Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN18175


BLASTX 7.6.2

Query= UN18175 /QuerySize=995
        (994 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G05250.1 | Symbols:  | zinc finger (C3HC4-type...    415   2e-116
TAIR9_protein||AT2G39100.1 | Symbols:  | zinc finger (C3HC4-type...     57   1e-008

>TAIR9_protein||AT3G05250.1 | Symbols:  | zinc finger (C3HC4-type RING finger)
        family protein | chr3:1495635-1497387 FORWARD

          Length = 279

 Score =  415 bits (1066), Expect = 2e-116
 Identities = 209/278 (75%), Positives = 236/278 (84%), Gaps = 9/278 (3%)
 Frame = -1

Query: 955 MAAKEIDVGSSSIDGG---DPCPICLGPILQESYLDTCFHKFCFRCIKQWIKVVSSKVTK 785
           MAAKEI  GS SID G   DPCPICLG  L+ESYLDTCFHKFCF CIKQWIKVVSSK +K
Sbjct:   1 MAAKEIAGGSGSIDDGSDFDPCPICLGQFLRESYLDTCFHKFCFNCIKQWIKVVSSKASK 60

Query: 784 PLSSVKCPLCKRDNISIIYNFDGHSFDRHYVDPNITDGFVLTKEQRCRLQCYYTESGFLA 605
             SSV CPLCK +N+SII+N+DG SF+RHY+DPNI DGFVLTKEQR RLQCYYTESGFLA
Sbjct:  61 QRSSVTCPLCKTENLSIIHNYDGCSFERHYIDPNIPDGFVLTKEQRYRLQCYYTESGFLA 120

Query: 604 DVFDVPKFWKLKKFLQRNRWLESWLRRELQALMQEEDVDIVLHHLVGVMDSFCKRTEQRH 425
           DVFDV +FWKL+KFLQ NR LE+WLRRELQALMQEEDVDIVLHHLVGVM+SFCKR +QR 
Sbjct: 121 DVFDVARFWKLQKFLQPNRCLEAWLRRELQALMQEEDVDIVLHHLVGVMESFCKRIKQRR 180

Query: 424 KQETRSGEAF-REQFKSVIAEAARPFLLARTDRFVHELELFLASGLNMEAYDAVYKQRLD 248
           KQETRS E   +EQFK+V++EAARPF++ARTDRFV ELELFLA+GLN+EAYDA+YKQ L+
Sbjct: 181 KQETRSAETTNQEQFKAVVSEAARPFVMARTDRFVDELELFLAAGLNLEAYDAIYKQGLE 240

Query: 247 KNNLREIGVANE--AGVEEEN---RGTPNLFLFEEDTE 149
            NN REIG A+E    VEE N   R TP LF+FEED++
Sbjct: 241 GNNRREIGAASEEREEVEEHNVRTRVTPYLFIFEEDSD 278

>TAIR9_protein||AT2G39100.1 | Symbols:  | zinc finger (C3HC4-type RING finger)
        family protein | chr2:16317462-16318869 FORWARD

          Length = 297

 Score =  57 bits (137), Expect = 1e-008
 Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
 Frame = -1

Query: 544 LESWLRRELQALMQEEDVDIVLHHLVGVMDSFCKRTEQRHKQET-RSGEAFREQFKSVIA 368
           +E W+RRELQA++ + D  +++H    +   F KR E+ + ++T ++G    ++  S+  
Sbjct: 204 IEPWIRRELQAVLGDPDPSVIVHFASAL---FIKRLERENNRQTGQTGMLVEDEVSSL-- 258

Query: 367 EAARPFLLARTDRFVHELELFLASGLNMEAYDAV 266
              R FL  + D F HEL  F  S L ME YDAV
Sbjct: 259 ---RKFLSDKVDIFWHELRCFAESILTMETYDAV 289

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,487,588,902
Number of Sequences: 33410
Number of Extensions: 9487588902
Number of Successful Extensions: 322657930
Number of sequences better than 0.0: 0