BLASTX 7.6.2
Query= UN18078 /QuerySize=1660
(1659 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G02150.1 | Symbols: | pentatricopeptide (PPR)... 629 3e-180
TAIR9_protein||AT1G02370.1 | Symbols: | pentatricopeptide (PPR)... 200 2e-051
TAIR9_protein||AT4G01990.1 | Symbols: | pentatricopeptide (PPR)... 197 2e-050
TAIR9_protein||AT1G60770.1 | Symbols: | pentatricopeptide (PPR)... 192 8e-049
TAIR9_protein||AT4G02820.1 | Symbols: | pentatricopeptide (PPR)... 184 2e-046
TAIR9_protein||AT2G20710.1 | Symbols: | pentatricopeptide (PPR)... 182 8e-046
TAIR9_protein||AT5G27460.1 | Symbols: | pentatricopeptide (PPR)... 169 4e-042
TAIR9_protein||AT4G21705.1 | Symbols: | pentatricopeptide (PPR)... 168 2e-041
TAIR9_protein||AT1G28020.1 | Symbols: | pentatricopeptide (PPR)... 162 9e-040
TAIR9_protein||AT5G09450.1 | Symbols: | pentatricopeptide (PPR)... 160 3e-039
TAIR9_protein||AT2G20710.2 | Symbols: | pentatricopeptide (PPR)... 151 2e-036
TAIR9_protein||AT1G15480.1 | Symbols: | DNA binding | chr1:5318... 111 1e-024
TAIR9_protein||AT3G11380.1 | Symbols: | pentatricopeptide (PPR)... 101 1e-021
TAIR9_protein||AT3G15590.1 | Symbols: | DNA-binding protein, pu... 90 3e-018
TAIR9_protein||AT1G43010.1 | Symbols: | pentatricopeptide (PPR)... 85 1e-016
TAIR9_protein||AT1G13040.1 | Symbols: | pentatricopeptide (PPR)... 50 4e-006
>TAIR9_protein||AT1G02150.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:408779-410433 FORWARD
Length = 525
Score = 629 bits (1620), Expect = 3e-180
Identities = 331/395 (83%), Positives = 350/395 (88%), Gaps = 11/395 (2%)
Frame = +3
Query: 27 MLLQ-AVQNRNVPLASSSASYARLPRPKLPPVVVSVAPMKKTAAIIVCSISQVYGYGTVD 203
MLLQ AVQNRNVPLA SSASY+RL R + P VVSVA + K A IVCSISQVYGYGTVD
Sbjct: 1 MLLQAAVQNRNVPLA-SSASYSRLLRCRSP--VVSVAALSKKTAAIVCSISQVYGYGTVD 57
Query: 204 YERRPIIQWNAIYKKISLMEKPELGAASVLNQWEKGGRKLTKWELCRVVKELRKYKRPNQ 383
YERRPI+QWNAIYKKISLMEKPELGAASVLNQWEK GRKLTKWELCRVVKELRKYKR NQ
Sbjct: 58 YERRPIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQ 117
Query: 384 ALEVYDWMNQRGERFRLSASDAAIQLDLIGKVRGISDAEDFFLTLPDNFKDRRVYGSLLN 563
ALEVYDWMN RGERFRLSASDAAIQLDLIGKVRGI DAE+FFL LP+NFKDRRVYGSLLN
Sbjct: 118 ALEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLN 177
Query: 564 AYVRAKSRDKAEALIDTMRQKGYALHPLPFNVMMALYMNLREYDKVDAMVFEMKQKDIRL 743
AYVRAKSR+KAEAL++TMR KGYALHPLPFNVMM LYMNLREYDKVDAMVFEMKQKDIRL
Sbjct: 178 AYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRL 237
Query: 744 DIHSYNIWLSSC---SSVDQMELVYHQMKSDVSINPNWTTFS---TMYIKMGESQKAEDA 905
DI+SYNIWLSSC SV++MELVY QMKSDVSI PNWTTFS TMYIKMGE++KAEDA
Sbjct: 238 DIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDA 297
Query: 906 LRKVEARITGRNRIPYHYLLSLYGSLGNVKELFRVWNVYKSVVPSIPNLGYHALVSSLVR 1085
LRKVEARITGRNRIPYHYLLSLYGSLGN KEL+RVW+VYKSVVPSIPNLGYHALVSSLVR
Sbjct: 298 LRKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVR 357
Query: 1086 MGDIEGAEKYMRSGF-LSSLL*PQDTNLLMMCTLK 1187
MGDIEGAEK + S P+ NLLM +K
Sbjct: 358 MGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVK 392
Score = 172 bits (434), Expect = 9e-043
