BLASTX 7.6.2
Query= UN18455 /QuerySize=995
(994 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297810421|ref|XP_002873094.1| predicted protein [Arabidopsis ... 132 1e-028
gi|297810423|ref|XP_002873095.1| predicted protein [Arabidopsis ... 131 3e-028
gi|145334285|ref|NP_001078524.1| RNA-binding (RRM/RBD/RNP motifs... 127 3e-027
gi|297831128|ref|XP_002883446.1| predicted protein [Arabidopsis ... 126 7e-027
gi|297806867|ref|XP_002871317.1| predicted protein [Arabidopsis ... 123 6e-026
gi|297806309|ref|XP_002871038.1| predicted protein [Arabidopsis ... 117 3e-024
gi|15242768|ref|NP_195968.1| RNA-binding (RRM/RBD/RNP motifs) fa... 116 7e-024
gi|297851804|ref|XP_002893783.1| predicted protein [Arabidopsis ... 113 6e-023
gi|7378635|emb|CAB83311.1| putative protein [Arabidopsis thaliana] 101 2e-019
gi|297849788|ref|XP_002892775.1| predicted protein [Arabidopsis ... 95 1e-017
gi|297810419|ref|XP_002873093.1| predicted protein [Arabidopsis ... 92 1e-016
gi|5923685|gb|AAD56336.1|AC009326_23 hypothetical protein [Arabi... 79 1e-012
gi|334185184|ref|NP_187528.2| RNA recognition motif-containing p... 79 1e-012
gi|297792673|ref|XP_002864221.1| predicted protein [Arabidopsis ... 78 2e-012
gi|79537384|ref|NP_200181.2| RNA-binding (RRM/RBD/RNP motifs) fa... 76 7e-012
gi|297828670|ref|XP_002882217.1| predicted protein [Arabidopsis ... 71 3e-010
gi|297788920|ref|XP_002862489.1| predicted protein [Arabidopsis ... 70 4e-010
gi|297810599|ref|XP_002873183.1| predicted protein [Arabidopsis ... 70 4e-010
gi|297788311|ref|XP_002862284.1| predicted protein [Arabidopsis ... 68 2e-009
>gi|297810421|ref|XP_002873094.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 132 bits (331), Expect = 1e-028
Identities = 90/224 (40%), Positives = 123/224 (54%), Gaps = 29/224 (12%)
Frame = -3
Query: 908 MDESAIKG---LELNGCEAEIRESRI-----SRIVVEGYDTSLRREDVEEALRKHFASCG 753
MDE+AIKG LELN ++ ES + I VEGYDT LR+ ++ L KHFASCG
Sbjct: 1 MDETAIKGLKLLELNDSGSDSGESNCCSCTSTTISVEGYDTWLRKYPLKLVLEKHFASCG 60
Query: 752 NIIHVYVPINEETDIPNRFSFIYVNGED-EEKALRLNGSDMGGRILQTYAYPFQENYLDD 576
I ++YVP + E I +F+ + GE EEKAL+L+G+D+GG P Q+ ++DD
Sbjct: 61 EITNIYVPTDFERGILKSVAFMRIEGEGAEEKALQLSGTDVGGWTAIVKPAPSQKVFMDD 120
Query: 575 -----VLATLKEARQTQRTLKVTGYDPSLSMDDVESKLCKHFAPASCFAYRTCGGL---- 423
A ++VTGYD SL D++ L KHF+ +CG +
Sbjct: 121 PWYAGPRCAAAPADTKTHMIRVTGYDTSLPKIDMQIALYKHFS--------SCGSIWKVI 172
Query: 422 ---KSKAFVYLVGEDDVEKALELSGRCVGGLNIVVTQVLPKKPI 300
AF+YL GE V+KALELSGR +GG +VV V+P+ I
Sbjct: 173 VLSSGAAFIYLEGERCVDKALELSGRNMGGSTLVVEPVVPRPDI 216
