BLASTX 7.6.2
Query= UN18354 /QuerySize=1408
(1407 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G16845.1 | Symbols: VRN2 | VRN2 (REDUCED VERNA... 377 1e-104
TAIR9_protein||AT4G16845.2 | Symbols: VRN2 | VRN2 (REDUCED VERNA... 377 1e-104
TAIR9_protein||AT5G51230.1 | Symbols: EMF2, VEF2, CYR1 | EMF2 (E... 232 4e-061
TAIR9_protein||AT5G51230.2 | Symbols: EMF2, VEF2, CYR1 | EMF2 (E... 232 4e-061
TAIR9_protein||AT5G51230.3 | Symbols: EMF2, VEF2, CYR1 | EMF2 (E... 232 4e-061
TAIR9_protein||AT2G35670.1 | Symbols: FIS2, FIE2 | FIS2 (FERTILI... 180 3e-045
TAIR9_protein||AT4G16810.1 | Symbols: | FUNCTIONS IN: molecular... 178 1e-044
>TAIR9_protein||AT4G16845.1 | Symbols: VRN2 | VRN2 (REDUCED VERNALIZATION
RESPONSE 2); transcription factor | chr4:9476708-9479725 FORWARD
Length = 441
Score = 377 bits (966), Expect = 1e-104
Identities = 192/274 (70%), Positives = 221/274 (80%), Gaps = 3/274 (1%)
Frame = -2
Query: 965 SKPRKRRQRGHRVNPSLLNVTFLPMDSPSLPNGTDNATPLLSNGNHSLGYPVATDVAGQF 786
SKPRKRRQRG R N L V FLP+DSPSL NGT+N LL++GN LGYP AT++AGQF
Sbjct: 155 SKPRKRRQRGGRNNTRRLKVCFLPLDSPSLANGTENGIALLNDGNRGLGYPEATELAGQF 214
Query: 785 GM--NNSPAIAQCSMNSNAKAVLTSEAVAHAAKTRKLSAERSEARSNLLLQKRQFYHSHR 612
M N PAIA S+++ AK +LT+EAV A KTRKLSAERSEARS+LLLQKRQFYHSHR
Sbjct: 215 EMTSNIPPAIAHSSLDAGAKVILTTEAVVPATKTRKLSAERSEARSHLLLQKRQFYHSHR 274
Query: 611 VQPMSLEQVMSDRDSEDEVDDDVADLEDRQMLDDFVDVNKNEKRFMHLWNSFVRKQRVVA 432
VQPM+LEQVMSDRDSEDEVDDDVAD EDRQMLDDFVDVNK+EK+FMHLWNSFVRKQRV+A
Sbjct: 275 VQPMALEQVMSDRDSEDEVDDDVADFEDRQMLDDFVDVNKDEKQFMHLWNSFVRKQRVIA 334
Query: 431 DGHIPWACEAFSKFHKEELLHSSPLCWCWRLFMIKLWNIGLVDSATINSCNVILENCDSN 252
DGHI WACE FS+F+++EL S L WCWRLF+IKLWN GLVDSATIN+CN ILENC +
Sbjct: 335 DGHISWACEVFSRFYEKELHCYSSLFWCWRLFLIKLWNHGLVDSATINNCNTILENCRNT 394
Query: 251 SDKNNNDKKSVDVGIDINSNAMDVDEDLNNSKAK 150
S NNN+ SVD D N+N ++ + N+ K K
Sbjct: 395 SVTNNNN-NSVDHPSDSNTNNNNIVDHPNDIKNK 427
Score = 88 bits (217), Expect = 1e-017
Identities = 46/56 (82%), Positives = 48/56 (85%), Gaps = 2/56 (3%)
Frame = -3
Query: 1132 MCRQNCCAKSSQEEEVISPPDENLLIYCKPVRLYNILRIRSLFNPSFLPRCLSYKI 965
MCRQNC AKSS EEVIS DENLLIYCKPVRLYNI +RSL NPSFLPRCL+YKI
Sbjct: 1 MCRQNCRAKSS-PEEVIS-TDENLLIYCKPVRLYNIFHLRSLGNPSFLPRCLNYKI 54
>TAIR9_protein||AT4G16845.2 | Symbols: VRN2 | VRN2 (REDUCED VERNALIZATION
RESPONSE 2); transcription factor | chr4:9477246-9479725 FORWARD
Length = 381