Identities = 92/132 (69%), Positives = 101/132 (76%), Gaps = 5/132 (3%)
Frame = +1
Query: 1144 FDPRILTFL-*CVR*NDQLDKAEGLFDHMIEMGGKPSPGTWEILADGHTRKRSITQALAC 1320
+DPRI L NDQL+ AEGLFDHM+EMGGKPS TWEILA GHTRKR I++AL C
Sbjct: 378 YDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEALTC 437
Query: 1321 LKQAFFAQGSSNLRPKVLVLSGFFKLCEEESDVASKETVLELLRQSGHLQDKSYQALIDA 1500
L+ AF A+GSSN RPKVL+LSGFFKLCEEESDV SKE VLELLRQSG L+DKSY ALID
Sbjct: 438 LRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLEDKSYLALIDV 497
Query: 1501 AE----ENDETD 1524
E N E D
Sbjct: 498 DENRTVNNSEID 509
>TAIR9_protein||AT1G02370.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:474516-476383 FORWARD
Length = 538
Score = 200 bits (508), Expect = 2e-051
Identities = 108/299 (36%), Positives = 172/299 (57%), Gaps = 9/299 (3%)
Frame = +3
Query: 237 IYKKISLMEKPELGAASVLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEVYDWMNQR 416
+YKK+S++ A LNQ+ G + K +L R K LRK++RP A E++DWM +R
Sbjct: 73 LYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDWMEKR 132
Query: 417 GERFRLSASDAAIQLDLIGKVRGISDAEDFFLTLPDNFKDRR-VYGSLLNAYVRAKSRDK 593
+ S SD AI LDLIGK +G+ AE++F L + K+ + YG+L+N Y +K
Sbjct: 133 --KMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEK 190
Query: 594 AEALIDTMRQKGYALHPLPFNVMMALYMNLREYDKVDAMVFEMKQKDIRLDIHSYNIWLS 773
A+A + M + + + LPFN MM++YM L + +KV +V MKQ+ I +Y+IW+
Sbjct: 191 AKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQ 250
Query: 774 SCSS---VDQMELVYHQMKSDVSINPNWTTFSTM---YIKMGESQKAEDALRKVEARITG 935
SC S +D +E + +M D W TFS + Y K G +KA+ AL+ +E ++
Sbjct: 251 SCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEKMNP 310
Query: 936 RNRIPYHYLLSLYGSLGNVKELFRVWNVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEK 1112
NR +H+L+SLY + E++RVW K P + NL Y ++ ++ ++GD++G +K
Sbjct: 311 NNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKK 369
>TAIR9_protein||AT4G01990.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:871268-872885 REVERSE
Length = 503
Score = 197 bits (500), Expect = 2e-050
Identities = 111/300 (37%), Positives = 181/300 (60%), Gaps = 9/300 (3%)
Frame = +3
Query: 234 AIYKKISLMEKPELG-AASVLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEVYDWMN 410
+IYKK+S + G LNQ+ G + K +L R K+LRK+++P +ALE+++WM
Sbjct: 40 SIYKKLSSLGTRGGGKMEETLNQFVMEGVPVKKHDLIRYAKDLRKFRQPQRALEIFEWME 99
Query: 411 QRGERFRLSASDAAIQLDLIGKVRGISDAEDFFLTLPDNFKDRRVYGSLLNAYVRAKSRD 590
++ F + SD AI+L+LI K +G+ AE +F +L D+ K++ YGSLLN Y K
Sbjct: 100 RKEIAF--TGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEV 157
Query: 591 KAEALIDTMRQKGYALHPLPFNVMMALYMNLREYDKVDAMVFEMKQKDIRLDIHSYNIWL 770
KA+A + M + + LPFN +MA+YM L + +KV A+V MK+K I +Y++W+
Sbjct: 158 KAKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWI 217
Query: 771 SSCSS---VDQMELVYHQMKSDVSINPNWTTFSTM---YIKMGESQKAEDALRKVEARIT 932
SC S +D +E V +MK++ +W TF+ + YIK+G KAE+AL+ +E +
Sbjct: 218 QSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEALKSLENNMN 277
Query: 933 GRNRIPYHYLLSLYGSLGNVKELFRVWNVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEK 1112
R YH+L++LY + N E++RVW++ K P++ N Y ++ +L ++ DI+G +K
