BLASTX 7.6.2
Query= UN17618 /QuerySize=1308
(1307 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G26960.1 | Symbols: | unknown protein | chr3:... 279 4e-075
TAIR9_protein||AT5G41050.1 | Symbols: | unknown protein | chr5:... 231 9e-061
TAIR9_protein||AT3G27000.1 | Symbols: ARP2, ATARP2, WRM | ARP2 (... 154 1e-037
TAIR9_protein||AT5G13140.1 | Symbols: | FUNCTIONS IN: molecular... 136 5e-032
>TAIR9_protein||AT3G26960.1 | Symbols: | unknown protein | chr3:9944859-9945459
REVERSE
Length = 175
Score = 279 bits (712), Expect = 4e-075
Identities = 138/174 (79%), Positives = 154/174 (88%), Gaps = 3/174 (1%)
Frame = +1
Query: 118 EKKLIMFLFVLLQLLLVVNSLSPKHSPAKPK--AEVTVMGFVYCDVCSNNTFSTHSYFMS 291
+K L MFLF+LLQ LL VNSLS KHS KPK AE+T+MGFVYCDVCS N+FS HSYFMS
Sbjct: 3 KKSLTMFLFILLQFLL-VNSLSSKHSSPKPKPDAEITIMGFVYCDVCSKNSFSKHSYFMS 61
Query: 292 GVEVRIVCRFKSASSRTNEMVTFSANRTTNEFGLYKVAITSLDWADVDSLASSCQASLVG 471
GVEVRIVCRFK+ASS T E +TFSANRTTNEFGLYKVAI+SLD ADVDSLASSCQASL+G
Sbjct: 62 GVEVRIVCRFKAASSTTTETITFSANRTTNEFGLYKVAISSLDCADVDSLASSCQASLIG 121
Query: 472 RRSSSDISCNVPGYRTTTDQVVFKSKRSNLCIYGFNALNLRPFKRDLALCGKK* 633
R++ SD SCN+PGYRTTTDQV+FKS++SN C+YGFNALN RPFKRDLALCGKK*
Sbjct: 122 RKNFSDSSCNIPGYRTTTDQVLFKSQQSNSCVYGFNALNFRPFKRDLALCGKK* 175
>TAIR9_protein||AT5G41050.1 | Symbols: | unknown protein |
chr5:16433478-16434076 REVERSE
Length = 173
Score = 231 bits (588), Expect = 9e-061
Identities = 121/177 (68%), Positives = 140/177 (79%), Gaps = 11/177 (6%)
Frame = +1
Query: 115 MEKKLIMFLFVLLQLLLVVNSLSPKHSPAKPKAEVTVMGFVYCDVCSNNTFSTHSYFMSG 294
M++KLIM L LL LL +NSLS KHS AKP ++TVMG VYCDVCSNN+FS HSYF+ G
Sbjct: 1 MKQKLIMLL--LLLQLLSLNSLSLKHSSAKPNGKITVMGLVYCDVCSNNSFSNHSYFIPG 58
Query: 295 VEVRIVCRFKSASSRTNEMVTFSANRTTNEFGLYKVAITSLDW------ADVDSLASSCQ 456
VEVRI+CRF SASSRT EM+TFSANRTTNE GLYK+ ITSL+ A DSL +SCQ
Sbjct: 59 VEVRIICRFNSASSRTREMITFSANRTTNELGLYKLDITSLEGVACAAEAKKDSLMASCQ 118
Query: 457 ASLVGRRSSSDISCNVPGYRTTTDQVVFKSKRSNLCIYGFNALNLRPFKRDLALCGK 627
ASL+GR S SCNVPG+RTTT+QVVFKSK SNLC+YGF ALN RP +++L LCGK
Sbjct: 119 ASLIGR---SKDSCNVPGFRTTTEQVVFKSKISNLCVYGFTALNFRPLEKNLHLCGK 172
>TAIR9_protein||AT3G27000.1 | Symbols: ARP2, ATARP2, WRM | ARP2 (ACTIN RELATED
PROTEIN 2); protein binding / structural constituent of cytoskeleton |
chr3:9952787-9955784 REVERSE
Length = 390
Score = 154 bits (388), Expect = 1e-037
Identities = 74/79 (93%), Positives = 75/79 (94%)
Frame = -2
Query: 1081 SSLEKEIQDRYLDTVLKGNKDGSKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWIN 902
S LEKEIQDRYLDTVLKGNKDG KKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWIN
Sbjct: 312 SRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWIN 371
Query: 901 REDYMKEGIGCLNKMSQA* 845
REDYM+EGI CLNKMSQA*
Sbjct: 372 REDYMEEGINCLNKMSQA* 390
Score = 97 bits (241), Expect = 2e-020
Identities = 46/47 (97%)
Frame = -2
Query: 1306 LIDVEGDGMADMVFRCIQEMDIDNRMTLYQHIVLSGGSTMYPGLPSR 1166
LIDVEGDGMADMVFRCIQEMDIDNRM LYQHIVLSGGSTMYPGLPSR
Sbjct: 267 LIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSR 313
>TAIR9_protein||AT5G13140.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pollen Ole e 1 allergen and extensin (InterPro:IPR006041);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G26960.1); Has 90 Blast hits to 85 proteins in 14 species:
Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 83; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr5:4170688-4171744
REVERSE
Length = 268
Score = 136 bits (340), Expect = 5e-032
Identities = 65/143 (45%), Positives = 94/143 (65%), Gaps = 3/143 (2%)
Frame = +1
Query: 205 PKAEVTVMGFVYCDVCSNNTFSTHSYFMSGVEVRIVCRFKSASSRTNEMVTFSANRTTNE 384
P + +TV+G VYCD CS NTFS SYF+ GVEV + CRFK++S +T E V S NRTTN
Sbjct: 35 PSSRITVVGVVYCDTCSINTFSRQSYFLQGVEVHVTCRFKASSPKTAEEVNISVNRTTNR 94
Query: 385 FGLYKVAITSLDWAD-VDSLA--SSCQASLVGRRSSSDISCNVPGYRTTTDQVVFKSKRS 555
G+YK+ I +D D VD +A S C A ++ S + C++P ++T T++V KSK+
Sbjct: 95 SGVYKLEIPHVDGIDCVDGIAISSQCSAKILKTSSDDNGGCSIPVFQTATNEVSIKSKQD 154
Query: 556 NLCIYGFNALNLRPFKRDLALCG 624
+CIY +AL+ +P ++ +LCG
Sbjct: 155 RVCIYSLSALSYKPPHKNTSLCG 177
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,265,933,573
Number of Sequences: 33410
Number of Extensions: 9265933573
Number of Successful Extensions: 317313259
Number of sequences better than 0.0: 0
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