BLASTX 7.6.2
Query= UN18096 /QuerySize=1452
(1451 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G14100.1 | Symbols: | oligouridylate-binding ... 797 5e-231
TAIR9_protein||AT1G54080.1 | Symbols: UBP1A | oligouridylate-bin... 706 1e-203
TAIR9_protein||AT1G54080.2 | Symbols: UBP1A | oligouridylate-bin... 700 6e-202
TAIR9_protein||AT1G17370.1 | Symbols: UBP1B | UBP1B (oligouridyl... 689 2e-198
TAIR9_protein||AT1G17370.2 | Symbols: UBP1B | UBP1B (oligouridyl... 680 8e-196
TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 78 1e-014
TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 78 1e-014
TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 72 1e-012
TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR... 70 2e-012
TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 70 2e-012
TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 70 2e-012
TAIR9_protein||AT5G04280.1 | Symbols: | glycine-rich RNA-bindin... 70 2e-012
TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding /... 70 3e-012
TAIR9_protein||AT3G04500.1 | Symbols: | RNA recognition motif (... 70 3e-012
TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding /... 70 3e-012
TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotei... 67 3e-011
TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP... 67 3e-011
TAIR9_protein||AT4G39260.2 | Symbols: CCR1, ATGRP8, GRP8 | GR-RB... 67 3e-011
>TAIR9_protein||AT3G14100.1 | Symbols: | oligouridylate-binding protein,
putative | chr3:4673027-4675950 FORWARD
Length = 428
Score = 797 bits (2057), Expect = 5e-231
Identities = 398/429 (92%), Positives = 404/429 (94%), Gaps = 7/429 (1%)
Frame = +2
Query: 77 MQNPRFR--QQQQQQAMMQQQQALMQQHSLYHPGVLAPHQLEPVPSGNLPPGFDPSTCRS 250
MQNPR + QQQQQQ M QQQALMQQHSLYHPGVLAP QLEPVPSGNLPPGFDPSTCRS
Sbjct: 1 MQNPRLKQHQQQQQQQAMMQQQALMQQHSLYHPGVLAPPQLEPVPSGNLPPGFDPSTCRS 60
Query: 251 VYVGNIHIQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRH 430
VYVGNIH QVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRH
Sbjct: 61 VYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRH 120
Query: 431 LFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQK 610
LFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDA LYQ FSVFS+CSDARVMWDQK
Sbjct: 121 LFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQK 180
Query: 611 TGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGEDKLSSDGKSVVE 790
TGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSG+DKLSSDGKSVVE
Sbjct: 181 TGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVE 240
Query: 791 LTTGSSEDGKEPLDEDAPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQR 970
LTTGSSEDGKE L+E+ PENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQR
Sbjct: 241 LTTGSSEDGKETLNEETPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQR 300
Query: 971 DKGFGFVRYNTHPEAALAIQMGNFQPYLFNRQIKCSWGSKPTPPGTASNPLPPPAPAPVF 1150
DKGFGFVRYNTHPEAALAIQMGN QPYLFNRQIKCSWG+KPTPPGTASNPLPPPAPAPV
Sbjct: 301 DKGFGFVRYNTHPEAALAIQMGNTQPYLFNRQIKCSWGNKPTPPGTASNPLPPPAPAPVP 360