Sbjct: 278 PDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKK 337
>TAIR9_protein||AT1G60770.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:22366959-22368648 REVERSE
Length = 492
Score = 192 bits (486), Expect = 8e-049
Identities = 102/297 (34%), Positives = 171/297 (57%), Gaps = 8/297 (2%)
Frame = +3
Query: 237 IYKKISLMEKPELGAASVLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEVYDWMNQR 416
+Y ++ E+ LNQ+ KG + + KWE+ +K+LR AL++ + M +R
Sbjct: 25 LYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVMEER 84
Query: 417 GERFRLSASDAAIQLDLIGKVRGISDAEDFFLTLPDNFKDRRVYGSLLNAYVRAKSRDKA 596
G + SD AI LDL+ K R I+ E++F+ LP+ K YGSLLN Y + +KA
Sbjct: 85 G--MNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKA 142
Query: 597 EALIDTMRQKGYALHPLPFNVMMALYMNLREYDKVDAMVFEMKQKDIRLDIHSYNIW--- 767
E L++ M++ + +N +M LY E +KV AM+ E+K +++ D ++YN+W
Sbjct: 143 EGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRA 202
Query: 768 LSSCSSVDQMELVYHQMKSDVSINPNWTTFSTM---YIKMGESQKAEDALRKVEARITGR 938
L++ + + +E V +M D + P+WTT+S M Y+ G SQKAE AL+++E + T R
Sbjct: 203 LAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQR 262
Query: 939 NRIPYHYLLSLYGSLGNVKELFRVWNVYKSVVPSIPNLGYHALVSSLVRMGDIEGAE 1109
+ Y +L++LYG LG + E++R+W + +P N+ Y ++ LV++ D+ GAE
Sbjct: 263 DFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAE 319
>TAIR9_protein||AT4G02820.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:1258581-1260265 FORWARD
Length = 533
Score = 184 bits (465), Expect = 2e-046
Identities = 101/283 (35%), Positives = 174/283 (61%), Gaps = 9/283 (3%)
Frame = +3
Query: 279 AASVLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEVYDWMNQRGERFRLSASDAAIQ 458
A + +W++ G + K+EL R+V+ELRK KR ALE+ +WM + E +L A D A+
Sbjct: 77 AVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQ-EDIKLQAGDYAVH 135
Query: 459 LDLIGKVRGISDAEDFFLTLPDNFKDRRVYGSLLNAYVRAKSRDKAEALIDTMRQKGYAL 638
LDLI K+RG++ AE FF +PD + SLL++YV+ K DKAEAL + M + G+
Sbjct: 136 LDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLK 195
Query: 639 HPLPFNVMMALYMNLREYDKVDAMVFEMKQKDIRLDIHSYNIWLSSCSS---VDQMELVY 809
LP+N M+++Y++ +++KV ++ E+K + DI +YN+WL++ +S V+ E VY
Sbjct: 196 SCLPYNHMLSMYISRGQFEKVPVLIKELKIR-TSPDIVTYNLWLTAFASGNDVEGAEKVY 254
Query: 810 HQMKSDVSINPNWTTFS---TMYIKMGESQKAEDALRKVEARITGRNRIPYHYLLSLYGS 980
+ K + +NP+W T+S +Y K +KA AL+++E ++ +NR+ Y L+SL+ +
Sbjct: 255 LKAKEE-KLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHAN 313
Query: 981 LGNVKELFRVWNVYKSVVPSIPNLGYHALVSSLVRMGDIEGAE 1109
LG+ + W KS + + Y +++S++V++G+ E A+
Sbjct: 314 LGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAK 356
>TAIR9_protein||AT2G20710.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr2:8926110-8927722 FORWARD
Length = 491
Score = 182 bits (460), Expect = 8e-046
Identities = 104/308 (33%), Positives = 176/308 (57%), Gaps = 9/308 (2%)
Frame = +3
Query: 216 PIIQWNAIYKKISLMEKPELGAASVLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEV 395
P+ ++ + ++++ P VL+ W G + EL ++K LRK+ R + AL++
Sbjct: 33 PLDPYDTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQI 92
