BLASTX 7.6.2
Query= UN17583 /QuerySize=787
(786 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G30620.1 | Symbols: | histone H1.2 | chr2:130... 159 2e-039
TAIR9_protein||AT1G06760.1 | Symbols: | histone H1, putative | ... 139 2e-033
TAIR9_protein||AT3G22120.1 | Symbols: CWLP | CWLP (CELL WALL-PLA... 47 9e-006
>TAIR9_protein||AT2G30620.1 | Symbols: | histone H1.2 | chr2:13045360-13046267
FORWARD
Length = 274
Score = 159 bits (402), Expect = 2e-039
Identities = 117/181 (64%), Positives = 124/181 (68%), Gaps = 39/181 (21%)
Frame = +1
Query: 34 ERLVASGKLVKVKGSFKLPSATKSTAVAAPAAPKP-APVKKKAT-VAKPKA--------- 180
+RLVAS KLVKVK SFK+PSA + A PKP APVKKKAT VAKPK
Sbjct: 111 KRLVASEKLVKVKASFKIPSARSA------ATPKPAAPVKKKATVVAKPKGKVAAAVAPA 164
Query: 181 -AKPAAKGSKK------TKAAVAVKPKAAKVVAAKPKPKTKTVAAVSKTKAVAAAAKPKA 339
AK AAKG+KK KA V KPK AKV AA KPK+K+VAAVSKTKAV AAKPKA
Sbjct: 165 KAKAAAKGTKKPAAKVVAKAKVTAKPK-AKVTAA--KPKSKSVAAVSKTKAV--AAKPKA 219
Query: 340 KERPAKAARTSTRTSPGKKKAAPPAKKAAAAVTKKAKAKAPAKSVKAKAVKSPAKRVSAR 519
KERPAKA+RTSTRTSPGKK AAP K AVTK KAPAKSVK VKSPAKR S R
Sbjct: 220 KERPAKASRTSTRTSPGKKVAAPAKK---VAVTK----KAPAKSVK---VKSPAKRASTR 269
Query: 520 K 522
K
Sbjct: 270 K 270
Score = 115 bits (286), Expect = 5e-026
Identities = 83/164 (50%), Positives = 94/164 (57%), Gaps = 19/164 (11%)
Frame = +1
Query: 34 ERLVASGKLVKVKGSFKLPSATKSTAVAAPAAPKPAPVKKKATVAKPKAAKPAAKGSKK- 210
E+LV K+ + + + V A P K A P AK AAKG+KK
Sbjct: 117 EKLVKVKASFKIPSARSAATPKPAAPVKKKATVVAKPKGKVAAAVAPAKAKAAAKGTKKP 176
Query: 211 -----TKAAVAVKPKAAKVVAAKPKPKTKTVAAVSKTKAVAAAAKPKAKERPAKAARTST 375
KA V KPK AKV AA KPK+K+VAAVSKTKAV AAKPKAKERPAKA+RTST
Sbjct: 177 AAKVVAKAKVTAKPK-AKVTAA--KPKSKSVAAVSKTKAV--AAKPKAKERPAKASRTST 231
Query: 376 RTSPGKKKAAPPAKKAAAAVTKKA-----KAKAPAKSVKAKAVK 492
RTSPGKK AAP K AVTKKA K K+PAK + K
Sbjct: 232 RTSPGKKVAAPAKK---VAVTKKAPAKSVKVKSPAKRASTRKAK 272
Score = 60 bits (143), Expect = 2e-009
Identities = 58/156 (37%), Positives = 71/156 (45%), Gaps = 20/156 (12%)
Frame = +1
Query: 121 PAAPKPAPVKKKATVAKPKAAK-------PAAKGSKKTKAAVAVKPKAAKVVAAKPKPKT 279
P K V K VA K K P+A+ + K A VK KA V AKPK K
Sbjct: 100 PTFRKLLLVNLKRLVASEKLVKVKASFKIPSARSAATPKPAAPVKKKA--TVVAKPKGKV 157
Query: 280 KTVAAVSKTKAVAAAAKPKAKERPAKAARTSTRTSPGKKKAAPPAKKAAAAVTK------ 441
A +K KA A K A + AKA T+ K AA P K+ AAV+K
Sbjct: 158 AAAVAPAKAKAAAKGTKKPAAKVVAKAKVTA--KPKAKVTAAKPKSKSVAAVSKTKAVAA 215
Query: 442 KAKAK-APAKSVKAKAVKSPAKRVS--ARKVKK*KK 540
