BLASTX 7.6.2
Query= UN17863 /QuerySize=988
(987 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G07090.1 | Symbols: | 40S ribosomal protein S... 521 4e-148
TAIR9_protein||AT5G58420.1 | Symbols: | 40S ribosomal protein S... 518 2e-147
TAIR9_protein||AT2G17360.1 | Symbols: | 40S ribosomal protein S... 518 3e-147
TAIR9_protein||AT5G07090.2 | Symbols: | 40S ribosomal protein S... 482 2e-136
>TAIR9_protein||AT5G07090.1 | Symbols: | 40S ribosomal protein S4 (RPS4B) |
chr5:2202410-2203805 FORWARD
Length = 263
Score = 521 bits (1340), Expect = 4e-148
Identities = 254/263 (96%), Positives = 260/263 (98%)
Frame = -2
Query: 926 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 747
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60
Query: 746 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 567
VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 566 FKLCKVRTIQLGRKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 387
FKLCKVR+IQ G+KGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180
Query: 386 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTLGKGTKPWVSLPK 207
VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNV+T+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240
Query: 206 GKGIKLTIIEEAKKRLAGQQAA* 138
GKGIKLTIIEEA+KRLA QQAA*
Sbjct: 241 GKGIKLTIIEEARKRLASQQAA* 263
>TAIR9_protein||AT5G58420.1 | Symbols: | 40S ribosomal protein S4 (RPS4D) |
chr5:23619599-23620896 FORWARD
Length = 263
Score = 518 bits (1334), Expect = 2e-147
Identities = 253/263 (96%), Positives = 259/263 (98%)
Frame = -2
Query: 926 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 747
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60
Query: 746 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 567
VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 566 FKLCKVRTIQLGRKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 387
FKLCKVR+IQ G+KGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLE NKIVEFIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNV 180
Query: 386 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTLGKGTKPWVSLPK 207
VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNV+T+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240
Query: 206 GKGIKLTIIEEAKKRLAGQQAA* 138
GKGIKLTIIEEA+KRLA QQAA*
Sbjct: 241 GKGIKLTIIEEARKRLASQQAA* 263
>TAIR9_protein||AT2G17360.1 | Symbols: | 40S ribosomal protein S4 (RPS4A) |
chr2:7546598-7548138 FORWARD
Length = 262
Score = 518 bits (1332), Expect = 3e-147
Identities = 252/261 (96%), Positives = 259/261 (99%)
Frame = -2
Query: 926 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 747
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60
Query: 746 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 567
VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAK
Sbjct: 61 VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120
Query: 566 FKLCKVRTIQLGRKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 387
FKLCKVR+IQ G+KGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180
Query: 386 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVFTLGKGTKPWVSLPK 207
VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNV+T+GKGTKPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPK 240
Query: 206 GKGIKLTIIEEAKKRLAGQQA 144
GKGIKLTIIEEA+KRL+ QQA
Sbjct: 241 GKGIKLTIIEEARKRLSAQQA 261
>TAIR9_protein||AT5G07090.2 | Symbols: | 40S ribosomal protein S4 (RPS4B) |
chr5:2202783-2203805 FORWARD
Length = 245
Score = 482 bits (1239), Expect = 2e-136
Identities = 236/245 (96%), Positives = 242/245 (98%)
Frame = -2
Query: 872 MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 693
MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT
Sbjct: 1 MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 60
Query: 692 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRTIQLGRKGIPY 513
DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSI+DEEAKFKLCKVR+IQ G+KGIPY
Sbjct: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPY 120
Query: 512 LNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR 333
LNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR
Sbjct: 121 LNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR 180
Query: 332 EKHKGSFETIHIQDSTGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLTIIEEAKKRLAG 153
EKHKGSFETIHIQDSTGHEFATRLGNV+T+GKGTKPWVSLPKGKGIKLTIIEEA+KRLA
Sbjct: 181 EKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLAS 240
Query: 152 QQAA* 138
QQAA*
Sbjct: 241 QQAA* 245
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,353,020,117
Number of Sequences: 33410
Number of Extensions: 9353020117
Number of Successful Extensions: 317343228
Number of sequences better than 0.0: 0
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