BLASTX 7.6.2
Query= UN18288 /QuerySize=817
(816 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9SKT0|THF1_ARATH Protein THYLAKOID FORMATION 1, chloroplasti... 284 5e-076
sp|Q7XAB8|THF1_SOLTU Protein THYLAKOID FORMATION1, chloroplastic... 220 9e-057
sp|Q84PB7|THF1_ORYSJ Protein THYLAKOID FORMATION1, chloroplastic... 209 3e-053
sp|B0C3M8|THF1_ACAM1 Protein thf1 OS=Acaryochloris marina (strai... 103 2e-021
sp|Q116P5|THF1_TRIEI Protein thf1 OS=Trichodesmium erythraeum (s... 101 6e-021
sp|B7KI38|THF1_CYAP7 Protein thf1 OS=Cyanothece sp. (strain PCC ... 98 5e-020
sp|B8HQ62|THF1_CYAP4 Protein thf1 OS=Cyanothece sp. (strain PCC ... 95 4e-019
sp|B1XHY6|THF1_SYNP2 Protein thf1 OS=Synechococcus sp. (strain A... 93 2e-018
sp|Q31MY4|THF1_SYNE7 Protein thf1 OS=Synechococcus elongatus (st... 90 1e-017
sp|Q5N664|THF1_SYNP6 Protein thf1 OS=Synechococcus sp. (strain A... 90 1e-017
sp|Q8DJT8|THF1_THEEB Protein thf1 OS=Thermosynechococcus elongat... 90 1e-017
sp|B7K277|THF1_CYAP8 Protein thf1 OS=Cyanothece sp. (strain PCC ... 88 7e-017
sp|P0C1D1|THF1_SYNJB Protein thf1 OS=Synechococcus sp. GN=thf1 P... 84 8e-016
sp|Q2JSQ3|THF1_SYNJA Protein thf1 OS=Synechococcus sp. (strain J... 84 1e-015
sp|P73956|THF1_SYNY3 Protein thf1 OS=Synechocystis sp. (strain P... 81 9e-015
sp|A9BAB2|THF1_PROM4 Protein thf1 OS=Prochlorococcus marinus (st... 51 7e-006
>sp|Q9SKT0|THF1_ARATH Protein THYLAKOID FORMATION 1, chloroplastic
OS=Arabidopsis thaliana GN=THF1 PE=1 SV=1
Length = 300
Score = 284 bits (726), Expect = 5e-076
Identities = 159/226 (70%), Positives = 178/226 (78%), Gaps = 8/226 (3%)
Frame = +3
Query: 120 AAAIASLSFPALGQSAKISNSTTPSLPLASVSAISRRISRHSLTSSRASTSSSKLIIHCM 299
A AI+SLSFPALGQS KISN + S PLAS I + SR SL S S+SK +IHCM
Sbjct: 3 ATAISSLSFPALGQSDKISNFAS-SRPLASAIRICTKFSRLSLN----SRSTSKSLIHCM 57
Query: 300 SSVT-DVPPVSETKSNFLKAYKRPIPSIYNTVLRELIVQQHLMRYKKTYRYDPVFALGFV 476
S+VT DVPPVSETKS FLKAYKRPIPSIYNTVL+ELIVQQHLMRYKKTYRYDPVFALGFV
Sbjct: 58 SNVTADVPPVSETKSKFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFV 117
Query: 477 TVYDQLMDGYPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTSASLVDFSSKR 656
TVYDQLM+GYPSDQDRD+IF+AY++ALNEDP QYR DAQKMEEWARSQTSASLVDFSSK
Sbjct: 118 TVYDQLMEGYPSDQDRDAIFKAYIEALNEDPKQYRIDAQKMEEWARSQTSASLVDFSSKE 177
Query: 657 EKLKRFLRTFQKELAVR-GFSYSS-SSLLVCSLA*ACSATDPTVLD 788
++ L+ + GFSYS ++ + L SATDPTVLD
Sbjct: 178 GDIEAVLKDIAGRAGSKEGFSYSRFFAVGLFRLLELASATDPTVLD 223
>sp|Q7XAB8|THF1_SOLTU Protein THYLAKOID FORMATION1, chloroplastic OS=Solanum
tuberosum GN=THF1 PE=2 SV=1
Length = 293