Query: 396 YDWMNQRGERFRLSASDAAIQLDLIGKVRGISDAEDFFLTLPDNFKDRRVYGSLLNAYVR 575
DWM++ +S D AI+LDLI KV G+ +AE FF T+P ++ +YG+LLN Y
Sbjct: 93 SDWMSEH-RVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYAS 151
Query: 576 AKSRDKAEALIDTMRQKGYALHPLPFNVMMALYMNLREYDKVDAMVFEMKQKDIRLDIHS 755
K KAE + M++ G+ LP+NVM+ LY+ +Y V+ ++ EM+ + ++ DI +
Sbjct: 152 KKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFT 211
Query: 756 YNIWL---SSCSSVDQMELVYHQMKSDVSINPNWTTFSTM---YIKMGESQKAEDALRKV 917
N L S S V+ ME + ++D ++ +W T++ YIK G ++KA + LRK
Sbjct: 212 VNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKS 271
Query: 918 EARITGRNR-IPYHYLLSLYGSLGNVKELFRVWNVYKSVVPSIPNLGYHALVSSLVRMGD 1094
E + + R Y L+S YG+ G +E++R+W++YK + N GY +++S+L++M D
Sbjct: 272 EQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKE-LDGFYNTGYISVISALLKMDD 330
Query: 1095 IEGAEKYM 1118
IE EK M
Sbjct: 331 IEEVEKIM 338
>TAIR9_protein||AT5G27460.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:9693262-9694815 REVERSE
Length = 492
Score = 169 bits (428), Expect = 4e-042
Identities = 109/301 (36%), Positives = 164/301 (54%), Gaps = 13/301 (4%)
Frame = +3
Query: 243 KKISLMEKPELGAASVLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEVYDWM-NQRG 419
K+I P S+L + G ++ EL + K L + R + AL++ +WM NQ+
Sbjct: 42 KEILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKD 101
Query: 420 ERFRLSASDAAIQLDLIGKVRGISDAEDFFLTLPDNFKDRRV----YGSLLNAYVRAKSR 587
F S D A++LDLI K G+ E++F L + RV Y LL AYV+ K
Sbjct: 102 IEF--SVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMV 159
Query: 588 DKAEALIDTMRQKGYALHPLPFNVMMALYMNLREYDKVDAMVFEMKQKDIRLDIHSYNIW 767
+AEAL++ + G+ + P PFN MM LY +Y+KV +V MK I ++ SYN+W
Sbjct: 160 KEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLW 219
Query: 768 LSSC---SSVDQMELVYHQMKSDVSINPNWT---TFSTMYIKMGESQKAEDALRKVEARI 929
+++C S V +E VY +M D S+ W+ T + +YIK G +KA L E +
Sbjct: 220 MNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKML 279
Query: 930 TGRNRIPYHYLLSLYGSLGNVKELFRVWNVYKSVVPSIPNLGYHALVSSLVRMGDIEGAE 1109
NR+ Y +L++LY SLGN + + R+W V KSV I + Y ++SSLV+ GD+E AE
Sbjct: 280 NRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAE 339
Query: 1110 K 1112
+
Sbjct: 340 R 340
>TAIR9_protein||AT4G21705.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:11533257-11534817 REVERSE
Length = 493
Score = 168 bits (423), Expect = 2e-041
Identities = 95/305 (31%), Positives = 173/305 (56%), Gaps = 7/305 (2%)
Frame = +3
Query: 222 IQWNAIYKKISLMEKPELGAASVLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEVYD 401
++ +Y KIS + P+ L W + G+K++ EL R+V +LR+ KR ALEV
Sbjct: 22 VKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSK 81
Query: 402 WMNQRGERFRLSASDAAIQLDLIGKVRGISDAEDFFLTLPDNFKDRRVYGSLLNAYVRAK 581
WMN+ G S ++ A+ LDLIG+V G AE++F L + +K+ + YG+LLN YVR +
Sbjct: 82 WMNETGVCV-FSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQ 140
Query: 582 SRDKAEALIDTMRQKGYALHPLPFNVMMALYMNLREYDKVDAMVFEMKQKDIRLDIHSYN 761
+ +K+ + M++ G+ L +N +M LY N+ +++KV ++ EMK++++ D +SY
Sbjct: 141 NVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYR 200