K KAK PAK+ + SP K+V+ A+KV KK
Sbjct: 216 KPKAKERPAKASRTSTRTSPGKKVAAPAKKVAVTKK 251
>TAIR9_protein||AT1G06760.1 | Symbols: | histone H1, putative |
chr1:2076687-2077616 REVERSE
Length = 275
Score = 139 bits (349), Expect = 2e-033
Identities = 93/168 (55%), Positives = 102/168 (60%), Gaps = 7/168 (4%)
Frame = +1
Query: 34 ERLVASGKLVKVKGSFKLPSATKSTAVAAPAAPKPAPVKKK-ATVAKPKAAKPAAKGSKK 210
+RLVASGKLVKVK SFKLPSA+ + AA K AP KKK ATVA KA + A S K
Sbjct: 111 KRLVASGKLVKVKASFKLPSASAKASSPKAAAEKSAPAKKKPATVAVTKAKRKVAAAS-K 169
Query: 211 TKAAVAVKPK--AAKVVAAKPKPKTKTVAAVSKTKAVAAAAKPKAKERPAKAARTSTRTS 384
K +AVKPK AAK V AK K K A + TK A AKPKAK RPAKAA+T+ TS
Sbjct: 170 AKKTIAVKPKTAAAKKVTAKAKAKPVPRATAAATKRKAVDAKPKAKARPAKAAKTAKVTS 229
Query: 385 PGKKKAAPPAKKAAAAVTKKAKAKAPAKSVKAKAVKSPAKRVSARKVK 528
P KK A K A A KK K K VK K VKSPAKR S+R K
Sbjct: 230 PAKKAVAATKKVATVATKKKTPVK---KVVKPKTVKSPAKRASSRVKK 274
Score = 50 bits (117), Expect = 2e-006
Identities = 49/151 (32%), Positives = 61/151 (40%), Gaps = 13/151 (8%)
Frame = +1
Query: 4 SHKTSSKKDKERLVASGKLVKVKGSFKLPSATKSTAVAAPAAPKPAPVKKKATVAKPKAA 183
S K SS K A K K + + A + A AA A K VK K AK A
Sbjct: 132 SAKASSPKAAAEKSAPAK--KKPATVAVTKAKRKVA-AASKAKKTIAVKPKTAAAKKVTA 188
Query: 184 KPAAKGSKKTKAAVAVKPKAAKVVAAKPKPKTKTVAAVSKTKAVAAAAKPKAKERPAKAA 363
K AK + AA + K V AKPK K + A K + A K A +
Sbjct: 189 KAKAKPVPRATAAATKR----KAVDAKPKAKARPAKAAKTAKVTSPAKKAVAATKKVATV 244
Query: 364 RTSTRTSPGKKKAAP-----PAKKAAAAVTK 441
T +T P KK P PAK+A++ V K
Sbjct: 245 ATKKKT-PVKKVVKPKTVKSPAKRASSRVKK 274
>TAIR9_protein||AT3G22120.1 | Symbols: CWLP | CWLP (CELL WALL-PLASMA MEMBRANE
LINKER PROTEIN); lipid binding | chr3:7795283-7796287 REVERSE
Length = 335
Score = 47 bits (111), Expect = 9e-006
Identities = 40/126 (31%), Positives = 43/126 (34%), Gaps = 7/126 (5%)
Frame = +1
Query: 121 PAAPKPAPVKKKATVAKPKAAKPAAKGSKKTKAAVAVKPKAAKVVAAKPKPKTKTVAAVS 300
P P PAP K KP PA K K AVKP K KP PK TV
Sbjct: 29 PPKPSPAPHKPPKHPVKP-PKPPAVKPPKPP----AVKPPTPKPPTVKPHPKPPTVKPHP 83
Query: 301 KTKAVAAAAKPKAKERPAKAARTSTRTSPGKKKAAPPAKKAAAAVTKKAKAKAPAKSVKA 480
K V KP + P T P PP K + T K K P + K
Sbjct: 84 KPPTVKPHPKPPTVKPPHPKPPTKPHPHPKPPIVKPPTKPPPS--TPKPPTKPPPSTPKP 141
Query: 481 KAVKSP 498
K P
Sbjct: 142 PTTKPP 147
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,265,933,573
Number of Sequences: 33410
Number of Extensions: 9265933573
Number of Successful Extensions: 317313259
Number of sequences better than 0.0: 0
|