BLASTX 7.6.2
Query= UN17906 /QuerySize=802
(801 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G24830.1 | Symbols: | 60S ribosomal protein L... 389 2e-108
TAIR9_protein||AT4G13170.1 | Symbols: | 60S ribosomal protein L... 384 3e-107
TAIR9_protein||AT3G07110.1 | Symbols: | 60S ribosomal protein L... 384 4e-107
TAIR9_protein||AT5G48760.1 | Symbols: | 60S ribosomal protein L... 382 2e-106
TAIR9_protein||AT5G48760.2 | Symbols: | 60S ribosomal protein L... 382 2e-106
TAIR9_protein||AT3G07110.2 | Symbols: | 60S ribosomal protein L... 379 1e-105
>TAIR9_protein||AT3G24830.1 | Symbols: | 60S ribosomal protein L13A (RPL13aB) |
chr3:9064613-9065871 FORWARD
Length = 207
Score = 389 bits (997), Expect = 2e-108
Identities = 192/202 (95%), Positives = 196/202 (97%)
Frame = +2
Query: 68 GICAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICLSGGLVRQKMKYMRFLRK 247
GIC+KRVVVDARHHM GRLASI+AKELLNGQ VVVVRCEEICLSGGLVRQKMKYMRFLRK
Sbjct: 6 GICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYMRFLRK 65
Query: 248 RMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKVKRMVI 427
RMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKVKRMVI
Sbjct: 66 RMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKVKRMVI 125
Query: 428 PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEVKRKERSQAVYERKKQLIKLRTK 607
PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEVKRKERSQA+YERKKQL KLR K
Sbjct: 126 PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEVKRKERSQALYERKKQLTKLRAK 185
Query: 608 AEKVAEEKLGTQLDVLAPIKY* 673
AEKVAEEKLG+QLDVLA IKY*
Sbjct: 186 AEKVAEEKLGSQLDVLASIKY* 207
>TAIR9_protein||AT4G13170.1 | Symbols: | 60S ribosomal protein L13A (RPL13aC) |
chr4:7655133-7656542 REVERSE
Length = 207
Score = 384 bits (986), Expect = 3e-107
Identities = 187/202 (92%), Positives = 194/202 (96%)
Frame = +2
Query: 68 GICAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICLSGGLVRQKMKYMRFLRK 247
GICAKRVVVD RHHMLGRLAS AKELLNGQ VVVVRCEEICLSGGLVRQKMKYMRFLRK
Sbjct: 6 GICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYMRFLRK 65
Query: 248 RMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKVKRMVI 427
RMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEG+PPPYDK+KRMVI
Sbjct: 66 RMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKIKRMVI 125
Query: 428 PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEVKRKERSQAVYERKKQLIKLRTK 607
PDALKVLRLQ+GHKYCLLGRLSSEVGWNHYDTIKELE KRKERSQ +YERKKQL KLRTK
Sbjct: 126 PDALKVLRLQSGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVMYERKKQLNKLRTK 185
Query: 608 AEKVAEEKLGTQLDVLAPIKY* 673
AEKVAEE+LG+QLDVLAP+KY*
Sbjct: 186 AEKVAEERLGSQLDVLAPVKY* 207
>TAIR9_protein||AT3G07110.1 | Symbols: | 60S ribosomal protein L13A (RPL13aA) |
chr3:2252092-2253332 FORWARD
Length = 207
Score = 384 bits (985), Expect = 4e-107
Identities = 187/202 (92%), Positives = 195/202 (96%)
Frame = +2
Query: 68 GICAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICLSGGLVRQKMKYMRFLRK 247
GICAKRVVVDARHHMLGRLAS+VAK+LLNGQ +VVVRCEEICLSGGLVRQKMKYMRFLRK
Sbjct: 6 GICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYMRFLRK 65
Query: 248 RMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKVKRMVI 427
RMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGA ALARLKVFEGVP PYDK+KRMV+
Sbjct: 66 RMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKIKRMVV 125
Query: 428 PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEVKRKERSQAVYERKKQLIKLRTK 607
PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+QAVYERKKQL KLR K
