BLASTX 7.6.2
Query= UN18128 /QuerySize=612
(611 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G36240.1 | Symbols: | 60S ribosomal protein L... 223 6e-059
TAIR9_protein||AT1G77940.1 | Symbols: | 60S ribosomal protein L... 220 9e-058
TAIR9_protein||AT3G18740.1 | Symbols: | 60S ribosomal protein L... 218 2e-057
>TAIR9_protein||AT1G36240.1 | Symbols: | 60S ribosomal protein L30 (RPL30A) |
chr1:13614890-13616233 FORWARD
Length = 113
Score = 223 bits (568), Expect = 6e-059
Identities = 111/113 (98%)
Frame = +1
Query: 76 MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 255
MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI
Sbjct: 1 MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60
Query: 256 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGDQ* 414
EYYAMLAKVGVHHYN NNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGDQ*
Sbjct: 61 EYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGDQ* 113
>TAIR9_protein||AT1G77940.1 | Symbols: | 60S ribosomal protein L30 (RPL30B) |
chr1:29304116-29305288 REVERSE
Length = 113
Score = 220 bits (558), Expect = 9e-058
Identities = 107/113 (94%), Positives = 109/113 (96%)
Frame = +1
Query: 76 MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 255
MV KKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLR SKGKLILIS+NCPPLRRSEI
Sbjct: 1 MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60
Query: 256 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGDQ* 414
EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKS+PGDQ*
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIPGDQ* 113
>TAIR9_protein||AT3G18740.1 | Symbols: | 60S ribosomal protein L30 (RPL30C) |
chr3:6453437-6453870 FORWARD
Length = 113
Score = 218 bits (555), Expect = 2e-057
Identities = 108/113 (95%), Positives = 109/113 (96%)
Frame = +1
Query: 76 MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 255
MVA KK KKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI
Sbjct: 1 MVAEKKAKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60
Query: 256 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGDQ* 414
EYYAMLAKVGVH YNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIK+LPGDQ*
Sbjct: 61 EYYAMLAKVGVHRYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKTLPGDQ* 113
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,487,588,902
Number of Sequences: 33410
Number of Extensions: 9487588902
Number of Successful Extensions: 322657930
Number of sequences better than 0.0: 0
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