Query: 762 IWLSSCSSVDQMELV---YHQMKSDVSINPNWTTFST---MYIKMGESQKAEDALRKVEA 923
I +++ ++ +E + M+ I +W T++ YI G+ +A + L+ E
Sbjct: 201 ICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSEN 260
Query: 924 RITGRNRIPYHYLLSLYGSLGNVKELFRVWNVYKSVVPSIPNLGYHALVSSLVRMGDIEG 1103
R+ ++ Y++L++LY LG E+ R+W++ K V N Y ++ SLV++ +
Sbjct: 261 RLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVE 320
Query: 1104 AEKYM 1118
AE+ +
Sbjct: 321 AEEVL 325
>TAIR9_protein||AT1G28020.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:9768395-9771157 REVERSE
Length = 613
Score = 162 bits (408), Expect = 9e-040
Identities = 101/283 (35%), Positives = 156/283 (55%), Gaps = 9/283 (3%)
Frame = +3
Query: 288 VLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEVYDWMNQRGERFRLSASDAAIQLDL 467
VL QW + G ++ + ++K+LR + QAL+V +WM++ + L D A +L L
Sbjct: 55 VLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKE-KICNLIPEDFAARLHL 113
Query: 468 IGKVRGISDAEDFFLTLPDNFKDRRVYGSLLNAYVRA-KSRDKAEALIDTMRQKGYALHP 644
I V G+ +AE FF ++P N + VY SLLN+Y R+ K+ KAEA MR G L P
Sbjct: 114 IENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLRP 173
Query: 645 LPFNVMMALYMNLREYDKVDAMVFEMKQKDIRLDIHSYNIWL---SSCSSVDQMELVYHQ 815
+P+N MM+LY L+ +KV+ ++ EMK D+ D + N L S+ V +ME ++
Sbjct: 174 VPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNK 233
Query: 816 MKSDVSINPNWTTFSTM---YIKMGESQKAEDALRKVEARITGRN-RIPYHYLLSLYGSL 983
+ I W T M Y++ S KA LR E + ++ + Y +L+ LYG
Sbjct: 234 WEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYGEA 293
Query: 984 GNVKELFRVWNVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEK 1112
GN +E+ RVW +YKS + N GY ++ SL+++ DI GAE+
Sbjct: 294 GNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEE 336
>TAIR9_protein||AT5G09450.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:2941864-2943324 FORWARD
Length = 410
Score = 160 bits (404), Expect = 3e-039
Identities = 97/297 (32%), Positives = 162/297 (54%), Gaps = 9/297 (3%)
Frame = +3
Query: 246 KISLMEKPELGAASVLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEVYDWMNQRGER 425
+I + P+ A +VL +W G ++T EL + KELR+ +R ALEV +WM Q E
Sbjct: 60 RIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQH-EE 118
Query: 426 FRLSASDAAIQLDLIGKVRGISDAEDFFLTLPDNFKDRRVYGSLLNAYVRAKSRDKAEAL 605
++S +D A ++DLI KV GI AE +F L + K Y SLL+AY +K ++AEAL
Sbjct: 119 SKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAEAL 178
Query: 606 ID-TMRQKGYALHPLPFNVMMALYMNLREYDKVDAMVFEMKQKDIRLDIHSYNIWLSSCS 782
+ + +N MM LYM++ + +KV ++ +KQK + DI +YN+WLSSC+
Sbjct: 179 FKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCA 238
Query: 783 ---SVDQMELVYHQMKSDVSINPNWTTF---STMYIKMGESQKAEDALR-KVEARITGRN 941
++D++ + +M+ D S N W + +++YI AE L + E I+ R
Sbjct: 239 ATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQRE 298
Query: 942 RIPYHYLLSLYGSLGNVKELFRVWNVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEK 1112
I Y +L+ L+ LGN + ++W ++ + + Y ++SS + +G + AE+
Sbjct: 299 WITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEE 355
>TAIR9_protein||AT2G20710.2 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr2:8926535-8927722 FORWARD