Score = 220 bits (560), Expect = 9e-057
Identities = 117/227 (51%), Positives = 162/227 (71%), Gaps = 9/227 (3%)
Frame = +3
Query: 123 AAIASLSFPALGQSAKISNSTTPSLPLASVSAISRRISRHSLTS--SRASTSSSKLIIHC 296
AA+ S+SF A+ QSA+ +S + S + + R S S S R+S S+S+ ++HC
Sbjct: 2 AAVTSVSFSAITQSAERKSSVSSSRSIDTF----RFRSNFSFDSVNVRSSNSTSRFVVHC 57
Query: 297 -MSSVTDVPPVSETKSNFLKAYKRPIPSIYNTVLRELIVQQHLMRYKKTYRYDPVFALGF 473
SS D+P V++TK FL AYKRPIP++YNTVL+ELIVQQHL RYKK+Y+YDPVFALGF
Sbjct: 58 TSSSAADLPTVADTKLKFLTAYKRPIPTVYNTVLQELIVQQHLTRYKKSYQYDPVFALGF 117
Query: 474 VTVYDQLMDGYPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTSASLVDFSSK 653
VTVYDQLM+GYPS++DR++IF+AY++AL EDP QYR DAQK+EEWAR+Q + +LVDFSSK
Sbjct: 118 VTVYDQLMEGYPSEEDRNAIFKAYIEALKEDPEQYRADAQKLEEWARTQNANTLVDFSSK 177
Query: 654 REKLKRFLRTFQKELAVR-GFSYSS-SSLLVCSLA*ACSATDPTVLD 788
+++ + + + GF YS ++ + L + TDPT+L+
Sbjct: 178 EGEIENIFKDIAQRAGTKDGFCYSRLFAVGLFRLLELANVTDPTILE 224
>sp|Q84PB7|THF1_ORYSJ Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza
sativa subsp. japonica GN=THF1 PE=2 SV=1
Length = 287
Score = 209 bits (530), Expect = 3e-053
Identities = 115/218 (52%), Positives = 150/218 (68%), Gaps = 12/218 (5%)
Frame = +3
Query: 144 FPALGQSAKISNSTTPSLPLASVSAISRRISRHSLTSSRASTSSSKLIIHCMSSVTDVPP 323
F AL ++A ST + A A+ S S+ ++ C+++ DVPP
Sbjct: 9 FAALRRAADCRPSTAAAAAGAGAGAV---------VLSVRPRRGSRSVVRCVATAGDVPP 59
Query: 324 -VSETKSNFLKAYKRPIPSIYNTVLRELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMD 500
V+ETK NFLK+YKRPI SIY+TVL+EL+VQQHLMRYK TY+YD VFALGFVTVYDQLM+
Sbjct: 60 TVAETKMNFLKSYKRPILSIYSTVLQELLVQQHLMRYKTTYQYDAVFALGFVTVYDQLME 119
Query: 501 GYPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTSASLVDFSSKREKLKRFLR 680
GYPS++DRD+IF+AY+ ALNEDP QYR DAQKMEEWARSQ SLV+FSSK +++ L+
Sbjct: 120 GYPSNEDRDAIFKAYITALNEDPEQYRADAQKMEEWARSQNGNSLVEFSSKDGEIEAILK 179
Query: 681 TFQKELAVRG-FSYSS-SSLLVCSLA*ACSATDPTVLD 788
+ +G FSYS ++ + L +AT+PT+LD
Sbjct: 180 DISERAQGKGSFSYSRFFAVGLFRLLELANATEPTILD 217
>sp|B0C3M8|THF1_ACAM1 Protein thf1 OS=Acaryochloris marina (strain MBIC 11017)
GN=thf1 PE=3 SV=1
Length = 247
Score = 103 bits (256), Expect = 2e-021
Identities = 45/107 (42%), Positives = 72/107 (67%)
Frame = +3
Query: 324 VSETKSNFLKAYKRPIPSIYNTVLRELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMDG 503
VS+TK F + RP+ S+Y V+ EL+V+ HL+R + +RYDP+FALG T +D+ MDG
Sbjct: 7 VSDTKRAFYSIHTRPVNSVYRRVVEELMVEMHLLRVNEDFRYDPIFALGVTTSFDRFMDG 66
Query: 504 YPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTSASLVDF 644
Y + D+D+IF A +A DP Q + D Q++ E A+S+++ ++D+