>gi|297810423|ref|XP_002873095.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 131 bits (327), Expect = 3e-028
Identities = 86/206 (41%), Positives = 120/206 (58%), Gaps = 16/206 (7%)
Frame = -3
Query: 908 MDESAIKG---LELNGCEAEIRESRISRIVVEGYDTSLRREDVEEALRKHFASCGNIIHV 738
MDESAIKG LELN A R+ R + I VEGYDT LR ++ AL KHFASCG I +
Sbjct: 1 MDESAIKGLKLLELNDSGAVSRKPRKTTISVEGYDTRLREYTLKLALEKHFASCGKITTI 60
Query: 737 YVPINEETDIPNRFSFIYVNGED-EEKALRLNGSDMGGRILQTYAYPFQENYLDDVLATL 561
YVP + + I +F+++ G+D EEKAL+L+G+D+GG P Q++ +D +
Sbjct: 61 YVPRDYKRGILKSVTFMWIKGDDAEEKALQLSGTDVGGWTALVKPAPSQKDIMDPWCPAM 120
Query: 560 KEARQTQRTLKVTGYDPSLSMDDVESKLCKHFAPASC-----FAYRTCGGLKSKAFVYLV 396
+TQR ++VTGYD L D++ LC+HF +SC CG +YL
Sbjct: 121 LSKHETQR-VRVTGYDTWLPEIDIQIALCEHF--SSCGEVTQVMVLPCG----SGSIYLE 173
Query: 395 GEDDVEKALELSGRCVGGLNIVVTQV 318
E +KAL+L+G +GG+N+VV V
Sbjct: 174 EERCEDKALKLNGCKMGGMNLVVEPV 199
>gi|145334285|ref|NP_001078524.1| RNA-binding (RRM/RBD/RNP motifs) family
protein [Arabidopsis thaliana]
Length = 226
Score = 127 bits (318), Expect = 3e-027
Identities = 88/205 (42%), Positives = 120/205 (58%), Gaps = 11/205 (5%)
Frame = -3
Query: 908 MDESAIKG---LELNGCEAEIRESRI--SRIVVEGYDTSLRREDVEEALRKHFASCGNII 744
MDESAIKG L+LN A R+ RI ++I VEGYDT LR V+ L KHFASCG I
Sbjct: 1 MDESAIKGMKLLQLNEIGANSRKPRIPWTKISVEGYDTRLREYTVKLVLEKHFASCGKIT 60
Query: 743 HVYVPINEETDIPNRFSFIYVNGE-DEEKALRLNGSDMGGRILQTYAYPFQENYLDDVLA 567
H+YVP + E I +F+ + GE EEKAL L+G+D GG +Q+ +D L
Sbjct: 61 HIYVPRDFERGILKSVAFMCIKGEGGEEKALLLSGTDAGGWTAIVKPALWQKEIMDPWLP 120
Query: 566 TLKEARQTQRTLKVTGYDPSLSMDDVESKLCKHFAPASCFAYRTCGGLKS-KAFVYLVGE 390
+ + +T R ++VTGYD + D++ LC+HF +SC L S +YL GE
Sbjct: 121 GMPKL-ETHR-VRVTGYDTCVPKIDIQMALCEHF--SSCGEVTQVVVLPSGSGSIYLQGE 176
Query: 389 DDVEKALELSGRCVGGLNIVVTQVL 315
+KAL+L+G +GG+N+VV VL
Sbjct: 177 RCEDKALQLNGCKMGGMNLVVESVL 201
>gi|297831128|ref|XP_002883446.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 319
Score = 126 bits (315), Expect = 7e-027
Identities = 81/209 (38%), Positives = 119/209 (56%), Gaps = 9/209 (4%)
Frame = -3
Query: 905 DESAIKGLELNGCEAEIRESRISRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPI 726
D+S + +G +++ + + VEGYDT LR+ ++ L KHFASCG I ++YVP
Sbjct: 23 DDSGDDSGDDSGADSQTPRISSTTVSVEGYDTWLRKYPLKLVLEKHFASCGEITNIYVPT 82
Query: 725 NEETDIPNRFSFIYVNGED-EEKALRLNGSDMGGRILQTYAYPFQENYLDD-----VLAT 564
+ E I +F+ + GE EEKAL+L+G+D+GG P+Q+ ++DD
Sbjct: 83 DFERGILKSVAFMRIEGEGAEEKALQLSGTDIGGWTAIVKPAPWQKVFMDDPRYAGPRCA 142
Query: 563 LKEARQTQRTLKVTGYDPSLSMDDVESKLCKHFAPASCFAYRTCGGLKS-KAFVYLVGED 387
A +++TGYD SL D++ L KHF +SC + LKS AF+YL GE
