BLASTX 7.6.2
Query= UN18096 /QuerySize=1452
(1451 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 P... 169 5e-041
sp|P70318|TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus GN=Tial1 P... 142 9e-033
sp|P32588|PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-... 135 1e-030
sp|P31483|TIA1_HUMAN Nucleolysin TIA-1 isoform p40 OS=Homo sapie... 102 1e-020
sp|P52912|TIA1_MOUSE Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 P... 102 1e-020
sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein OS=Cric... 71 2e-011
sp|P60824|CIRBP_MOUSE Cold-inducible RNA-binding protein OS=Mus ... 71 2e-011
sp|P60825|CIRBP_RAT Cold-inducible RNA-binding protein OS=Rattus... 71 2e-011
sp|Q28IQ9|CIRBP_XENTR Cold-inducible RNA-binding protein OS=Xeno... 70 3e-011
sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitocho... 70 3e-011
sp|Q0P5L0|RBM42_BOVIN RNA-binding protein 42 OS=Bos taurus GN=RB... 70 3e-011
sp|Q9BTD8|RBM42_HUMAN RNA-binding protein 42 OS=Homo sapiens GN=... 70 3e-011
sp|Q91V81|RBM42_MOUSE RNA-binding protein 42 OS=Mus musculus GN=... 70 3e-011
sp|Q6AXT7|RBM42_RAT RNA-binding protein 42 OS=Rattus norvegicus ... 70 3e-011
sp|Q14011|CIRBP_HUMAN Cold-inducible RNA-binding protein OS=Homo... 70 3e-011
sp|Q5RF83|CIRBP_PONAB Cold-inducible RNA-binding protein OS=Pong... 70 3e-011
sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropical... 70 3e-011
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=... 70 3e-011
sp|Q9DED4|CIRBB_XENLA Cold-inducible RNA-binding protein B OS=Xe... 70 5e-011
sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Bra... 70 5e-011
>sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1
Length = 375
Score = 169 bits (427), Expect = 5e-041
Identities = 82/172 (47%), Positives = 119/172 (69%), Gaps = 3/172 (1%)
Frame = +2
Query: 230 DPSTCRSVYVGNIHIQVTEPLLQEIFTSTGPVESSKLIRKDKSS--YGFVHYFDRRSAAL 403
D R++YVGN+ VTE L+ ++F+ GP +S K+I + S+ Y FV +++ R AA
Sbjct: 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAA 63
Query: 404 AILSLNGRHLFGQPIKVNWAYA-TGQREDTSSHFNIFVGDLSPEVTDAALYQIFSVFSTC 580
A+ ++NGR + G+ +KVNWA + Q++DTS+HF++FVGDLSPE+T + F+ F
Sbjct: 64 ALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKI 123
Query: 581 SDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATK 736
SDARV+ D TG+S+G+GFVSF N+ DA+ AI M G+WL RQIR NWAT+
Sbjct: 124 SDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR 175
>sp|P70318|TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus GN=Tial1 PE=2 SV=1
Length = 392
Score = 142 bits (356), Expect = 9e-033
Identities = 67/136 (49%), Positives = 93/136 (68%), Gaps = 1/136 (0%)
Frame = +2
Query: 332 SKLIRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYA-TGQREDTSSHFNI 508
S L Y FV +++ R AA A+ ++NGR + G+ +KVNWA + Q++DTS+HF++
Sbjct: 57 SVLQHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHV 116
Query: 509 FVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMN 688
FVGDLSPE+T + F+ F SDARV+ D TG+S+G+GFVSF N+ DA+ AI M
Sbjct: 117 FVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMG 176
Query: 689 GKWLSSRQIRCNWATK 736
G+WL RQIR NWAT+
Sbjct: 177 GQWLGGRQIRTNWATR 192
>sp|P32588|PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-binding protein
PUB1 OS=Saccharomyces cerevisiae GN=PUB1 PE=1 SV=3