Sbjct: 126 PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELENKRKERAQAVYERKKQLSKLRAK 185
Query: 608 AEKVAEEKLGTQLDVLAPIKY* 673
AEKVAEEKLG+QLDVLAP+KY*
Sbjct: 186 AEKVAEEKLGSQLDVLAPVKY* 207
>TAIR9_protein||AT5G48760.1 | Symbols: | 60S ribosomal protein L13A (RPL13aD) |
chr5:19771315-19772686 REVERSE
Length = 207
Score = 382 bits (979), Expect = 2e-106
Identities = 185/202 (91%), Positives = 193/202 (95%)
Frame = +2
Query: 68 GICAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICLSGGLVRQKMKYMRFLRK 247
GIC+KRVVVDARHHMLGRLASI AKELLNGQ+VV+VRCEEICLSGGLVRQKMKYMRFLRK
Sbjct: 6 GICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYMRFLRK 65
Query: 248 RMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKVKRMVI 427
RMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKV+EGVP PYDK+KRMVI
Sbjct: 66 RMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKIKRMVI 125
Query: 428 PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEVKRKERSQAVYERKKQLIKLRTK 607
PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+ VYERKKQL KLR K
Sbjct: 126 PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERAHVVYERKKQLNKLRVK 185
Query: 608 AEKVAEEKLGTQLDVLAPIKY* 673
AEKVAEEKLG QLD+LAP+KY*
Sbjct: 186 AEKVAEEKLGAQLDILAPVKY* 207
>TAIR9_protein||AT5G48760.2 | Symbols: | 60S ribosomal protein L13A (RPL13aD) |
chr5:19771315-19772686 REVERSE
Length = 207
Score = 382 bits (979), Expect = 2e-106
Identities = 185/202 (91%), Positives = 193/202 (95%)
Frame = +2
Query: 68 GICAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICLSGGLVRQKMKYMRFLRK 247
GIC+KRVVVDARHHMLGRLASI AKELLNGQ+VV+VRCEEICLSGGLVRQKMKYMRFLRK
Sbjct: 6 GICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYMRFLRK 65
Query: 248 RMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKVKRMVI 427
RMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKV+EGVP PYDK+KRMVI
Sbjct: 66 RMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKIKRMVI 125
Query: 428 PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEVKRKERSQAVYERKKQLIKLRTK 607
PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+ VYERKKQL KLR K
Sbjct: 126 PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERAHVVYERKKQLNKLRVK 185
Query: 608 AEKVAEEKLGTQLDVLAPIKY* 673
AEKVAEEKLG QLD+LAP+KY*
Sbjct: 186 AEKVAEEKLGAQLDILAPVKY* 207
>TAIR9_protein||AT3G07110.2 | Symbols: | 60S ribosomal protein L13A (RPL13aA) |
chr3:2252092-2253332 FORWARD
Length = 208
Score = 379 bits (973), Expect = 1e-105
Identities = 187/203 (92%), Positives = 195/203 (96%), Gaps = 1/203 (0%)
Frame = +2
Query: 68 GICAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICLSGGLVRQKMKYMRFLRK 247
GICAKRVVVDARHHMLGRLAS+VAK+LLNGQ +VVVRCEEICLSGGLVRQKMKYMRFLRK
Sbjct: 6 GICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYMRFLRK 65
Query: 248 RMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKVKRMVI 427
RMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGA ALARLKVFEGVP PYDK+KRMV+
Sbjct: 66 RMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKIKRMVV 125
Query: 428 PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK-ELEVKRKERSQAVYERKKQLIKLRT 604
PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK ELE KRKER+QAVYERKKQL KLR
Sbjct: 126 PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKQELENKRKERAQAVYERKKQLSKLRA 185
Query: 605 KAEKVAEEKLGTQLDVLAPIKY* 673
KAEKVAEEKLG+QLDVLAP+KY*
Sbjct: 186 KAEKVAEEKLGSQLDVLAPVKY* 208
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,353,020,117
Number of Sequences: 33410
Number of Extensions: 9353020117
Number of Successful Extensions: 317343228
Number of sequences better than 0.0: 0
|