Sbjct: 143 AAPADTKTHMIRITGYDTSLPKIDMQIALYKHF--SSCGSIWKVIVLKSGAAFIYLEGER 200
Query: 386 DVEKALELSGRCVGGLNIVVTQVLPKKPI 300
V+KALELSGR +GG +VV V+P+ I
Sbjct: 201 CVDKALELSGRNMGGSTLVVEPVVPRPDI 229
>gi|297806867|ref|XP_002871317.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 313
Score = 123 bits (307), Expect = 6e-026
Identities = 87/214 (40%), Positives = 117/214 (54%), Gaps = 13/214 (6%)
Frame = -3
Query: 908 MDESAIKGLELNGCEAEIRESRISRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVP 729
MDE A K +EL G +A+IR+ V GYDTS+ D+ ALRKHFASCG I +
Sbjct: 1 MDEYAAKEMELMGHDADIRKRSCISFSVTGYDTSVAYYDLNRALRKHFASCGRIRQCCIS 60
Query: 728 INEETDIPNRFSFIYVNGEDEE--KALRLNGSDMGGRILQTYAYPFQ--ENYLDDVLATL 561
+ E + F+++ + GE K L LNGSD GG L A P Q L A +
Sbjct: 61 RDPERGYLSSFAWMAIRGEKGTGGKVLDLNGSDFGGCKLFVEASPSQGPNIELSSEAAAV 120
Query: 560 KEARQ---TQRTLKVTGYDPSLSMDDVESKLCKHFAP----ASCFAYRTCGG-LKSKAFV 405
+ AR + V+G+DP L D+ES L +HF+ + +R GG +KS AF+
Sbjct: 121 RSARSRLFRSIIVSVSGFDPWLPEHDLESSLRRHFSSCGEVTNISIHRGPGGIIKSPAFI 180
Query: 404 YLVGEDDVEKALELSGRCVGGLNIVVTQVLPKKP 303
+L+GED E+ALELSG VGG + V +VLP P
Sbjct: 181 FLLGEDAAEQALELSGSDVGGWKVAV-KVLPLPP 213
>gi|297806309|ref|XP_002871038.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 248
Score = 117 bits (293), Expect = 3e-024
Identities = 79/210 (37%), Positives = 117/210 (55%), Gaps = 11/210 (5%)
Frame = -3
Query: 905 DESAIKGLELNGCEAEIRESRISRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPI 726
D+S + +G +++ + + VEGYDT LR+ ++ L KHFASCG I ++YVP
Sbjct: 23 DDSGDDSGDDSGADSQTPRISSTTVSVEGYDTWLRKYPLKLVLEKHFASCGEITNIYVPT 82
Query: 725 NEETDIPNRFSFIYVNGED-EEKALRLNGSDMGGRILQTYAYPFQENYLDDV------LA 567
+ E I +F+ + GE EEKAL+L+G+D+GG P Q+ ++DD A
Sbjct: 83 DFERGILKSVAFMRIEGEGAEEKALQLSGTDVGGWTAIVKPAPSQKVFMDDPWYAGPRCA 142
Query: 566 TLKEARQTQRTLKVTGYDPSLSMDDVESKLCKHFAPASC-FAYRTCGGLKSKAFVYLVGE 390
+T R ++VTGYD SL D++ LCKHF +SC + + AF+ L GE
Sbjct: 143 AAPADTKTHR-IRVTGYDTSLPEIDMQIALCKHF--SSCGYVSKVIVLSSGAAFLCLKGE 199
Query: 389 DDVEKALELSGRCVGGLNIVVTQVLPKKPI 300
V+KALELS +GG +VV V+P+ I
Sbjct: 200 RCVDKALELSRCNMGGRTLVVEPVVPRPDI 229
>gi|15242768|ref|NP_195968.1| RNA-binding (RRM/RBD/RNP motifs) family protein
[Arabidopsis thaliana]
Length = 321
Score = 116 bits (289), Expect = 7e-024
Identities = 79/184 (42%), Positives = 108/184 (58%), Gaps = 6/184 (3%)
Frame = -3
Query: 848 SRISRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINEETDIPNRFSFIYVNGED 669
S I+ I VEGYDTSL++ +E L KHF SCG I HVYVP + E + +F+ + GE
Sbjct: 110 SPITTISVEGYDTSLQKYLLELILEKHFDSCGEIRHVYVPTDYERGVLKSVAFLRIEGEG 169