Sbjct: 67 YQPENDKDAIFSAICKAQEADPVQMKKDGQRLTELAQSKSAQEMLDW 113
>sp|Q116P5|THF1_TRIEI Protein thf1 OS=Trichodesmium erythraeum (strain IMS101)
GN=thf1 PE=3 SV=1
Length = 239
Score = 101 bits (251), Expect = 6e-021
Identities = 46/107 (42%), Positives = 70/107 (65%)
Frame = +3
Query: 324 VSETKSNFLKAYKRPIPSIYNTVLRELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMDG 503
VS+TK F + RPI SIYN V+ EL+V+ HL+ Y Y+P +ALG VT +D+ M G
Sbjct: 7 VSDTKKTFYHFHTRPINSIYNRVIEELLVEMHLISVNVDYSYNPFYALGVVTAFDRFMQG 66
Query: 504 YPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTSASLVDF 644
Y +D+ SIF A +Q EDPN+YR+DA+ +E+ A +++ ++ +
Sbjct: 67 YSPQEDKTSIFNALIQGQEEDPNKYRSDAKGLEDLAGKISASDILSW 113
>sp|B7KI38|THF1_CYAP7 Protein thf1 OS=Cyanothece sp. (strain PCC 7424) GN=thf1
PE=3 SV=1
Length = 226
Score = 98 bits (243), Expect = 5e-020
Identities = 46/108 (42%), Positives = 70/108 (64%)
Frame = +3
Query: 315 VPPVSETKSNFLKAYKRPIPSIYNTVLRELIVQQHLMRYKKTYRYDPVFALGFVTVYDQL 494
V VS++K +F + RPI S+Y V+ EL+V+ HL+ ++YDPV+ALG VT + +
Sbjct: 4 VRTVSDSKRDFYTKHTRPINSVYRRVVEELMVEMHLLSVNSDFQYDPVYALGVVTSFQRF 63
Query: 495 MDGYPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTSASLV 638
M GY D D++SIF A Q++ DP QYR DA++M E A+ ++ L+
Sbjct: 64 MQGYRPDADKESIFNALCQSVGGDPQQYRQDAERMIESAKQLSAQQLL 111
>sp|B8HQ62|THF1_CYAP4 Protein thf1 OS=Cyanothece sp. (strain PCC 7425 / ATCC
29141) GN=thf1 PE=3 SV=1
Length = 236
Score = 95 bits (235), Expect = 4e-019
Identities = 51/114 (44%), Positives = 69/114 (60%)
Frame = +3
Query: 324 VSETKSNFLKAYKRPIPSIYNTVLRELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMDG 503
VS+TK F + RPI SIY V+ EL+V+ HL+R +T+ YDPVFALG VT +++ M G
Sbjct: 7 VSDTKRAFYHNHARPINSIYRRVVEELLVEIHLLRVNQTFVYDPVFALGVVTTFERFMQG 66
Query: 504 YPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTSASLVDFSSKREKL 665
Y D+ SIF A A DP Q + DAQ++ R Q+ SL+D+ S L
Sbjct: 67 YHPPADQTSIFNAICLAQELDPQQVQQDAQELLGRVRGQSLESLLDWISTAASL 120
>sp|B1XHY6|THF1_SYNP2 Protein thf1 OS=Synechococcus sp. (strain ATCC 27264 / PCC
7002 / PR-6) GN=thf1 PE=3 SV=1
Length = 254
Score = 93 bits (230), Expect = 2e-018
Identities = 44/112 (39%), Positives = 70/112 (62%)
Frame = +3
Query: 306 VTDVPPVSETKSNFLKAYKRPIPSIYNTVLRELIVQQHLMRYKKTYRYDPVFALGFVTVY 485
++ V VS+TK +F + RPI SI+ V+ EL+V+ HL+ +RYDP +ALG VT +
Sbjct: 1 MSQVRTVSDTKRDFYTHHTRPINSIFRRVVEELLVEMHLLSVNADFRYDPFYALGVVTSF 60
Query: 486 DQLMDGYPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTSASLVD 641
++ M GY + D+ SIFQ+ QA+ D N+Y+ DA + E A+ + L++
Sbjct: 61 ERFMQGYRPEADKVSIFQSMCQAIGGDANRYKEDAMALVELAKRCSGTQLIE 112