Query: 1151 GLSAADFLAYERQLALSKM----ALMHPQGQHPLRQAAHGINGAGATAAMYDGGFQNVAA 1318
GLSAAD L YERQLALSKM ALMH QGQHPLRQ AHGIN AGATAAMYDGGFQNVAA
Sbjct: 361 GLSAADLLNYERQLALSKMASVNALMHQQGQHPLRQ-AHGINAAGATAAMYDGGFQNVAA 419
Query: 1319 AQQLMYYH* 1345
AQQLMYY *
Sbjct: 420 AQQLMYYQ* 428
>TAIR9_protein||AT1G54080.1 | Symbols: UBP1A | oligouridylate-binding protein,
putative | chr1:20183923-20186824 REVERSE
Length = 427
Score = 706 bits (1821), Expect = 1e-203
Identities = 351/430 (81%), Positives = 379/430 (88%), Gaps = 10/430 (2%)
Frame = +2
Query: 77 MQNPRFRQQQQQQAMMQQ-----QQALMQQH-SLYHPGVLAPHQLEPVPSGNLPPGFDPS 238
MQN R +QQQQQ Q QQA+MQQH SLYHPGV+AP Q+EP+PSGNLPPGFDP+
Sbjct: 1 MQNQRLIKQQQQQQQQQHQQAMIQQAMMQQHPSLYHPGVMAPPQMEPLPSGNLPPGFDPT 60
Query: 239 TCRSVYVGNIHIQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSL 418
TCRSVY GNIH QVTE LLQEIF STGP+ES KLIRKDKSSYGFVHYFDRR A++AI++L
Sbjct: 61 TCRSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTL 120
Query: 419 NGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALYQIFSVFSTCSDARVM 598
NGRH+FGQP+KVNWAYATGQREDTSSHFNIFVGDLSPEVTDAAL+ FS F++CSDARVM
Sbjct: 121 NGRHIFGQPMKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSDARVM 180
Query: 599 WDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGEDKLSSDGK 778
WDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKW+SSRQIRCNWATKGAT GEDK SSDGK
Sbjct: 181 WDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGK 240
Query: 779 SVVELTTGSSEDGKEPLDEDAPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEV 958
SVVELT GSSEDG+E +EDAPENN QFTTVYVGNL+PEVTQLDLHR F+ LGAGVIEEV
Sbjct: 241 SVVELTNGSSEDGRELSNEDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEV 300
Query: 959 RVQRDKGFGFVRYNTHPEAALAIQMGNFQPYLFNRQIKCSWGSKPTPPGTASNPLPPPAP 1138
RVQRDKGFGFVRYNTH EAALAIQMGN QP+LF+RQI+CSWG+KPTP GTASNPLPPPAP
Sbjct: 301 RVQRDKGFGFVRYNTHDEAALAIQMGNAQPFLFSRQIRCSWGNKPTPSGTASNPLPPPAP 360
Query: 1139 APVFGLSAADFLAYERQLALSKMALMHPQGQHPLRQAAHGINGAGATAAMYDGGFQNVAA 1318
A V LSA D LAYERQLAL+K MHPQ QH LRQA G+N AG TAAMYDGG+QNVAA
Sbjct: 361 ASVPSLSAMDLLAYERQLALAK---MHPQAQHSLRQAGLGVNVAGGTAAMYDGGYQNVAA 417
Query: 1319 A-QQLMYYH* 1345
A QQLMYY *
Sbjct: 418 AHQQLMYYQ* 427
>TAIR9_protein||AT1G54080.2 | Symbols: UBP1A | oligouridylate-binding protein,
putative | chr1:20183923-20186824 REVERSE
Length = 431
Score = 700 bits (1806), Expect = 6e-202
Identities = 351/434 (80%), Positives = 379/434 (87%), Gaps = 14/434 (3%)
Frame = +2
Query: 77 MQNPRFRQQQQQQAMMQQ-----QQALMQQH-SLYHPGVLAPHQLEPVPSGNLPPGFDPS 238
MQN R +QQQQQ Q QQA+MQQH SLYHPGV+AP Q+EP+PSGNLPPGFDP+
Sbjct: 1 MQNQRLIKQQQQQQQQQHQQAMIQQAMMQQHPSLYHPGVMAPPQMEPLPSGNLPPGFDPT 60
Query: 239 TCRSVYVGNIHIQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSL 418
TCRSVY GNIH QVTE LLQEIF STGP+ES KLIRKDKSSYGFVHYFDRR A++AI++L
Sbjct: 61 TCRSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTL 120
Query: 419 NGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALYQIFSVFSTCS----D 586
NGRH+FGQP+KVNWAYATGQREDTSSHFNIFVGDLSPEVTDAAL+ FS F++CS D