Score = 377 bits (966), Expect = 1e-104
Identities = 192/274 (70%), Positives = 221/274 (80%), Gaps = 3/274 (1%)
Frame = -2
Query: 965 SKPRKRRQRGHRVNPSLLNVTFLPMDSPSLPNGTDNATPLLSNGNHSLGYPVATDVAGQF 786
SKPRKRRQRG R N L V FLP+DSPSL NGT+N LL++GN LGYP AT++AGQF
Sbjct: 95 SKPRKRRQRGGRNNTRRLKVCFLPLDSPSLANGTENGIALLNDGNRGLGYPEATELAGQF 154
Query: 785 GM--NNSPAIAQCSMNSNAKAVLTSEAVAHAAKTRKLSAERSEARSNLLLQKRQFYHSHR 612
M N PAIA S+++ AK +LT+EAV A KTRKLSAERSEARS+LLLQKRQFYHSHR
Sbjct: 155 EMTSNIPPAIAHSSLDAGAKVILTTEAVVPATKTRKLSAERSEARSHLLLQKRQFYHSHR 214
Query: 611 VQPMSLEQVMSDRDSEDEVDDDVADLEDRQMLDDFVDVNKNEKRFMHLWNSFVRKQRVVA 432
VQPM+LEQVMSDRDSEDEVDDDVAD EDRQMLDDFVDVNK+EK+FMHLWNSFVRKQRV+A
Sbjct: 215 VQPMALEQVMSDRDSEDEVDDDVADFEDRQMLDDFVDVNKDEKQFMHLWNSFVRKQRVIA 274
Query: 431 DGHIPWACEAFSKFHKEELLHSSPLCWCWRLFMIKLWNIGLVDSATINSCNVILENCDSN 252
DGHI WACE FS+F+++EL S L WCWRLF+IKLWN GLVDSATIN+CN ILENC +
Sbjct: 275 DGHISWACEVFSRFYEKELHCYSSLFWCWRLFLIKLWNHGLVDSATINNCNTILENCRNT 334
Query: 251 SDKNNNDKKSVDVGIDINSNAMDVDEDLNNSKAK 150
S NNN+ SVD D N+N ++ + N+ K K
Sbjct: 335 SVTNNNN-NSVDHPSDSNTNNNNIVDHPNDIKNK 367
>TAIR9_protein||AT5G51230.1 | Symbols: EMF2, VEF2, CYR1 | EMF2 (EMBRYONIC FLOWER
2); DNA binding / transcription factor | chr5:20824153-20829344
FORWARD
Length = 632
Score = 232 bits (591), Expect = 4e-061
Identities = 107/169 (63%), Positives = 132/169 (78%)
Frame = -2
Query: 773 SPAIAQCSMNSNAKAVLTSEAVAHAAKTRKLSAERSEARSNLLLQKRQFYHSHRVQPMSL 594
SPA Q + + + + AKTRK+S ERS+ R+ LLQKRQF+HSHR QPM+L
Sbjct: 459 SPADVQSCGDPDYVQSIAGSTMLQFAKTRKISIERSDLRNRSLLQKRQFFHSHRAQPMAL 518
Query: 593 EQVMSDRDSEDEVDDDVADLEDRQMLDDFVDVNKNEKRFMHLWNSFVRKQRVVADGHIPW 414
EQV+SDRDSEDEVDDDVAD EDR+MLDDFVDV K+EK+ MH+WNSFVRKQRV+ADGHIPW
Sbjct: 519 EQVLSDRDSEDEVDDDVADFEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPW 578
Query: 413 ACEAFSKFHKEELLHSSPLCWCWRLFMIKLWNIGLVDSATINSCNVILE 267
ACEAFS+ H ++ + L WCWR+FM+KLWN GL+D+ T+N+CN LE
Sbjct: 579 ACEAFSRLHGPIMVRTPHLIWCWRVFMVKLWNHGLLDARTMNNCNTFLE 627
Score = 63 bits (152), Expect = 4e-010
Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Frame = -3
Query: 1147 RVRERMCRQNCCAKSSQEEEVISPPDENLLIYCKPVRLYNILRIRSLFNPSFLPRCLSYK 968
R E+MC ++ + S+EEE+ + +E+L YCKPV LYNI++ R++ NP FL RCL YK
Sbjct: 16 RSTEQMCHEDSRLRISEEEEIAA--EESLAAYCKPVELYNIIQRRAIRNPLFLQRCLHYK 73
Query: 967 I 965
I
Sbjct: 74 I 74
>TAIR9_protein||AT5G51230.2 | Symbols: EMF2, VEF2, CYR1 | EMF2 (EMBRYONIC FLOWER