Query: 668 -EEKALRLNGSD-MGGRILQTYAYPFQENYLDDVLATLKEARQTQRTLKVTGYDPSLSMD 495
E+KAL+L+G+D +G ++ + F +N AT EA + R +VTGYD SL
Sbjct: 170 AEDKALQLSGTDVVGWTVIVKPSEIFYDN-SSRAPATTPEASKIHR-FRVTGYDASLPEI 227
Query: 494 DVESKLCKHFAPASCFAYRTCGGLKSKAFVYLVGEDDVEKALELSGRCVGGLNIVVTQVL 315
D++ LCKHF +SC L S AFV L GE V+KALELSG +G +VV + +
Sbjct: 228 DIQMALCKHF--SSCGEIWQVTVLSSTAFVSLRGERCVDKALELSGCNMGERTLVVNEPV 285
Query: 314 PKKP 303
+P
Sbjct: 286 VPQP 289
Score = 81 bits (198), Expect = 3e-013
Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 7/98 (7%)
Frame = -3
Query: 908 MDESAI---KGLELNGCEAEIRESRISRIVVEGYDTSLRREDVEEALRKHFASCGNIIHV 738
M+ESAI K LELN + ++S + I VEGYDTSL+ + AL KHFASCG I +
Sbjct: 1 MEESAIKRLKSLELNDSD---KQSTSTAICVEGYDTSLKEYPLRLALTKHFASCGEITQI 57
Query: 737 YVPINEETDIPNRFSFIYVNGED-EEKALRLNGSDMGG 627
YVP + + I SF+++ GE E+KAL+L+G+D+GG
Sbjct: 58 YVPRDFKKKILKSVSFMWIKGEGAEDKALQLSGTDVGG 95
>gi|297851804|ref|XP_002893783.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 276
Score = 113 bits (281), Expect = 6e-023
Identities = 63/129 (48%), Positives = 84/129 (65%), Gaps = 3/129 (2%)
Frame = -3
Query: 839 SRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINEETDIPNRFSFIYVNGED-EE 663
SRI VEGYDTSL D++ ALRKHF+SCG I H+YVP + E +I F+FI++ GE EE
Sbjct: 59 SRICVEGYDTSLHEYDLKLALRKHFSSCGEITHIYVPRDFERNILKSFAFIHIAGEGAEE 118
Query: 662 KALRLNGSDMGGRILQTYAYPFQENYLDDVLATLKEARQT--QRTLKVTGYDPSLSMDDV 489
KAL L+GSD GG + + P+ Y+D AT + R + QR + VTGYD SL D+
Sbjct: 119 KALALSGSDAGGWNVFAKSSPYDGQYVDPGRATAESPRFSLPQRKMIVTGYDTSLPEIDI 178
Query: 488 ESKLCKHFA 462
+ +L HF+
Sbjct: 179 QIRLSNHFS 187
>gi|7378635|emb|CAB83311.1| putative protein [Arabidopsis thaliana]
Length = 248
Score = 101 bits (251), Expect = 2e-019
Identities = 72/194 (37%), Positives = 104/194 (53%), Gaps = 8/194 (4%)
Frame = -3
Query: 821 GYDTSLRREDVEEALRKHFASCGNIIHVYVPINEETDIPNRFSFIYVNGE-DEEKALRLN 645
GYDT LR V+ L KHFASCG I H+YVP + E I +F+ + GE EEKAL L+
Sbjct: 18 GYDTRLREYTVKLVLEKHFASCGKITHIYVPRDFERGILKSVAFMCIKGEGGEEKALLLS 77
Query: 644 GSDMGGRILQTYAYPFQENYLDDVLATLKEARQTQRTLKVTGYDPSLSMDDVESKLCKHF 465
G+D GG +Q+ +D L + + +T R ++VTGYD + D++ LC+HF
Sbjct: 78 GTDAGGWTAIVKPALWQKEIMDPWLPGMPKL-ETHR-VRVTGYDTCVPKIDIQMALCEHF 135
Query: 464 APASCFAYRTCGGLKS-KAFVYLVGEDDVEKALELSGRCVGGLNIVVTQVLPKKPIKCGY 288
+SC L S +YL GE +KAL+L+G +GG+N+ L KK ++
Sbjct: 136 --SSCGEVTQVVVLPSGSGSIYLQGERCEDKALQLNGCKMGGMNLAYE--LKKKKMEMEM 191
Query: 287 TRPLN*LMSRKLIE 246
+ +K IE
Sbjct: 192 EMEMGEKKKKKKIE 205
>gi|297849788|ref|XP_002892775.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 95 bits (235), Expect = 1e-017