Length = 396
Score = 151 bits (380), Expect = 2e-036
Identities = 86/236 (36%), Positives = 140/236 (59%), Gaps = 8/236 (3%)
Frame = +3
Query: 432 LSASDAAIQLDLIGKVRGISDAEDFFLTLPDNFKDRRVYGSLLNAYVRAKSRDKAEALID 611
+S D AI+LDLI KV G+ +AE FF T+P ++ +YG+LLN Y K KAE +
Sbjct: 9 ISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQ 68
Query: 612 TMRQKGYALHPLPFNVMMALYMNLREYDKVDAMVFEMKQKDIRLDIHSYNIWL---SSCS 782
M++ G+ LP+NVM+ LY+ +Y V+ ++ EM+ + ++ DI + N L S S
Sbjct: 69 EMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVS 128
Query: 783 SVDQMELVYHQMKSDVSINPNWTTFSTM---YIKMGESQKAEDALRKVEARITGRNR-IP 950
V+ ME + ++D ++ +W T++ YIK G ++KA + LRK E + + R
Sbjct: 129 DVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHA 188
Query: 951 YHYLLSLYGSLGNVKELFRVWNVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKYM 1118
Y L+S YG+ G +E++R+W++YK + N GY +++S+L++M DIE EK M
Sbjct: 189 YEVLMSFYGAAGKKEEVYRLWSLYKE-LDGFYNTGYISVISALLKMDDIEEVEKIM 243
>TAIR9_protein||AT1G15480.1 | Symbols: | DNA binding | chr1:5318307-5320422
FORWARD
Length = 595
Score = 111 bits (277), Expect = 1e-024
Identities = 75/281 (26%), Positives = 147/281 (52%), Gaps = 13/281 (4%)
Frame = +3
Query: 273 LGAASVLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEVYDWMNQRGERFRLSASDAA 452
L S L++W + G+ + E + +LRK + +AL++ +W+++ ++F + D A
Sbjct: 140 LSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDE-NKQFEMEERDYA 198
Query: 453 IQLDLIGKVRGISDAEDFFLTLPDNFKDRRVYGSLLNAYVRAKSRDKAEALIDTMRQKGY 632
+LDLI KVRG E + T+P++F+ VY +LL +V + AEA+ + M+ G+
Sbjct: 199 CRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGF 258
Query: 633 ALHPLPFNVMMALYMNLREYDKVDAMVFEMKQKDIRLDIHSYNIWL---SSCSSVDQMEL 803
L N M+ LY + + K+ ++ +++++++ ++++Y I + S + + ME
Sbjct: 259 PLSTFTCNQMLILYKRV-DKKKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQ 317
Query: 804 VYHQMKSD-VSINPN-WTTFSTMYIKMGESQKAEDALRKVEARITGRNRIPYHYLLSLYG 977
+ MKS+ V ++ + Y G +KAE L+++E NR LLS+YG
Sbjct: 318 IVETMKSEGVELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSVYG 377
Query: 978 SLGNVKELFRVWNVYKSVVPSIPNLGYHALVSSLVRMGDIE 1100
L E+ RVW + + N Y+ ++++++ G I+
Sbjct: 378 YLQREDEVRRVWKICEE------NPRYNEVLAAILAFGKID 412
>TAIR9_protein||AT3G11380.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:3564079-3565779 FORWARD
Length = 542
Score = 101 bits (251), Expect = 1e-021
Identities = 59/161 (36%), Positives = 93/161 (57%), Gaps = 9/161 (5%)
Frame = +3
Query: 285 SVLNQW----EKGGRKLTKWELCRVVKELRKYKRPNQALEVYDWMNQRGERFRLSASDAA 452
+VL QW ++ G++L L +V++LR RP QALEV DWM + ++ D +
Sbjct: 57 TVLEQWLQQQQQQGKQLNPSLLRGIVEKLRSSNRPRQALEVSDWMVE--QKMYNLPEDFS 114
Query: 453 IQLDLIGKVRGISDAEDFFLTLPDNFKDRRVYGSLLNAYVR---AKSRDKAEALIDTMRQ 623
+ L KV + +AE FF ++P+N + +Y SLL +Y R K+ KAE++ M++
Sbjct: 115 ARFHLTEKVLNLEEAEKFFESIPENMRFESMYNSLLRSYARQSGEKALKKAESVFKKMKK 174
Query: 624 KGYALHPLPFNVMMALYMNLREYDKVDAMVFEMKQKDIRLD 746
G L P P+N M +LY +L DKVD ++ EMK+ ++ LD
Sbjct: 175 LGLLLRPSPYNSMTSLYSSLGNRDKVDEILREMKENNVELD 215
>TAIR9_protein||AT3G15590.1 | Symbols: | DNA-binding protein, putative |