2); DNA binding / transcription factor | chr5:20824153-20829344
FORWARD
Length = 627
Score = 232 bits (591), Expect = 4e-061
Identities = 107/169 (63%), Positives = 132/169 (78%)
Frame = -2
Query: 773 SPAIAQCSMNSNAKAVLTSEAVAHAAKTRKLSAERSEARSNLLLQKRQFYHSHRVQPMSL 594
SPA Q + + + + AKTRK+S ERS+ R+ LLQKRQF+HSHR QPM+L
Sbjct: 454 SPADVQSCGDPDYVQSIAGSTMLQFAKTRKISIERSDLRNRSLLQKRQFFHSHRAQPMAL 513
Query: 593 EQVMSDRDSEDEVDDDVADLEDRQMLDDFVDVNKNEKRFMHLWNSFVRKQRVVADGHIPW 414
EQV+SDRDSEDEVDDDVAD EDR+MLDDFVDV K+EK+ MH+WNSFVRKQRV+ADGHIPW
Sbjct: 514 EQVLSDRDSEDEVDDDVADFEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPW 573
Query: 413 ACEAFSKFHKEELLHSSPLCWCWRLFMIKLWNIGLVDSATINSCNVILE 267
ACEAFS+ H ++ + L WCWR+FM+KLWN GL+D+ T+N+CN LE
Sbjct: 574 ACEAFSRLHGPIMVRTPHLIWCWRVFMVKLWNHGLLDARTMNNCNTFLE 622
Score = 63 bits (152), Expect = 4e-010
Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Frame = -3
Query: 1147 RVRERMCRQNCCAKSSQEEEVISPPDENLLIYCKPVRLYNILRIRSLFNPSFLPRCLSYK 968
R E+MC ++ + S+EEE+ + +E+L YCKPV LYNI++ R++ NP FL RCL YK
Sbjct: 16 RSTEQMCHEDSRLRISEEEEIAA--EESLAAYCKPVELYNIIQRRAIRNPLFLQRCLHYK 73
Query: 967 I 965
I
Sbjct: 74 I 74
>TAIR9_protein||AT5G51230.3 | Symbols: EMF2, VEF2, CYR1 | EMF2 (EMBRYONIC FLOWER
2); DNA binding / transcription factor | chr5:20824153-20829344
FORWARD
Length = 627
Score = 232 bits (591), Expect = 4e-061
Identities = 107/169 (63%), Positives = 132/169 (78%)
Frame = -2
Query: 773 SPAIAQCSMNSNAKAVLTSEAVAHAAKTRKLSAERSEARSNLLLQKRQFYHSHRVQPMSL 594
SPA Q + + + + AKTRK+S ERS+ R+ LLQKRQF+HSHR QPM+L
Sbjct: 454 SPADVQSCGDPDYVQSIAGSTMLQFAKTRKISIERSDLRNRSLLQKRQFFHSHRAQPMAL 513
Query: 593 EQVMSDRDSEDEVDDDVADLEDRQMLDDFVDVNKNEKRFMHLWNSFVRKQRVVADGHIPW 414
EQV+SDRDSEDEVDDDVAD EDR+MLDDFVDV K+EK+ MH+WNSFVRKQRV+ADGHIPW
Sbjct: 514 EQVLSDRDSEDEVDDDVADFEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPW 573
Query: 413 ACEAFSKFHKEELLHSSPLCWCWRLFMIKLWNIGLVDSATINSCNVILE 267
ACEAFS+ H ++ + L WCWR+FM+KLWN GL+D+ T+N+CN LE
Sbjct: 574 ACEAFSRLHGPIMVRTPHLIWCWRVFMVKLWNHGLLDARTMNNCNTFLE 622
Score = 63 bits (152), Expect = 4e-010
Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Frame = -3
Query: 1147 RVRERMCRQNCCAKSSQEEEVISPPDENLLIYCKPVRLYNILRIRSLFNPSFLPRCLSYK 968
R E+MC ++ + S+EEE+ + +E+L YCKPV LYNI++ R++ NP FL RCL YK
Sbjct: 16 RSTEQMCHEDSRLRISEEEEIAA--EESLAAYCKPVELYNIIQRRAIRNPLFLQRCLHYK 73
Query: 967 I 965
I
Sbjct: 74 I 74
