Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN17618


BLASTX 7.6.2

Query= UN17618 /QuerySize=1308
        (1307 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G26960.1 | Symbols:  | unknown protein | chr3:...    279   4e-075
TAIR9_protein||AT5G41050.1 | Symbols:  | unknown protein | chr5:...    231   9e-061
TAIR9_protein||AT3G27000.1 | Symbols: ARP2, ATARP2, WRM | ARP2 (...    154   1e-037
TAIR9_protein||AT5G13140.1 | Symbols:  | FUNCTIONS IN: molecular...    136   5e-032

>TAIR9_protein||AT3G26960.1 | Symbols:  | unknown protein | chr3:9944859-9945459
        REVERSE

          Length = 175

 Score =  279 bits (712), Expect = 4e-075
 Identities = 138/174 (79%), Positives = 154/174 (88%), Gaps = 3/174 (1%)
 Frame = +1

Query: 118 EKKLIMFLFVLLQLLLVVNSLSPKHSPAKPK--AEVTVMGFVYCDVCSNNTFSTHSYFMS 291
           +K L MFLF+LLQ LL VNSLS KHS  KPK  AE+T+MGFVYCDVCS N+FS HSYFMS
Sbjct:   3 KKSLTMFLFILLQFLL-VNSLSSKHSSPKPKPDAEITIMGFVYCDVCSKNSFSKHSYFMS 61

Query: 292 GVEVRIVCRFKSASSRTNEMVTFSANRTTNEFGLYKVAITSLDWADVDSLASSCQASLVG 471
           GVEVRIVCRFK+ASS T E +TFSANRTTNEFGLYKVAI+SLD ADVDSLASSCQASL+G
Sbjct:  62 GVEVRIVCRFKAASSTTTETITFSANRTTNEFGLYKVAISSLDCADVDSLASSCQASLIG 121

Query: 472 RRSSSDISCNVPGYRTTTDQVVFKSKRSNLCIYGFNALNLRPFKRDLALCGKK* 633
           R++ SD SCN+PGYRTTTDQV+FKS++SN C+YGFNALN RPFKRDLALCGKK*
Sbjct: 122 RKNFSDSSCNIPGYRTTTDQVLFKSQQSNSCVYGFNALNFRPFKRDLALCGKK* 175

>TAIR9_protein||AT5G41050.1 | Symbols:  | unknown protein |
        chr5:16433478-16434076 REVERSE

          Length = 173

 Score =  231 bits (588), Expect = 9e-061
 Identities = 121/177 (68%), Positives = 140/177 (79%), Gaps = 11/177 (6%)
 Frame = +1

Query: 115 MEKKLIMFLFVLLQLLLVVNSLSPKHSPAKPKAEVTVMGFVYCDVCSNNTFSTHSYFMSG 294
           M++KLIM L  LL  LL +NSLS KHS AKP  ++TVMG VYCDVCSNN+FS HSYF+ G
Sbjct:   1 MKQKLIMLL--LLLQLLSLNSLSLKHSSAKPNGKITVMGLVYCDVCSNNSFSNHSYFIPG 58

Query: 295 VEVRIVCRFKSASSRTNEMVTFSANRTTNEFGLYKVAITSLDW------ADVDSLASSCQ 456
           VEVRI+CRF SASSRT EM+TFSANRTTNE GLYK+ ITSL+       A  DSL +SCQ
Sbjct:  59 VEVRIICRFNSASSRTREMITFSANRTTNELGLYKLDITSLEGVACAAEAKKDSLMASCQ 118

Query: 457 ASLVGRRSSSDISCNVPGYRTTTDQVVFKSKRSNLCIYGFNALNLRPFKRDLALCGK 627
           ASL+GR   S  SCNVPG+RTTT+QVVFKSK SNLC+YGF ALN RP +++L LCGK
Sbjct: 119 ASLIGR---SKDSCNVPGFRTTTEQVVFKSKISNLCVYGFTALNFRPLEKNLHLCGK 172

>TAIR9_protein||AT3G27000.1 | Symbols: ARP2, ATARP2, WRM | ARP2 (ACTIN RELATED
        PROTEIN 2); protein binding / structural constituent of cytoskeleton |
        chr3:9952787-9955784 REVERSE

          Length = 390

 Score =  154 bits (388), Expect = 1e-037
 Identities = 74/79 (93%), Positives = 75/79 (94%)
 Frame = -2

Query: 1081 SSLEKEIQDRYLDTVLKGNKDGSKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWIN 902
            S LEKEIQDRYLDTVLKGNKDG KKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWIN
Sbjct:  312 SRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWIN 371

Query:  901 REDYMKEGIGCLNKMSQA* 845
            REDYM+EGI CLNKMSQA*
Sbjct:  372 REDYMEEGINCLNKMSQA* 390


 Score =  97 bits (241), Expect = 2e-020
 Identities = 46/47 (97%)
 Frame = -2

Query: 1306 LIDVEGDGMADMVFRCIQEMDIDNRMTLYQHIVLSGGSTMYPGLPSR 1166
            LIDVEGDGMADMVFRCIQEMDIDNRM LYQHIVLSGGSTMYPGLPSR
Sbjct:  267 LIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSR 313

>TAIR9_protein||AT5G13140.1 | Symbols:  | FUNCTIONS IN: molecular_function
        unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22
        plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
        DOMAIN/s: Pollen Ole e 1 allergen and extensin (InterPro:IPR006041);
        BEST Arabidopsis thaliana protein match is: unknown protein
        (TAIR:AT3G26960.1); Has 90 Blast hits to 85 proteins in 14 species:
        Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 83; Viruses
        - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr5:4170688-4171744
        REVERSE

          Length = 268

 Score =  136 bits (340), Expect = 5e-032
 Identities = 65/143 (45%), Positives = 94/143 (65%), Gaps = 3/143 (2%)
 Frame = +1

Query: 205 PKAEVTVMGFVYCDVCSNNTFSTHSYFMSGVEVRIVCRFKSASSRTNEMVTFSANRTTNE 384
           P + +TV+G VYCD CS NTFS  SYF+ GVEV + CRFK++S +T E V  S NRTTN 
Sbjct:  35 PSSRITVVGVVYCDTCSINTFSRQSYFLQGVEVHVTCRFKASSPKTAEEVNISVNRTTNR 94

Query: 385 FGLYKVAITSLDWAD-VDSLA--SSCQASLVGRRSSSDISCNVPGYRTTTDQVVFKSKRS 555
            G+YK+ I  +D  D VD +A  S C A ++   S  +  C++P ++T T++V  KSK+ 
Sbjct:  95 SGVYKLEIPHVDGIDCVDGIAISSQCSAKILKTSSDDNGGCSIPVFQTATNEVSIKSKQD 154

Query: 556 NLCIYGFNALNLRPFKRDLALCG 624
            +CIY  +AL+ +P  ++ +LCG
Sbjct: 155 RVCIYSLSALSYKPPHKNTSLCG 177

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,265,933,573
Number of Sequences: 33410
Number of Extensions: 9265933573
Number of Successful Extensions: 317313259
Number of sequences better than 0.0: 0