BLASTX 7.6.2
Query= UN17786 /QuerySize=1315
(1314 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G11250.1 | Symbols: | 60S acidic ribosomal pr... 568 4e-162
TAIR9_protein||AT3G09200.1 | Symbols: | 60S acidic ribosomal pr... 565 3e-161
TAIR9_protein||AT2G40010.1 | Symbols: | 60S acidic ribosomal pr... 506 1e-143
TAIR9_protein||AT3G09200.2 | Symbols: | 60S acidic ribosomal pr... 451 7e-127
>TAIR9_protein||AT3G11250.1 | Symbols: | 60S acidic ribosomal protein P0
(RPP0C) | chr3:3521453-3522826 FORWARD
Length = 324
Score = 568 bits (1462), Expect = 4e-162
Identities = 300/327 (91%), Positives = 313/327 (95%), Gaps = 6/327 (1%)
Frame = -1
Query: 1245 MVKATKAEKKIAYDAKLCQLIDEFTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 1066
MVKATKAEKKIAYD KLCQLIDE+TQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 1065 MKRSVKIHAENTGNTGILNLMPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 886
MKRSV+IH+EN+GNT ILNL+PLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP
Sbjct: 61 MKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120
Query: 885 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 706
IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180
Query: 705 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDDLVQKFAAGISMVTSLALAISYPTLAAAP 526
GIRPFSYGLVVQSVYDNGSVFSPEVLDLTED LV+KFA+GISMVTSLALA+SYPTLAAAP
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAP 240
Query: 525 HMFINAYKNALAISVATEYTFPQAEKVKEYLKDPSKFAVAAAAVSADAGGG-ASAG-AAK 352
HMFINAYKNALAI+VAT+YTFPQAEKVKE+LKDPSKF VAAAAVSADAGGG A AG AAK
Sbjct: 241 HMFINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKFVVAAAAVSADAGGGSAQAGAAAK 300
Query: 351 VEEKKEVVEESDEEDY-GGFDMFGDE* 274
VEEKK EESDEEDY GGF +F +E*
Sbjct: 301 VEEKK---EESDEEDYEGGFGLFDEE* 324
>TAIR9_protein||AT3G09200.1 | Symbols: | 60S acidic ribosomal protein P0
(RPP0B) | chr3:2823364-2825020 REVERSE
Length = 321
Score = 565 bits (1454), Expect = 3e-161
Identities = 300/322 (93%), Positives = 310/322 (96%), Gaps = 7/322 (2%)
Frame = -1
Query: 1245 MVKATKAEKKIAYDAKLCQLIDEFTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 1066
MVKATKAEKKIAYD KLCQLIDE+TQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 1065 MKRSVKIHAENTGNTGILNLMPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 886
MKRSV+IH+ENTGNT ILNL+PLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP
Sbjct: 61 MKRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120
Query: 885 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 706
IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180
Query: 705 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDDLVQKFAAGISMVTSLALAISYPTLAAAP 526
GIRPFSYGLVVQSVYDNGSVFSPEVLDLTED LV+KFA+GISMVTSLALA+SYPTLAAAP
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAP 240
Query: 525 HMFINAYKNALAISVATEYTFPQAEKVKEYLKDPSKFAVAA-AAVSADAGGGASAGAAKV 349
HMFINAYKNALAI+VATEYTFPQAEKVKEYLKDPSKFAVA+ AAVSADAGGGA A AAKV
Sbjct: 241 HMFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGAPA-AAKV 299
Query: 348 EEKKEVVEESDEEDYGG-FDMF 286
EEK EESDEEDYGG F +F
Sbjct: 300 EEK----EESDEEDYGGDFGLF 317
>TAIR9_protein||AT2G40010.1 | Symbols: | 60S acidic ribosomal protein P0
(RPP0A) | chr2:16708578-16710448 REVERSE
Length = 318
Score = 506 bits (1302), Expect = 1e-143
Identities = 262/310 (84%), Positives = 290/310 (93%), Gaps = 5/310 (1%)
Frame = -1
Query: 1242 VKATKAEKKIAYDAKLCQLIDEFTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 1063
VKATKAEKKI YD+KLCQL++E++QILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM
Sbjct: 3 VKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMM 62
Query: 1062 KRSVKIHAENTGNTGILNLMPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 883
KRSV+IHA+ TGN L+L+PLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI
Sbjct: 63 KRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPI 122
Query: 882 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLG 703
DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+GDKVGSSEAALLAKLG
Sbjct: 123 DVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLG 182
Query: 702 IRPFSYGLVVQSVYDNGSVFSPEVLDLTEDDLVQKFAAGISMVTSLALAISYPTLAAAPH 523
IRPFSYGLVV+SVYDNGSVF+PEVL+LTEDDLV+KFAAG+SM+T+L+LAISYPT+AAAPH
Sbjct: 183 IRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAAPH 242
Query: 522 MFINAYKNALAISVATEYTFPQAEKVKEYLKDPSKFAVAAAA-VSADAGGGASAGAAKVE 346
MF+NAYKN LA+++ATEY+FPQAE VKE+LKDP+KFAVA AA VS ++GG A A VE
Sbjct: 243 MFLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKFAVAVAAPVSGESGGAVVAVA--VE 300
Query: 345 EKKEVVEESD 316
E E EESD
Sbjct: 301 E--EAAEESD 308
>TAIR9_protein||AT3G09200.2 | Symbols: | 60S acidic ribosomal protein P0
(RPP0B) | chr3:2823364-2825020 REVERSE
Length = 288
Score = 451 bits (1158), Expect = 7e-127
Identities = 240/263 (91%), Positives = 251/263 (95%), Gaps = 7/263 (2%)
Frame = -1
Query: 1068 MMKRSVKIHAENTGNTGILNLMPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 889
++ RSV+IH+ENTGNT ILNL+PLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA
Sbjct: 27 ILVRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 86
Query: 888 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAK 709
PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAK
Sbjct: 87 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAK 146
Query: 708 LGIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDDLVQKFAAGISMVTSLALAISYPTLAAA 529
LGIRPFSYGLVVQSVYDNGSVFSPEVLDLTED LV+KFA+GISMVTSLALA+SYPTLAAA
Sbjct: 147 LGIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAA 206
Query: 528 PHMFINAYKNALAISVATEYTFPQAEKVKEYLKDPSKFAVAA-AAVSADAGGGASAGAAK 352
PHMFINAYKNALAI+VATEYTFPQAEKVKEYLKDPSKFAVA+ AAVSADAGGGA A AAK
Sbjct: 207 PHMFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGAPA-AAK 265
Query: 351 VEEKKEVVEESDEEDYGG-FDMF 286
VEEK EESDEEDYGG F +F
Sbjct: 266 VEEK----EESDEEDYGGDFGLF 284
Score = 66 bits (160), Expect = 4e-011
Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Frame = -1
Query: 1245 MVKATKAEKKIAYDAKLCQLIDEFTQILV----VAADNVGSTQLQNIRKGLRGDSVVLMG 1078
MVKATKAEKKIAYD KLCQLIDE+TQILV + ++N G+T + N+ L+G+ ++
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVRSVRIHSENTGNTAILNLLPLLQGNVGLIFT 60
Query: 1077 KNTMMKRSVKIHAENTG 1027
K + + S ++ G
Sbjct: 61 KGDLKEVSEEVAKYKVG 77
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,309,451,810
Number of Sequences: 33410
Number of Extensions: 9309451810
Number of Successful Extensions: 317330932
Number of sequences better than 0.0: 0
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