>TAIR9_protein||AT2G35670.1 | Symbols: FIS2, FIE2 | FIS2 (FERTILIZATION
INDEPENDENT SEED 2); transcription factor | chr2:14992721-14996558
FORWARD
Length = 756
Score = 180 bits (455), Expect = 3e-045
Identities = 89/182 (48%), Positives = 123/182 (67%), Gaps = 7/182 (3%)
Frame = -2
Query: 737 AKAVLTSEAVAHAAKTRKLSAERSEARSNLLLQKRQFYHSHRVQPMSLEQVMSDRDSEDE 558
AKA + V ++ ++L AER EA+ L+ RQFYHS +QP++ EQVMS+ DSE+E
Sbjct: 572 AKAEPSEPKVTRVSRRKELHAERCEAKRLERLKGRQFYHSQTMQPITFEQVMSNEDSENE 631
Query: 557 VDDDVADLEDRQMLDDFVDVNKNEKRFMHLWNSFVRKQRVVADGHIPWACEAFSKFHKEE 378
DD D+ +R L+ V V+K EKR+M+LWN FVRKQRV+ADGH+PWACE F+K HKEE
Sbjct: 632 TDDYALDISERLRLERLVGVSKEEKRYMYLWNIFVRKQRVIADGHVPWACEEFAKLHKEE 691
Query: 377 LLHSSPLCWCWRLFMIKLWNIGLVDSATINSC-NVILENCD------SNSDKNNNDKKSV 219
+ +SS W WR+F IKLWN GL+ + T + C ++L N D S S N N+++S+
Sbjct: 692 MKNSSSFDWWWRMFRIKLWNNGLICAKTFHKCTTILLSNSDEAGQFTSGSAANANNQQSM 751
Query: 218 DV 213
+V
Sbjct: 752 EV 753
>TAIR9_protein||AT4G16810.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein match is:
VRN2 (REDUCED VERNALIZATION RESPONSE 2); transcription factor
(TAIR:AT4G16845.2); Has 141 Blast hits to 141 proteins in 50 species:
Archae - 0; Bacteria - 0; Metazoa - 66; Fungi - 0; Plants - 71; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr4:9460072-9462253
REVERSE
Length = 301
Score = 178 bits (449), Expect = 1e-044
Identities = 96/183 (52%), Positives = 126/183 (68%), Gaps = 13/183 (7%)
Frame = -2
Query: 686 KLSAERSEARSNLL-LQKRQFYHSHRVQPMSLEQVMSDRDSEDEVD--DDVADLEDRQML 516
K+ A+RS+A S+ L L KRQFYHS QP+SLEQVMSDRDSE++VD DD A LE+ QML
Sbjct: 11 KVPAKRSKATSHYLPLHKRQFYHSRTGQPLSLEQVMSDRDSENDVDKNDDAAHLEESQML 70
Query: 515 DDFVDVNK-NEKRFMHLWNSFVRKQRVVADGHIPWACEAFSKFHKEELLHSSPLCWCWRL 339
+ +D N+ +RF+ LWNSFV++QR+VAD HIPWACEAFS+ H +EL + L CWR
Sbjct: 71 NGSMDENEIVAERFIKLWNSFVKQQRIVADAHIPWACEAFSRLHLQELRSNLSLDLCWRQ 130
Query: 338 FMIKLWNIGLVDSATINSCNVILEN--CDSNSDKNNNDKKSVDVGIDINSNAMDVDEDLN 165
FMIK W+ GL+D T+N CN I+ + +N D NNN+ ++ D N VD+D+N
Sbjct: 131 FMIKQWDYGLLDRVTMNKCNTIIYHNISTTNDDINNNNTRTTD-------NMDVVDDDIN 183
Query: 164 NSK 156
K
Sbjct: 184 RDK 186
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,574,253,012
Number of Sequences: 33410
Number of Extensions: 9574253012
Number of Successful Extensions: 322747321
Number of sequences better than 0.0: 0
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