chr3:5275568-5277658 REVERSE
Length = 611
Score = 90 bits (222), Expect = 3e-018
Identities = 63/250 (25%), Positives = 130/250 (52%), Gaps = 14/250 (5%)
Frame = +3
Query: 288 VLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEVYDWMNQRGERFRLSASDAAIQLDL 467
VL +W K G+ L++ E+ + LRK K L++++W+ +F + ++ A QLDL
Sbjct: 160 VLEKWVKEGKDLSQAEVTLAIHNLRKRKSYAMCLQLWEWLG-ANTQFEFTEANYASQLDL 218
Query: 468 IGKVRGISDAEDFFLTLPDNFKDRRVYGSLLNAYVRAKSRDKAEALIDTMRQKGYALHPL 647
+ KV + AE F +P++ + VY +LL V +KAE + + M++ +
Sbjct: 219 VAKVHSLQKAEIFLKDIPESSRGEVVYRTLLANCVLKHHVNKAEDIFNKMKELKFPTSVF 278
Query: 648 PFNVMMALYMNLREYDKVDAMVFEMKQKDIRLDIHSYNIWLSS---CSSVDQMELVYHQM 818
N ++ LY ++ + K+ ++ M++++I+ +Y+ ++S + ME + +
Sbjct: 279 ACNQLLLLY-SMHDRKKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKIVETI 337
Query: 819 KSD-VSINPN-WTTFSTMYIKMGESQKAEDALRKVEARITGRNRIPY--HYLLSLYGSLG 986
K + + ++P + + YI+ G ++A+D ++++E + G + P+ LL LY +G
Sbjct: 338 KEEGIELDPELQSILAKYYIRAGLKERAQDLMKEIEGK--GLQQTPWVCRSLLPLYADIG 395
Query: 987 ---NVKELFR 1007
NV+ L R
Sbjct: 396 DSDNVRRLSR 405
>TAIR9_protein||AT1G43010.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:16153609-16154468 FORWARD
Length = 258
Score = 85 bits (208), Expect = 1e-016
Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 5/172 (2%)
Frame = +3
Query: 288 VLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEVYDWMNQRGERFRLSASDAAIQLDL 467
+L QW K G ++ L ++K L K ALE WM + F D A QL L
Sbjct: 55 LLEQWRKQGYEVNPSHLRGLIKNLSDCKNFTTALEASKWMFKHSV-FDNFPEDCAAQLHL 113
Query: 468 IGKVRGISDAEDFFLTLPDNFKDRRVYGSLLNAYVR-AKSRDKAEALIDTMRQKGYALHP 644
+ V G+ +AE F +P+ +D Y LL++Y + ++ DKAEA MR+ G+ L P
Sbjct: 114 VNTVLGLEEAEKMFKNIPEKMRD---YSVLLSSYTKPVRTVDKAEATFKKMRELGFLLKP 170
Query: 645 LPFNVMMALYMNLREYDKVDAMVFEMKQKDIRLDIHSYNIWLSSCSSVDQME 800
FN M+ LY L+ D V+ +++++K+ ++ + N ++++ ME
Sbjct: 171 YLFNSMICLYGQLQRLDMVEKLLYKLKKNNMEVGSLKVNNVSRVYANINAME 222
>TAIR9_protein||AT1G13040.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:4447647-4449200 FORWARD
Length = 518
Score = 50 bits (118), Expect = 4e-006
Identities = 39/193 (20%), Positives = 86/193 (44%), Gaps = 5/193 (2%)
Frame = +3
Query: 543 VYGSLLNAYVRAKSRDKAEALIDTMRQKGYALHPLPFNVMMALYMNLREYDKVDAMVFEM 722
VY +L++ + +A +KAEAL M + G + +NV++ Y + + + ++ EM
Sbjct: 222 VYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEM 281
Query: 723 KQKDIRLDIHSYNIWLSSCSSVDQMELVYHQMKSDVSIN-----PNWTTFSTMYIKMGES 887
+ I+LD +SYN L V + Y+ M ++ +++T + + +
Sbjct: 282 VRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNT 341
Query: 888 QKAEDALRKVEARITGRNRIPYHYLLSLYGSLGNVKELFRVWNVYKSVVPSIPNLGYHAL 1067
+KA ++ + N + Y L+ + GN ++ + + S + Y +
Sbjct: 342 RKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTI 401
Query: 1068 VSSLVRMGDIEGA 1106
+ L + G+++ A
Sbjct: 402 LDHLCKSGNVDKA 414
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,396,250,766
Number of Sequences: 33410
Number of Extensions: 9396250766
Number of Successful Extensions: 317353041
Number of sequences better than 0.0: 0
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