Sbjct: 121 NGRHIFGQPMKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSSYYRD 180
Query: 587 ARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGEDKLS 766
ARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKW+SSRQIRCNWATKGAT GEDK S
Sbjct: 181 ARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHS 240
Query: 767 SDGKSVVELTTGSSEDGKEPLDEDAPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGV 946
SDGKSVVELT GSSEDG+E +EDAPENN QFTTVYVGNL+PEVTQLDLHR F+ LGAGV
Sbjct: 241 SDGKSVVELTNGSSEDGRELSNEDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGV 300
Query: 947 IEEVRVQRDKGFGFVRYNTHPEAALAIQMGNFQPYLFNRQIKCSWGSKPTPPGTASNPLP 1126
IEEVRVQRDKGFGFVRYNTH EAALAIQMGN QP+LF+RQI+CSWG+KPTP GTASNPLP
Sbjct: 301 IEEVRVQRDKGFGFVRYNTHDEAALAIQMGNAQPFLFSRQIRCSWGNKPTPSGTASNPLP 360
Query: 1127 PPAPAPVFGLSAADFLAYERQLALSKMALMHPQGQHPLRQAAHGINGAGATAAMYDGGFQ 1306
PPAPA V LSA D LAYERQLAL+K MHPQ QH LRQA G+N AG TAAMYDGG+Q
Sbjct: 361 PPAPASVPSLSAMDLLAYERQLALAK---MHPQAQHSLRQAGLGVNVAGGTAAMYDGGYQ 417
Query: 1307 NVAAA-QQLMYYH* 1345
NVAAA QQLMYY *
Sbjct: 418 NVAAAHQQLMYYQ* 431
Score = 698 bits (1800), Expect = 3e-201
Identities = 350/431 (81%), Positives = 381/431 (88%), Gaps = 11/431 (2%)
Frame = +2
Query: 65 ERKKMQNPRFRQQQQQQAMMQQQQALMQQH-SLYHPGVLAPHQLEPVPSGNLPPGFDPST 241
+R Q + +QQQ QQAM+ QQA+MQQH SLYHPGV+AP Q+EP+PSGNLPPGFDP+T
Sbjct: 4 QRLIKQQQQQQQQQHQQAMI--QQAMMQQHPSLYHPGVMAPPQMEPLPSGNLPPGFDPTT 61
Query: 242 CRSVYVGNIHIQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLN 421
CRSVY GNIH QVTE LLQEIF STGP+ES KLIRKDKSSYGFVHYFDRR A++AI++LN
Sbjct: 62 CRSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLN 121
Query: 422 GRHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALYQIFSVFSTCS----DA 589
GRH+FGQP+KVNWAYATGQREDTSSHFNIFVGDLSPEVTDAAL+ FS F++CS DA
Sbjct: 122 GRHIFGQPMKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSSYYRDA 181
Query: 590 RVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGEDKLSS 769
RVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKW+SSRQIRCNWATKGAT GEDK SS
Sbjct: 182 RVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSS 241
Query: 770 DGKSVVELTTGSSEDGKEPLDEDAPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVI 949
DGKSVVELT GSSEDG+E +EDAPENN QFTTVYVGNL+PEVTQLDLHR F+ LGAGVI
Sbjct: 242 DGKSVVELTNGSSEDGRELSNEDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVI 301
Query: 950 EEVRVQRDKGFGFVRYNTHPEAALAIQMGNFQPYLFNRQIKCSWGSKPTPPGTASNPLPP 1129
EEVRVQRDKGFGFVRYNTH EAALAIQMGN QP+LF+RQI+CSWG+KPTP GTASNPLPP
Sbjct: 302 EEVRVQRDKGFGFVRYNTHDEAALAIQMGNAQPFLFSRQIRCSWGNKPTPSGTASNPLPP 361
Query: 1130 PAPAPVFGLSAADFLAYERQLALSKMALMHPQGQHPLRQAAHGINGAGATAAMYDGGFQN 1309
PAPA V LSA D LAYERQLAL+K MHPQ QH LRQA G+N AG TAAMYDGG+QN
Sbjct: 362 PAPASVPSLSAMDLLAYERQLALAK---MHPQAQHSLRQAGLGVNVAGGTAAMYDGGYQN 418
Query: 1310 VAAA-QQLMYY 1339
VAAA QQLMYY
Sbjct: 419 VAAAHQQLMYY 429
>TAIR9_protein||AT1G17370.1 | Symbols: UBP1B | UBP1B (oligouridylate binding
protein 1B); mRNA 3'-UTR binding | chr1:5951842-5954825 REVERSE
Length = 420
