Library    |     Search    |     Batch query    |     SNP    |     SSR  

SwissProt blast output of UN18189


BLASTX 7.6.2

Query= UN18189 /QuerySize=997
        (996 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q94FT2|SKIP5_ARATH F-box protein SKIP5 OS=Arabidopsis thalian...    461   3e-129

>sp|Q94FT2|SKIP5_ARATH F-box protein SKIP5 OS=Arabidopsis thaliana GN=SKIP5 PE=1
        SV=1

          Length = 274

 Score =  461 bits (1186), Expect = 3e-129
 Identities = 233/276 (84%), Positives = 251/276 (90%), Gaps = 7/276 (2%)
 Frame = -3

Query: 955 METPKISKLDDK----RITEPRMKKKKRMKHEFLTSLNNLDDGCLMHILSFLSPIPDRYN 788
           ME  +ISKLD+K    RI E +M  KKRMK   LTSLNNLDDGCLMHILSFLSPIPDRYN
Sbjct:   1 MELHEISKLDNKKHPERIVESKM--KKRMKPYSLTSLNNLDDGCLMHILSFLSPIPDRYN 58

Query: 787 TALVCHRWRYLACHPRLWLRVDPFVKGLSLPGVFHDIESAVSAARPGDTILIGAGGSHRV 608
           TALVCHRWRYLACHPRLWLRVD FVK LS PGVF +IESAVSAARPGDTILI AGG++RV
Sbjct:  59 TALVCHRWRYLACHPRLWLRVDRFVKDLSQPGVFLNIESAVSAARPGDTILIVAGGNYRV 118

Query: 607 SNIQIKKPICLIGGGEIPDETTLVCSRGSDSALELLSTCKLANLTVKAELGCCLLHRSGR 428
           SNIQIKKP+CL+GGGEIPDETTLVC+RGSDSALELLSTCKLANLTVKAELGCCLLHRSGR
Sbjct: 119 SNIQIKKPLCLVGGGEIPDETTLVCARGSDSALELLSTCKLANLTVKAELGCCLLHRSGR 178

Query: 427 ITIDGCVLQCETNPLDHLSCPIVSTAGEEE-DNLSRHVEVKETVVEKIKGNSVTVLQTRI 251
           +TIDGCVLQCETNPLDHLSCPIVSTAG+E+ +N+  HVEVKETV  KIK NSVTVLQTRI
Sbjct: 179 LTIDGCVLQCETNPLDHLSCPIVSTAGDEDIENILSHVEVKETVTGKIKANSVTVLQTRI 238

Query: 250 EGGAKAVATSGDLVLQRVRVMYSKAYLYFWFDINHE 143
           EGGAKAV+T GDLVLQRVRVMYSKAYLYFWFD+++E
Sbjct: 239 EGGAKAVSTRGDLVLQRVRVMYSKAYLYFWFDVDYE 274

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,436,365,428
Number of Sequences: 518415
Number of Extensions: 75436365428
Number of Successful Extensions: 513409628
Number of sequences better than 0.0: 0