Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN17834


BLASTX 7.6.2

Query= UN17834 /QuerySize=674
        (673 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G24490.1 | Symbols:  | 30S ribosomal protein, ...    225   3e-059

>TAIR9_protein||AT5G24490.1 | Symbols:  | 30S ribosomal protein, putative |
        chr5:8365690-8367178 FORWARD

          Length = 309

 Score =  225 bits (572), Expect = 3e-059
 Identities = 113/127 (88%), Positives = 116/127 (91%), Gaps = 5/127 (3%)
 Frame = +3

Query: 150 SDHGRHMKGFNRSKVREPVIEPVVEDPED-----VAGEEEEDDLIKEIVRTKYFEMPPLT 314
           SDHGRHMKGFNR KVREPVIEPVVED ED     V  EEEEDDLIKEIVRTK FEMPPLT
Sbjct: 183 SDHGRHMKGFNRLKVREPVIEPVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLT 242

Query: 315 VSEAVEQLELVAHDFYGFQNEETGEINIVYKRKEGGYGLIIPKKDGKAEKVDPLPTEQLN 494
           V+EAVEQLELV+HDFYGFQNEETGEINIVYKRKEGGYGLIIPKKDGKAEKV+PLPTEQLN
Sbjct: 243 VAEAVEQLELVSHDFYGFQNEETGEINIVYKRKEGGYGLIIPKKDGKAEKVEPLPTEQLN 302

Query: 495 EHSFAE* 515
           EHSFAE*
Sbjct: 303 EHSFAE* 309


 Score =  52 bits (124), Expect = 2e-007
 Identities = 25/35 (71%), Positives = 27/35 (77%)
 Frame = +3

Query:  39 MTTLLGFSHTKLPHCNVSITSPTCPSSSTVVSMVG 143
           M TLLGFS TK  HC V I++P C SSSTVVSMVG
Sbjct:   1 MATLLGFSQTKFHHCGVWISTPPCSSSSTVVSMVG 35

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,353,020,117
Number of Sequences: 33410
Number of Extensions: 9353020117
Number of Successful Extensions: 317343228
Number of sequences better than 0.0: 0