Length = 453
Score = 135 bits (338), Expect = 1e-030
Identities = 71/182 (39%), Positives = 110/182 (60%), Gaps = 5/182 (2%)
Frame = +2
Query: 200 VPSGNLPPGFDPSTCRSVYVGNIHIQVTEPLLQEIFTSTGPVESSKLI--RKDKS-SYGF 370
VP+ + G + S R +YVGN+ +TE +L++ F GP+ + K++ + +K+ +Y F
Sbjct: 61 VPANAITGGRETSD-RVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAF 119
Query: 371 VHYFDRRSAALAILSLNGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAAL 550
V Y A +A+ +LNG+ + +K+NWA+ + Q+ + FN+FVGDL+ V D L
Sbjct: 120 VEYHQSHDANIALQTLNGKQIENNIVKINWAFQS-QQSSSDDTFNLFVGDLNVNVDDETL 178
Query: 551 YQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWA 730
F F + VMWD +TG SRG+GFVSF +Q DAQ A++ M G+ L+ R +R NWA
Sbjct: 179 RNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWA 238
Query: 731 TK 736
K
Sbjct: 239 AK 240
>sp|P31483|TIA1_HUMAN Nucleolysin TIA-1 isoform p40 OS=Homo sapiens GN=TIA1 PE=1
SV=3
Length = 386
Score = 102 bits (252), Expect = 1e-020
Identities = 47/99 (47%), Positives = 66/99 (66%)
Frame = +2
Query: 488 TSSHFNIFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 667
+ HF++FVGDLSPE+T + F+ F SDARV+ D TG+S+G+GFVSF N+ DA+
Sbjct: 102 SQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAE 161
Query: 668 TAINEMNGKWLSSRQIRCNWATKGATSGEDKLSSDGKSV 784
AI +M G+WL RQIR NWAT+ + + S+ K +
Sbjct: 162 NAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQL 200
>sp|P52912|TIA1_MOUSE Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 PE=1 SV=1
Length = 386
Score = 102 bits (252), Expect = 1e-020
Identities = 47/99 (47%), Positives = 66/99 (66%)
Frame = +2
Query: 488 TSSHFNIFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 667
+ HF++FVGDLSPE+T + F+ F SDARV+ D TG+S+G+GFVSF N+ DA+
Sbjct: 102 SQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAE 161
Query: 668 TAINEMNGKWLSSRQIRCNWATKGATSGEDKLSSDGKSV 784
AI +M G+WL RQIR NWAT+ + + S+ K +
Sbjct: 162 NAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQL 200
>sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein OS=Cricetulus griseus
GN=CIRBP PE=2 SV=1
Length = 172
Score = 71 bits (173), Expect = 2e-011
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = +2
Query: 491 SSHFNIFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQT 670
S +FVG LS + + AL Q+FS + S+ V+ D++T RSRGFGFV+F N DA+
Sbjct: 3 SDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 671 AINEMNGKWLSSRQIRCNWATKGA 742
A+ MNGK + RQIR + A K +
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSS 86
>sp|P60824|CIRBP_MOUSE Cold-inducible RNA-binding protein OS=Mus musculus
GN=Cirbp PE=1 SV=1
Length = 172
Score = 71 bits (173), Expect = 2e-011
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = +2
Query: 491 SSHFNIFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQT 670
S +FVG LS + + AL Q+FS + S+ V+ D++T RSRGFGFV+F N DA+
Sbjct: 3 SDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 671 AINEMNGKWLSSRQIRCNWATKGA 742
A+ MNGK + RQIR + A K +
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSS 86
>sp|P60825|CIRBP_RAT Cold-inducible RNA-binding protein OS=Rattus norvegicus
GN=Cirbp PE=2 SV=1
Length = 172
Score = 71 bits (173), Expect = 2e-011
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = +2