>sp|Q31MY4|THF1_SYNE7 Protein thf1 OS=Synechococcus elongatus (strain PCC 7942)
GN=thf1 PE=3 SV=2
Length = 254
Score = 90 bits (222), Expect = 1e-017
Identities = 46/120 (38%), Positives = 69/120 (57%)
Frame = +3
Query: 306 VTDVPPVSETKSNFLKAYKRPIPSIYNTVLRELIVQQHLMRYKKTYRYDPVFALGFVTVY 485
+T VP VS++K F AY RPI +Y V+ EL+V+ HL+ ++ YDP+FALG VT +
Sbjct: 1 MTSVPTVSDSKRAFYAAYPRPINPLYRRVVEELLVEIHLLSVNTSFVYDPLFALGVVTAF 60
Query: 486 DQLMDGYPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTSASLVDFSSKREKL 665
D M Y + +F A QA+ ++P QYR DA + E R S ++ + ++ E L
Sbjct: 61 DSFMSSYRPIEAVGPLFTALTQAVRQNPEQYRHDANAIAEQVRGVGSDTIRQWLTEAEAL 120
>sp|Q5N664|THF1_SYNP6 Protein thf1 OS=Synechococcus sp. (strain ATCC 27144 / PCC
6301 / SAUG 1402/1) GN=thf1 PE=3 SV=2
Length = 254
Score = 90 bits (222), Expect = 1e-017
Identities = 46/120 (38%), Positives = 69/120 (57%)
Frame = +3
Query: 306 VTDVPPVSETKSNFLKAYKRPIPSIYNTVLRELIVQQHLMRYKKTYRYDPVFALGFVTVY 485
+T VP VS++K F AY RPI +Y V+ EL+V+ HL+ ++ YDP+FALG VT +
Sbjct: 1 MTSVPTVSDSKRAFYAAYPRPINPLYRRVVEELLVEIHLLSVNTSFVYDPLFALGVVTAF 60
Query: 486 DQLMDGYPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTSASLVDFSSKREKL 665
D M Y + +F A QA+ ++P QYR DA + E R S ++ + ++ E L
Sbjct: 61 DSFMSSYRPIEAVGPLFTALTQAVRQNPEQYRHDANAIAEQVRGVGSDTIRQWLTEAEAL 120
>sp|Q8DJT8|THF1_THEEB Protein thf1 OS=Thermosynechococcus elongatus (strain
BP-1) GN=thf1 PE=3 SV=1
Length = 222
Score = 90 bits (222), Expect = 1e-017
Identities = 46/109 (42%), Positives = 64/109 (58%)
Frame = +3
Query: 324 VSETKSNFLKAYKRPIPSIYNTVLRELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMDG 503
VS+TK F A+ RPI SIY + EL+V+ HL+R +RY P+FALG VT +DQ M+G
Sbjct: 7 VSDTKRAFYAAHTRPIHSIYRRFIEELLVEIHLLRVNVDFRYSPLFALGVVTAFDQFMEG 66
Query: 504 YPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTSASLVDFSS 650
Y + DRD IF A A +P Q + DA +++ S L + +S
Sbjct: 67 YQPEGDRDRIFHALCVAEEMNPQQLKEDAASWQQYQGRPLSQILDELNS 115
>sp|B7K277|THF1_CYAP8 Protein thf1 OS=Cyanothece sp. (strain PCC 8801) GN=thf1
PE=3 SV=1
Length = 235
Score = 88 bits (216), Expect = 7e-017
Identities = 41/105 (39%), Positives = 64/105 (60%)
Frame = +3
Query: 324 VSETKSNFLKAYKRPIPSIYNTVLRELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMDG 503
VS+TK +F + RPI SIY + EL+V+ HL+ +RYDP++ALG V + Q M G
Sbjct: 7 VSDTKRDFYNHHTRPINSIYRRFIEELLVEMHLLCVNIDFRYDPIYALGVVASFQQFMQG 66
Query: 504 YPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARSQTSASLV 638
Y ++D++SIF A QA+ D +YR +AQ + + + + L+
Sbjct: 67 YRPEEDKNSIFSALCQAVGGDGEKYRHEAQTLLNQVKGMSVSDLI 111