Identities = 65/156 (41%), Positives = 88/156 (56%), Gaps = 20/156 (12%)
Frame = -3
Query: 881 ELNGCEAEIRESRISRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINEETDIPN 702
+LNGC S + RI VEGYDTS+ D++ ALRKHF+SCG + +V VP + I
Sbjct: 7 QLNGC------STVCRISVEGYDTSVHAYDLKLALRKHFSSCGEVKNVNVPKDFVRGILK 60
Query: 701 RFSFIYVNGEDE-EKALRLNGSDMGGRILQTYAYPFQENYLDD----VLATLKEARQTQR 537
R ++I + GE EKAL+L+GSD+ G + A PF D ++A +RQ R
Sbjct: 61 RCAYICIVGEGALEKALQLSGSDVRGWTISVKASPFHIPMCIDPGRALVAVAYLSRQEYR 120
Query: 536 TLKVTGYDPSLSMDDVESKLCKHFAPASCFAYRTCG 429
+ VTGYD SL D++ LCKHF+ TCG
Sbjct: 121 -MMVTGYDTSLPELDIQIGLCKHFS--------TCG 147
>gi|297810419|ref|XP_002873093.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 161
Score = 92 bits (226), Expect = 1e-016
Identities = 50/117 (42%), Positives = 75/117 (64%), Gaps = 6/117 (5%)
Frame = -3
Query: 908 MDESAIKGLEL-----NGCEAEIRESRISRIVVEGYDTSLRREDVEEALRKHFASCGNII 744
M+ESAIKGL+L +G +++ S + I VEGY+T+L+ + AL KHFASCG I
Sbjct: 1 MEESAIKGLKLLEFNDSGADSQTHSSTSTAISVEGYNTTLKEYPLRLALAKHFASCGKIT 60
Query: 743 HVYVPINEETDIPNRFSFIYVNGED-EEKALRLNGSDMGGRILQTYAYPFQENYLDD 576
+YVP + + + R SF+++ G+D EEKAL+L+G+D+GG P Q+ + DD
Sbjct: 61 QIYVPRDFKKKLLKRASFVWIEGDDAEEKALQLSGTDVGGWTAIVKPVPSQKIFYDD 117
>gi|5923685|gb|AAD56336.1|AC009326_23 hypothetical protein [Arabidopsis
thaliana]
Length = 198
Score = 79 bits (193), Expect = 1e-012
Identities = 53/132 (40%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
Frame = -3
Query: 905 DESAIKGLELNGCEAEIRESRISRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPI 726
DE A KGLE+ +IR+S I RI V GYD L RE VE L+K F+ CG I V++P
Sbjct: 2 DEIANKGLEVKR-SRKIRDSDIERISVTGYDIELPREHVESELKKLFSPCGEITDVHIPE 60
Query: 725 NEETDIPNRFSFIYVNGE-DEEKALRLNGSDMGGRILQTYAYPFQENYLDDVLATLKEAR 549
+ + + +FIY GE +KAL+LNGSDMGG + A PF + + + L
Sbjct: 61 TRNSSLWSH-AFIYFVGEGTADKALQLNGSDMGGWTVDAEADPFPKEEDNFSIVYLLGED 119
Query: 548 QTQRTLKVTGYD 513
+ K++G D
Sbjct: 120 AIDKAPKLSGTD 131
>gi|334185184|ref|NP_187528.2| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 132
Score = 79 bits (192), Expect = 1e-012
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Frame = -3
Query: 905 DESAIKGLELNGCEAEIRESRISRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPI 726
DE A KGLE+ +IR+S I RI V GYD L RE VE L+K F+ CG I V++P
Sbjct: 2 DEIANKGLEVKR-SRKIRDSDIERISVTGYDIELPREHVESELKKLFSPCGEITDVHIPE 60
Query: 725 NEETDIPNRFSFIYVNGE-DEEKALRLNGSDMGGRILQTYAYPF 597
+ + + +FIY GE +KAL+LNGSDMGG + A PF
Sbjct: 61 TRNSSLWSH-AFIYFVGEGTADKALQLNGSDMGGWTVDAEADPF 103