Score = 689 bits (1776), Expect = 2e-198
Identities = 341/424 (80%), Positives = 372/424 (87%), Gaps = 11/424 (2%)
Frame = +2
Query: 89 RFRQQQQQQAMMQQQQALMQQHSLYHPGVLAPHQLEPVPSGNLPPGFDPSTCRSVYVGNI 268
R +QQQQQQ +M QQALMQQ SLYHPG+LAP Q+EP+PSGNLPPGFDPSTCRSVYVGNI
Sbjct: 3 RLKQQQQQQQVM-MQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNI 61
Query: 269 HIQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 448
HIQVTEPLLQE+F TGPVES KLIRK+KSSYGFVHYFDRRSA LAILSLNGRHLFGQPI
Sbjct: 62 HIQVTEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPI 121
Query: 449 KVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRG 628
KVNWAYA+GQREDTSSHFNIFVGDLSPEVTDA L+ FSV+ TCSDARVMWDQKTGRSRG
Sbjct: 122 KVNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRG 181
Query: 629 FGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGEDKLSSDGKSVVELTTGSS 808
FGFVSFRNQQDAQTAI+E+ GKWL SRQIRCNWATKGATSGEDK SSD KSVVELT+G S
Sbjct: 182 FGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGVS 241
Query: 809 EDGKEPLDEDAPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGF 988
EDGK+ + +APENN+Q+TTVYVGNLAPEV+Q+DLHR+FH+LGAGVIEEVRVQRDKGFGF
Sbjct: 242 EDGKDTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGF 301
Query: 989 VRYNTHPEAALAIQMGNFQPYLFNRQIKCSWGSKPTPPGTASNPLPPPAPAPVFGLSAAD 1168
VRY+TH EAALAIQMGN YL RQ+KCSWGSKPTP GTASNPLPPPAPAP+ G SA+D
Sbjct: 302 VRYSTHVEAALAIQMGNTHSYLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSASD 361
Query: 1169 FLAYERQLALSKMALM-----HPQGQHPLRQAAHGINGAGATAAMYDGGFQNVAAAQQLM 1333
LAYERQLA+SKMA M HPQGQH +QAA G G+ A+YDGG+QN AQQLM
Sbjct: 362 LLAYERQLAMSKMAGMNPMMHHPQGQHAFKQAAMG--ATGSNQAIYDGGYQN---AQQLM 416
Query: 1334 YYH* 1345
YY *
Sbjct: 417 YYQ* 420
>TAIR9_protein||AT1G17370.2 | Symbols: UBP1B | UBP1B (oligouridylate binding
protein 1B); mRNA 3'-UTR binding | chr1:5951842-5954825 REVERSE
Length = 417
Score = 680 bits (1753), Expect = 8e-196
Identities = 339/422 (80%), Positives = 369/422 (87%), Gaps = 15/422 (3%)
Frame = +2
Query: 95 RQQQQQQAMMQQQQALMQQHSLYHPGVLAPHQLEPVPSGNLPPGFDPSTCRSVYVGNIHI 274
+QQQQQQ MM QQALMQQ SLYHPG+LAP Q+EP+PSGNLPPGFDPSTCRSVYVGNIHI
Sbjct: 6 QQQQQQQVMM--QQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHI 63
Query: 275 QVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKV 454
QVTEPLLQE+F TGPVES KLIRK+KSSYGFVHYFDRRSA LAILSLNGRHLFGQPIKV
Sbjct: 64 QVTEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKV 123
Query: 455 NWAYATGQREDTSSHFNIFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFG 634
NWAYA+GQREDTSSHFNIFVGDLSPEVTDA L+ FSV+ TCSDARVMWDQKTGRSRGFG
Sbjct: 124 NWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFG 183
Query: 635 FVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGEDKLSSDGKSVVELTTGSSED 814
FVSFRNQQDAQTAI+E+ GKWL SRQIRCNWATKGATSGEDK SSD KSVVELT+G D
Sbjct: 184 FVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSG---D 240
Query: 815 GKEPLDEDAPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFVR 994
GK+ + +APENN+Q+TTVYVGNLAPEV+Q+DLHR+FH+LGAGVIEEVRVQRDKGFGFVR