>sp|P0C1D1|THF1_SYNJB Protein thf1 OS=Synechococcus sp. GN=thf1 PE=3 SV=1
Length = 239
Score = 84 bits (207), Expect = 8e-016
Identities = 42/97 (43%), Positives = 60/97 (61%)
Frame = +3
Query: 315 VPPVSETKSNFLKAYKRPIPSIYNTVLRELIVQQHLMRYKKTYRYDPVFALGFVTVYDQL 494
V +S TK+ F AY RPI ++Y V+ EL+V+ HL T+ YDP FALG VT+YD L
Sbjct: 4 VRTLSATKAAFFSAYPRPINAVYRRVVEELLVELHLTTVNSTFVYDPFFALGLVTLYDGL 63
Query: 495 MDGYPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEE 605
M+ Y + R++IF A +AL+ P R +A+ + E
Sbjct: 64 MEAYHPPEQREAIFNALCKALHLKPEVLRKNARDLLE 100
>sp|Q2JSQ3|THF1_SYNJA Protein thf1 OS=Synechococcus sp. (strain JA-3-3Ab)
GN=thf1 PE=3 SV=1
Length = 239
Score = 84 bits (206), Expect = 1e-015
Identities = 43/101 (42%), Positives = 60/101 (59%)
Frame = +3
Query: 315 VPPVSETKSNFLKAYKRPIPSIYNTVLRELIVQQHLMRYKKTYRYDPVFALGFVTVYDQL 494
V +S TK+ F AY RPI + Y V+ EL+V+ HL + YDP FALG VT+YD L
Sbjct: 4 VRTLSATKAAFFSAYPRPINAAYRRVVEELLVELHLTTVNSAFVYDPFFALGLVTLYDSL 63
Query: 495 MDGYPSDQDRDSIFQAYVQALNEDPNQYRTDAQKMEEWARS 617
M+ Y + R++IF A +AL+ P R +A+ + E RS
Sbjct: 64 MEAYHPPEQREAIFNALCKALHLKPEVLRKNARDLLELMRS 104
>sp|P73956|THF1_SYNY3 Protein thf1 OS=Synechocystis sp. (strain PCC 6803)
GN=thf1 PE=3 SV=1
Length = 240
Score = 81 bits (198), Expect = 9e-015
Identities = 37/98 (37%), Positives = 57/98 (58%)
Frame = +3
Query: 306 VTDVPPVSETKSNFLKAYKRPIPSIYNTVLRELIVQQHLMRYKKTYRYDPVFALGFVTVY 485
+T + VS+ K F Y RPI SIY + EL+V+ HL+ + YDP+FALG VT +
Sbjct: 1 MTKIRTVSDAKRKFFTHYSRPISSIYRRFVEELLVEMHLLSVNIDFTYDPIFALGIVTSF 60
Query: 486 DQLMDGYPSDQDRDSIFQAYVQALNEDPNQYRTDAQKM 599
+ M GY + +IF A ++++P+Q R DA+ +
Sbjct: 61 NSFMQGYQPAEQLPAIFNALCHGVDQNPDQVRQDAKNV 98
>sp|A9BAB2|THF1_PROM4 Protein thf1 OS=Prochlorococcus marinus (strain MIT 9211)
GN=thf1 PE=3 SV=1
Length = 221
Score = 51 bits (121), Expect = 7e-006
Identities = 28/116 (24%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Frame = +3
Query: 324 VSETKSNFLKAYKRPIPSIYNTVLRELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMDG 503
VSE+K+ F K + +P++Y ++ ELIV+ +L++ ++ + D VFA+G +++ G
Sbjct: 7 VSESKAIFHKEFPFVVPAVYRRLVDELIVELNLLKNQERFVADGVFAIGLTSIFLDFTKG 66
Query: 504 YPSDQDRDSIFQAYVQALN---EDPNQYRTDAQKMEEWARSQTSASLVDFSSKREK 662
Y + + + +A + + Q +A+K+ + SL+ +++ EK
Sbjct: 67 YKPENQKGILLEAICKCTGFSASNLEQIALEAKKLANGLNTNEIKSLITDNNRDEK 122
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,436,365,428
Number of Sequences: 518415
Number of Extensions: 75436365428
Number of Successful Extensions: 513409628
Number of sequences better than 0.0: 0
|