Query: 491 SSHFNIFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQT 670
S +FVG LS + + AL Q+FS + S+ V+ D++T RSRGFGFV+F N DA+
Sbjct: 3 SDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 671 AINEMNGKWLSSRQIRCNWATKGA 742
A+ MNGK + RQIR + A K +
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSS 86
>sp|Q28IQ9|CIRBP_XENTR Cold-inducible RNA-binding protein OS=Xenopus tropicalis
GN=cirbp PE=2 SV=1
Length = 166
Score = 70 bits (171), Expect = 3e-011
Identities = 35/79 (44%), Positives = 54/79 (68%)
Frame = +2
Query: 506 IFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 685
+FVG L+ E T+ +L Q+FS + ++ V+ D+++ RSRGFGFV+F N +DA+ A+ M
Sbjct: 8 LFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAM 67
Query: 686 NGKWLSSRQIRCNWATKGA 742
NGK + RQIR + A K +
Sbjct: 68 NGKSVDGRQIRVDQAGKSS 86
>sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial
OS=Arabidopsis thaliana GN=GRP2 PE=1 SV=1
Length = 158
Score = 70 bits (171), Expect = 3e-011
Identities = 36/73 (49%), Positives = 50/73 (68%)
Frame = +2
Query: 506 IFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 685
+F+G LS DA+L F+ F DA+V+ D++TGRSRGFGFV+F ++ A AI+EM
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96
Query: 686 NGKWLSSRQIRCN 724
+GK L+ R IR N
Sbjct: 97 DGKELNGRHIRVN 109
>sp|Q0P5L0|RBM42_BOVIN RNA-binding protein 42 OS=Bos taurus GN=RBM42 PE=2 SV=1
Length = 448
Score = 70 bits (171), Expect = 3e-011
Identities = 34/73 (46%), Positives = 50/73 (68%)
Frame = +2
Query: 500 FNIFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIN 679
F IF GDL EV D L + FS F + A+V+ D++TG+++G+GFVSF++ D A+
Sbjct: 349 FRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMR 408
Query: 680 EMNGKWLSSRQIR 718
EMNGK++ SR I+
Sbjct: 409 EMNGKYVGSRPIK 421
>sp|Q9BTD8|RBM42_HUMAN RNA-binding protein 42 OS=Homo sapiens GN=RBM42 PE=1
SV=1
Length = 480
Score = 70 bits (171), Expect = 3e-011
Identities = 34/73 (46%), Positives = 50/73 (68%)
Frame = +2
Query: 500 FNIFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIN 679
F IF GDL EV D L + FS F + A+V+ D++TG+++G+GFVSF++ D A+
Sbjct: 381 FRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMR 440
Query: 680 EMNGKWLSSRQIR 718
EMNGK++ SR I+
Sbjct: 441 EMNGKYVGSRPIK 453
>sp|Q91V81|RBM42_MOUSE RNA-binding protein 42 OS=Mus musculus GN=Rbm42 PE=1
SV=1
Length = 474
Score = 70 bits (171), Expect = 3e-011
Identities = 34/73 (46%), Positives = 50/73 (68%)
Frame = +2
Query: 500 FNIFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIN 679
F IF GDL EV D L + FS F + A+V+ D++TG+++G+GFVSF++ D A+
Sbjct: 375 FRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMR 434
Query: 680 EMNGKWLSSRQIR 718
EMNGK++ SR I+
Sbjct: 435 EMNGKYVGSRPIK 447
>sp|Q6AXT7|RBM42_RAT RNA-binding protein 42 OS=Rattus norvegicus GN=Rbm42 PE=1
SV=1
Length = 474
Score = 70 bits (171), Expect = 3e-011
Identities = 34/73 (46%), Positives = 50/73 (68%)
Frame = +2
Query: 500 FNIFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIN 679
F IF GDL EV D L + FS F + A+V+ D++TG+++G+GFVSF++ D A+
Sbjct: 375 FRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMR 434
Query: 680 EMNGKWLSSRQIR 718
EMNGK++ SR I+
Sbjct: 435 EMNGKYVGSRPIK 447
>sp|Q14011|CIRBP_HUMAN Cold-inducible RNA-binding protein OS=Homo sapiens
GN=CIRBP PE=1 SV=1
Length = 172