Sbjct: 241 GKDTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVR 300
Query: 995 YNTHPEAALAIQMGNFQPYLFNRQIKCSWGSKPTPPGTASNPLPPPAPAPVFGLSAADFL 1174
Y+TH EAALAIQMGN YL RQ+KCSWGSKPTP GTASNPLPPPAPAP+ G SA+D L
Sbjct: 301 YSTHVEAALAIQMGNTHSYLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSASDLL 360
Query: 1175 AYERQLALSKMALM-----HPQGQHPLRQAAHGINGAGATAAMYDGGFQNVAAAQQLMYY 1339
AYERQLA+SKMA M HPQGQH +QAA G G+ A+YDGG+QN AQQLMYY
Sbjct: 361 AYERQLAMSKMAGMNPMMHHPQGQHAFKQAAMG--ATGSNQAIYDGGYQN---AQQLMYY 415
Query: 1340 H* 1345
*
Sbjct: 416 Q* 417
Score = 678 bits (1747), Expect = 4e-195
Identities = 338/421 (80%), Positives = 369/421 (87%), Gaps = 14/421 (3%)
Frame = +2
Query: 89 RFRQQQQQQAMMQQQQALMQQHSLYHPGVLAPHQLEPVPSGNLPPGFDPSTCRSVYVGNI 268
R +QQQQQQ +M QQALMQQ SLYHPG+LAP Q+EP+PSGNLPPGFDPSTCRSVYVGNI
Sbjct: 3 RLKQQQQQQQVM-MQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNI 61
Query: 269 HIQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 448
HIQVTEPLLQE+F TGPVES KLIRK+KSSYGFVHYFDRRSA LAILSLNGRHLFGQPI
Sbjct: 62 HIQVTEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPI 121
Query: 449 KVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRG 628
KVNWAYA+GQREDTSSHFNIFVGDLSPEVTDA L+ FSV+ TCSDARVMWDQKTGRSRG
Sbjct: 122 KVNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRG 181
Query: 629 FGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGEDKLSSDGKSVVELTTGSS 808
FGFVSFRNQQDAQTAI+E+ GKWL SRQIRCNWATKGATSGEDK SSD KSVVELT+G
Sbjct: 182 FGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSG-- 239
Query: 809 EDGKEPLDEDAPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGF 988
DGK+ + +APENN+Q+TTVYVGNLAPEV+Q+DLHR+FH+LGAGVIEEVRVQRDKGFGF
Sbjct: 240 -DGKDTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGF 298
Query: 989 VRYNTHPEAALAIQMGNFQPYLFNRQIKCSWGSKPTPPGTASNPLPPPAPAPVFGLSAAD 1168
VRY+TH EAALAIQMGN YL RQ+KCSWGSKPTP GTASNPLPPPAPAP+ G SA+D
Sbjct: 299 VRYSTHVEAALAIQMGNTHSYLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSASD 358
Query: 1169 FLAYERQLALSKMALM-----HPQGQHPLRQAAHGINGAGATAAMYDGGFQNVAAAQQLM 1333
LAYERQLA+SKMA M HPQGQH +QAA G G+ A+YDGG+QN AQQLM
Sbjct: 359 LLAYERQLAMSKMAGMNPMMHHPQGQHAFKQAAMG--ATGSNQAIYDGGYQN---AQQLM 413
Query: 1334 Y 1336
Y
Sbjct: 414 Y 414
>TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 78 bits (190), Expect = 1e-014
Identities = 41/90 (45%), Positives = 57/90 (63%)
Frame = +2
Query: 506 IFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 685
+FVG LS D++L Q F+ F ++A V+ D++TGRSRGFGFVSF + A AI EM
Sbjct: 37 LFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEM 96
Query: 686 NGKWLSSRQIRCNWATKGATSGEDKLSSDG 775
+GK L+ RQIR N AT+ +++ G
Sbjct: 97 DGKELNGRQIRVNLATERSSAPRSSFGGGG 126
>TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 78 bits (190), Expect = 1e-014
Identities = 41/90 (45%), Positives = 57/90 (63%)
Frame = +2
Query: 506 IFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 685
+FVG LS D++L Q F+ F ++A V+ D++TGRSRGFGFVSF + A AI EM
Sbjct: 37 LFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEM 96
