BLASTX 7.6.2
Query= UN17563 /QuerySize=776
(775 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G05590.1 | Symbols: RPL18 | RPL18 (RIBOSOMAL P... 349 1e-096
TAIR9_protein||AT5G27850.1 | Symbols: | 60S ribosomal protein L... 346 1e-095
TAIR9_protein||AT2G47570.1 | Symbols: | 60S ribosomal protein L... 218 5e-057
>TAIR9_protein||AT3G05590.1 | Symbols: RPL18 | RPL18 (RIBOSOMAL PROTEIN L18);
structural constituent of ribosome | chr3:1621511-1622775 FORWARD
Length = 188
Score = 349 bits (894), Expect = 1e-096
Identities = 177/188 (94%), Positives = 181/188 (96%)
Frame = +1
Query: 19 MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRTGSKFDAVILKRLFMSKVNKA 198
MGIDLIAGGKSKKTKRTAPKSDDVYLKL VKLYRFLVRRT SKF+ VILKRLFMSKVNKA
Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 60
Query: 199 PLSLSKLVEFMNGKDGKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 378
PLSLS+LVEFM GK+ KIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL
Sbjct: 61 PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120
Query: 379 TFDQLALVAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFEKARGKR 558
TFDQLAL APLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVR+KGRKFEKARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 180
Query: 559 KSRGFKV* 582
KSRGFKV*
Sbjct: 181 KSRGFKV* 188
>TAIR9_protein||AT5G27850.1 | Symbols: | 60S ribosomal protein L18 (RPL18C) |
chr5:9873169-9874297 FORWARD
Length = 188
Score = 346 bits (886), Expect = 1e-095
Identities = 176/188 (93%), Positives = 181/188 (96%)
Frame = +1
Query: 19 MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRTGSKFDAVILKRLFMSKVNKA 198
MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRR+ S F+AVILKRLFMSKVNKA
Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 60
Query: 199 PLSLSKLVEFMNGKDGKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 378
PLSLS+LVEFM GKD KIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL
Sbjct: 61 PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120
Query: 379 TFDQLALVAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFEKARGKR 558
TFDQLAL APLGQNTVLLRGPKNSREAVKHFGPAPGVPHS++KPYVR KGRKFEKARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 180
Query: 559 KSRGFKV* 582
KSRGFKV*
Sbjct: 181 KSRGFKV* 188
>TAIR9_protein||AT2G47570.1 | Symbols: | 60S ribosomal protein L18 (RPL18A) |
chr2:19515898-19516717 REVERSE
Length = 136
Score = 218 bits (553), Expect = 5e-057
Identities = 105/136 (77%), Positives = 121/136 (88%), Gaps = 1/136 (0%)
Frame = +1
Query: 178 MSKVNKAPLSLSKLVEFMNGKDGKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIE 357
MSKVNKAPLSLS+LV +M+GKDGKIAV+VGT+TDD+R+ ++PA+ VTALRFTE ARARI
Sbjct: 1 MSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIH 60
Query: 358 KAGGECLTFDQLALVAPL-GQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRK 534
KAGGECLTFDQLAL P +NTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVR G+K
Sbjct: 61 KAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKK 120
Query: 535 FEKARGKRKSRGFKV* 582
E ARG+R+SRGFKV*
Sbjct: 121 IEIARGRRRSRGFKV* 136
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,222,801,766
Number of Sequences: 33410
Number of Extensions: 9222801766
Number of Successful Extensions: 317284492
Number of sequences better than 0.0: 0
|