Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN18188


BLASTX 7.6.2

Query= UN18188 /QuerySize=703
        (702 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G63670.1 | Symbols: SPT42 | SPT42 (SPT4 HOMOLO...    243   1e-064
TAIR9_protein||AT5G08565.1 | Symbols:  | positive transcription ...    226   1e-059

>TAIR9_protein||AT5G63670.1 | Symbols: SPT42 | SPT42 (SPT4 HOMOLOG 2); positive
        transcription elongation factor/ zinc ion binding |
        chr5:25488012-25489247 FORWARD

          Length = 117

 Score =  243 bits (618), Expect = 1e-064
 Identities = 113/117 (96%), Positives = 114/117 (97%)
 Frame = +3

Query:  69 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRDAGCENCPFFKMEEDHERIVEVTTPNFN 248
           MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRDAGCENCPFFKMEEDHERIVEVTTPNFN
Sbjct:   1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRDAGCENCPFFKMEEDHERIVEVTTPNFN 60

Query: 249 GIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVPPKRM* 419
           GIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPL EEMQH+CQEERVQYV PKRM*
Sbjct:  61 GIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPLPEEMQHLCQEERVQYVLPKRM* 117

>TAIR9_protein||AT5G08565.1 | Symbols:  | positive transcription elongation
        factor/ zinc ion binding | chr5:2775964-2777154 FORWARD

          Length = 117

 Score =  226 bits (575), Expect = 1e-059
 Identities = 103/117 (88%), Positives = 110/117 (94%)
 Frame = +3

Query:  69 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRDAGCENCPFFKMEEDHERIVEVTTPNFN 248
           MG APAQIPTSFGHELRACLRCRLVKTYDQFRD+GCENCPFFK+E+DHERIV+VTTPNFN
Sbjct:   1 MGEAPAQIPTSFGHELRACLRCRLVKTYDQFRDSGCENCPFFKIEDDHERIVDVTTPNFN 60

Query: 249 GIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVPPKRM* 419
           GIIS+MDP RSWAARWLRIGKFAPGCYTLAVSE L EEMQ ICQ+ RVQYVPPKR+*
Sbjct:  61 GIISMMDPRRSWAARWLRIGKFAPGCYTLAVSEALPEEMQFICQQARVQYVPPKRI* 117

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,487,588,902
Number of Sequences: 33410
Number of Extensions: 9487588902
Number of Successful Extensions: 322657930
Number of sequences better than 0.0: 0