Query: 686 NGKWLSSRQIRCNWATKGATSGEDKLSSDG 775
+GK L+ RQIR N AT+ +++ G
Sbjct: 97 DGKELNGRQIRVNLATERSSAPRSSFGGGG 126
>TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 130
Score = 72 bits (174), Expect = 1e-012
Identities = 38/82 (46%), Positives = 53/82 (64%)
Frame = +2
Query: 506 IFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 685
+F+G LS DA+L F+ F DA+V+ D++TGRSRGFGFV+F ++ A AI+EM
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96
Query: 686 NGKWLSSRQIRCNWATKGATSG 751
+GK L+ R IR N A + G
Sbjct: 97 DGKELNGRHIRVNPANDRPSGG 118
>TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR-RBP2
(GLYCINE-RICH RNA-BINDING PROTEIN 2); ATP binding / RNA binding /
double-stranded DNA binding / single-stranded DNA binding |
chr4:8021314-8022065 FORWARD
Length = 159
Score = 70 bits (171), Expect = 2e-012
Identities = 36/73 (49%), Positives = 50/73 (68%)
Frame = +2
Query: 506 IFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 685
+F+G LS DA+L F+ F DA+V+ D++TGRSRGFGFV+F ++ A AI+EM
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96
Query: 686 NGKWLSSRQIRCN 724
+GK L+ R IR N
Sbjct: 97 DGKELNGRHIRVN 109
>TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 154
Score = 70 bits (171), Expect = 2e-012
Identities = 36/73 (49%), Positives = 50/73 (68%)
Frame = +2
Query: 506 IFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 685
+F+G LS DA+L F+ F DA+V+ D++TGRSRGFGFV+F ++ A AI+EM
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96
Query: 686 NGKWLSSRQIRCN 724
+GK L+ R IR N
Sbjct: 97 DGKELNGRHIRVN 109
>TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 145
Score = 70 bits (171), Expect = 2e-012
Identities = 36/73 (49%), Positives = 50/73 (68%)
Frame = +2
Query: 506 IFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 685
+F+G LS DA+L F+ F DA+V+ D++TGRSRGFGFV+F ++ A AI+EM
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96
Query: 686 NGKWLSSRQIRCN 724
+GK L+ R IR N
Sbjct: 97 DGKELNGRHIRVN 109
>TAIR9_protein||AT5G04280.1 | Symbols: | glycine-rich RNA-binding protein |
chr5:1192461-1195413 FORWARD
Length = 311
Score = 70 bits (171), Expect = 2e-012
Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Frame = +2
Query: 506 IFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 685
IFVG LSPEVTD L + FS F D ++M ++ TGRSRGFGF++F +++ +I EM
Sbjct: 9 IFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRAMDESIREM 68
Query: 686 NGKWLSSRQIRCNWATK--GATSGEDKLSSDGK 778
+G+ R I N A G GE S G+
Sbjct: 69 HGRDFGDRVISVNRAEPKLGRDDGESHGSRGGR 101
>TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 70 bits (170), Expect = 3e-012
Identities = 38/107 (35%), Positives = 61/107 (57%)
Frame = +2
Query: 434 FGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKT 613
+G + ++ +G + S ++VG+LS V D AL +F+ +ARV++D+ +
Sbjct: 235 YGGSQRSSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDS 294
Query: 614 GRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGE 754
GRS+GFGFV+ + Q+ Q AIN +NG L RQIR + A G+
Sbjct: 295 GRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPRGQ 341
