7e-006
Identities = 25/79 (31%), Positives = 42/79 (53%)
Frame = +1
Query: 145 IMVRNLPFSTSEDFLQKEFSAFGEIAEVKLVKDESMKRSKGYAFIQYMSQDDAFLAIETM 324
+ VR+LP E + FS FG + +L + + SKGYAF+++ S+D A + ETM
Sbjct: 47 VYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETM 106
Query: 325 DRRMYNGRMIYIDIAKPGK 381
+ ++ R++ P K
Sbjct: 107 NNYLFGERLLECHFMPPEK 125
>sp|Q66II8|RU17_XENTR U1 small nuclear ribonucleoprotein 70 kDa OS=Xenopus
tropicalis GN=snrnp70 PE=2 SV=1
Length = 471
Score = 50 bits (118), Expect = 1e-005
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +1
Query: 145 IMVRNLPFSTSEDFLQKEFSAFGEIAEVKLVKDESMKRSKGYAFIQYMSQDDAFLAIETM 324
+ V + + T+E L++EF +G I + +V ++ + +GYAFI+Y + D A +
Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHSAYKHA 164
Query: 325 DRRMYNGRMIYIDIAKPGKRDFQQQPRTSG 414
D + +GR + +D+ + G+ +PR G
Sbjct: 165 DGKKIDGRRVLVDVER-GRTVKGWRPRRLG 193
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,471,325,924
Number of Sequences: 518415
Number of Extensions: 72471325924
Number of Successful Extensions: 505334272
Number of sequences better than 0.0: 0
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