Score = 70 bits (170), Expect = 3e-011
Identities = 37/84 (44%), Positives = 53/84 (63%)
Frame = +2
Query: 491 SSHFNIFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQT 670
S +FVG LS + + +L Q+FS + S+ V+ D++T RSRGFGFV+F N DA+
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 671 AINEMNGKWLSSRQIRCNWATKGA 742
A+ MNGK + RQIR + A K +
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSS 86
>sp|Q5RF83|CIRBP_PONAB Cold-inducible RNA-binding protein OS=Pongo abelii
GN=CIRBP PE=2 SV=1
Length = 172
Score = 70 bits (170), Expect = 3e-011
Identities = 37/84 (44%), Positives = 53/84 (63%)
Frame = +2
Query: 491 SSHFNIFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQT 670
S +FVG LS + + +L Q+FS + S+ V+ D++T RSRGFGFV+F N DA+
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 671 AINEMNGKWLSSRQIRCNWATKGA 742
A+ MNGK + RQIR + A K +
Sbjct: 63 AMMAMNGKSVDGRQIRVDQAGKSS 86
>sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropicalis GN=rbm42
PE=2 SV=1
Length = 392
Score = 70 bits (170), Expect = 3e-011
Identities = 34/76 (44%), Positives = 51/76 (67%)
Frame = +2
Query: 491 SSHFNIFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQT 670
S F IF GDL EV D L + FS + + A+V+ D++TG+++G+GFVSF++ D
Sbjct: 290 SDDFRIFCGDLGNEVNDDILARAFSRYPSFLRAKVIRDKRTGKTKGYGFVSFKDPNDYVR 349
Query: 671 AINEMNGKWLSSRQIR 718
A+ EMNGK++ SR I+
Sbjct: 350 AMREMNGKYVGSRPIK 365
>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
thaliana GN=RBP29 PE=1 SV=2
Length = 342
Score = 70 bits (170), Expect = 3e-011
Identities = 38/107 (35%), Positives = 61/107 (57%)
Frame = +2
Query: 434 FGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKT 613
+G + ++ +G + S ++VG+LS V D AL +F+ +ARV++D+ +
Sbjct: 235 YGGSQRSSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDS 294
Query: 614 GRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGE 754
GRS+GFGFV+ + Q+ Q AIN +NG L RQIR + A G+
Sbjct: 295 GRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPRGQ 341
>sp|Q9DED4|CIRBB_XENLA Cold-inducible RNA-binding protein B OS=Xenopus laevis
GN=cirbp-b PE=1 SV=1
Length = 166
Score = 70 bits (169), Expect = 5e-011
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Frame = +2
Query: 491 SSHFNIFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQT 670
S +F+G L+ + + +L Q+FS + S+ V+ D++T RSRGFGFV+F N DA+
Sbjct: 2 SDEGKLFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKD 61
Query: 671 AINEMNGKWLSSRQIRCNWATKGATSGE 754
A+ MNGK + RQIR + A G +SG+
Sbjct: 62 AMMAMNGKAVDGRQIRVDQA--GKSSGD 87
>sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Brassica napus
GN=GRP10 PE=2 SV=1
Length = 169
Score = 70 bits (169), Expect = 5e-011
Identities = 36/84 (42%), Positives = 52/84 (61%)
Frame = +2
Query: 500 FNIFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIN 679
+ FVG L+ DA L + FS F D++++ D++TGRSRGFGFV+F++++ + AI+
Sbjct: 6 YRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAID 65
Query: 680 EMNGKWLSSRQIRCNWATKGATSG 751
EMNGK L R I N A G
Sbjct: 66 EMNGKELDGRTITVNEAQSRGGGG 89
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,436,365,428
Number of Sequences: 518415
Number of Extensions: 75436365428
Number of Successful Extensions: 513409628
Number of sequences better than 0.0: 0
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