>TAIR9_protein||AT3G04500.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:1212065-1213795 REVERSE
Length = 246
Score = 70 bits (170), Expect = 3e-012
Identities = 32/73 (43%), Positives = 50/73 (68%)
Frame = +2
Query: 500 FNIFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIN 679
+ +F GDL EV D L + F+ F T + A+V+ D++TG+++G+GFVSF N D A+
Sbjct: 137 YRLFCGDLGNEVNDDVLSKAFARFPTFNMAKVIRDKRTGKTKGYGFVSFLNPADLAAALK 196
Query: 680 EMNGKWLSSRQIR 718
EMNGK++ +R I+
Sbjct: 197 EMNGKYVGNRPIK 209
>TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 70 bits (170), Expect = 3e-012
Identities = 38/107 (35%), Positives = 61/107 (57%)
Frame = +2
Query: 434 FGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKT 613
+G + ++ +G + S ++VG+LS V D AL +F+ +ARV++D+ +
Sbjct: 235 YGGSQRSSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDS 294
Query: 614 GRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGE 754
GRS+GFGFV+ + Q+ Q AIN +NG L RQIR + A G+
Sbjct: 295 GRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPRGQ 341
>TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr2:15634980-15636331
REVERSE
Length = 290
Score = 67 bits (162), Expect = 3e-011
Identities = 36/89 (40%), Positives = 53/89 (59%)
Frame = +2
Query: 464 YATGQREDTSSHFNIFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVS 643
Y G S ++VG+LS V D AL +FS +ARV++D+ +GRS+GFGFV+
Sbjct: 192 YGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVT 251
Query: 644 FRNQQDAQTAINEMNGKWLSSRQIRCNWA 730
+ + Q+ Q AI ++G L RQIR + A
Sbjct: 252 YDSSQEVQNAIKSLDGADLDGRQIRVSEA 280
>TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | GR-RBP8;
RNA binding / nucleic acid binding / nucleotide binding |
chr4:18274166-18274958 REVERSE
Length = 170
Score = 67 bits (161), Expect = 3e-011
Identities = 34/84 (40%), Positives = 51/84 (60%)
Frame = +2
Query: 500 FNIFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIN 679
+ FVG L+ D L + FS F D++++ D+++GRSRGFGFV+F++++ + AI
Sbjct: 6 YRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIE 65
Query: 680 EMNGKWLSSRQIRCNWATKGATSG 751
EMNGK L R I N A + G
Sbjct: 66 EMNGKELDGRVITVNEAQSRGSGG 89
>TAIR9_protein||AT4G39260.2 | Symbols: CCR1, ATGRP8, GRP8 | GR-RBP8; RNA binding
/ nucleic acid binding / nucleotide binding | chr4:18274166-18274958
REVERSE
Length = 127
Score = 67 bits (161), Expect = 3e-011
Identities = 34/84 (40%), Positives = 51/84 (60%)
Frame = +2
Query: 500 FNIFVGDLSPEVTDAALYQIFSVFSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIN 679
+ FVG L+ D L + FS F D++++ D+++GRSRGFGFV+F++++ + AI
Sbjct: 6 YRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIE 65
Query: 680 EMNGKWLSSRQIRCNWATKGATSG 751
EMNGK L R I N A + G
Sbjct: 66 EMNGKELDGRVITVNEAQSRGSGG 89
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,396,250,766
Number of Sequences: 33410
Number of Extensions: 9396250766
Number of Successful Extensions: 317353041
Number of sequences better than 0.0: 0
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