Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN18128


BLASTX 7.6.2

Query= UN18128 /QuerySize=612
        (611 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT1G36240.1 | Symbols:  | 60S ribosomal protein L...    223   6e-059
TAIR9_protein||AT1G77940.1 | Symbols:  | 60S ribosomal protein L...    220   9e-058
TAIR9_protein||AT3G18740.1 | Symbols:  | 60S ribosomal protein L...    218   2e-057

>TAIR9_protein||AT1G36240.1 | Symbols:  | 60S ribosomal protein L30 (RPL30A) |
        chr1:13614890-13616233 FORWARD

          Length = 113

 Score =  223 bits (568), Expect = 6e-059
 Identities = 111/113 (98%)
 Frame = +1

Query:  76 MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 255
           MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI
Sbjct:   1 MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 256 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGDQ* 414
           EYYAMLAKVGVHHYN NNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGDQ*
Sbjct:  61 EYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGDQ* 113

>TAIR9_protein||AT1G77940.1 | Symbols:  | 60S ribosomal protein L30 (RPL30B) |
        chr1:29304116-29305288 REVERSE

          Length = 113

 Score =  220 bits (558), Expect = 9e-058
 Identities = 107/113 (94%), Positives = 109/113 (96%)
 Frame = +1

Query:  76 MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 255
           MV  KKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLR SKGKLILIS+NCPPLRRSEI
Sbjct:   1 MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60

Query: 256 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGDQ* 414
           EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKS+PGDQ*
Sbjct:  61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIPGDQ* 113

>TAIR9_protein||AT3G18740.1 | Symbols:  | 60S ribosomal protein L30 (RPL30C) |
        chr3:6453437-6453870 FORWARD

          Length = 113

 Score =  218 bits (555), Expect = 2e-057
 Identities = 108/113 (95%), Positives = 109/113 (96%)
 Frame = +1

Query:  76 MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 255
           MVA KK KKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI
Sbjct:   1 MVAEKKAKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 256 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGDQ* 414
           EYYAMLAKVGVH YNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIK+LPGDQ*
Sbjct:  61 EYYAMLAKVGVHRYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKTLPGDQ* 113

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,487,588,902
Number of Sequences: 33410
Number of Extensions: 9487588902
Number of Successful Extensions: 322657930
Number of sequences better than 0.0: 0