>gi|297792673|ref|XP_002864221.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 240
Score = 78 bits (191), Expect = 2e-012
Identities = 56/136 (41%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Frame = -3
Query: 866 EAEIRESRISRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINEETDIPNRFSFI 687
E R+S IS I VEGYDTSL ++ ALRKHFASCG I ++VP + + I FI
Sbjct: 13 ELNCRKS-ISTISVEGYDTSLHGYPLKLALRKHFASCGKIASMFVPRDFKRGILKSPLFI 71
Query: 686 YVNGED-EEKALRLNGSDMGGRILQTYAYPFQENYLDDVLATLKEARQTQRTLKVTGYDP 510
GE +KAL L+GSD+G + A P QE+Y D + + +KV
Sbjct: 72 DFWGEGARDKALELSGSDVGRWNVVVKAVPRQEDYYDPAGFNFFRG-ERELVVKVYDLPS 130
Query: 509 SLSMDDVESKLCKHFA 462
S+ DV+ LCKHF+
Sbjct: 131 SVRKIDVQIGLCKHFS 146
>gi|79537384|ref|NP_200181.2| RNA-binding (RRM/RBD/RNP motifs) family protein
[Arabidopsis thaliana]
Length = 251
Score = 76 bits (186), Expect = 7e-012
Identities = 56/152 (36%), Positives = 82/152 (53%), Gaps = 12/152 (7%)
Frame = -3
Query: 899 SAIKGLELNGCEAEIRESRISRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINE 720
SA++GLE S+I VEGYDTS+ ++ AL KHFASCG I+ + VP +
Sbjct: 4 SAVRGLESKDTN---NRKCFSKISVEGYDTSVHEFPLKLALAKHFASCGKIVDIDVPRDF 60
Query: 719 ETDIPNRFSFIYVNGEDEE----KALRLNGSDMGGRILQTYAYPFQENYLDDVLATLKEA 552
+ I FI + ++ E KAL L+G+D+GG + + P Q+ Y D +
Sbjct: 61 KKRILKSPLFIIFHAKEGESPVDKALELSGTDVGGWNVVVKSLPGQQMYRDPGGV---DR 117
Query: 551 RQTQRTLKVTGYD--PSLSMDDVESKLCKHFA 462
+ +RTL V YD +LS D++ LCKHF+
Sbjct: 118 FKGERTLIVKVYDTPSTLSKIDLQIGLCKHFS 149
>gi|297828670|ref|XP_002882217.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 195
Score = 71 bits (172), Expect = 3e-010
Identities = 45/105 (42%), Positives = 59/105 (56%), Gaps = 4/105 (3%)
Frame = -3
Query: 887 GLELNGCEAEIRESRISRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINEETDI 708
G E NG +A RI VEGYDTS+ D+E AL KHF+SCG I H+Y+P N E I
Sbjct: 3 GFESNGSDAS--NIPKDRIRVEGYDTSIYEYDLELALTKHFSSCGEISHIYIPRNFEKGI 60
Query: 707 PNRFSFI-YVNGEDEEKALRLNGSDM-GGRILQTYAYPFQENYLD 579
F+F+ + EKAL L+ S + GG + PF +Y+D
Sbjct: 61 LKSFAFVDFATEGAVEKALNLSRSAVEGGWRVFAEESPFNGDYID 105
>gi|297788920|ref|XP_002862489.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 156
Score = 70 bits (171), Expect = 4e-010
Identities = 53/132 (40%), Positives = 70/132 (53%), Gaps = 3/132 (2%)
Frame = -3
Query: 866 EAEIRESRISRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINEETDIPNRFSFI 687
E R+S IS I VEGYDTSL ++ ALRKHFASCG I ++VP + + I FI
Sbjct: 13 ELNCRKS-ISTISVEGYDTSLHGYPLKLALRKHFASCGKIASMFVPRDFKRGILKSPLFI 71
Query: 686 YVNGED-EEKALRLNGSDMGGRILQTYAYPFQENYLDDVLATLKEARQTQRTLKVTGYDP 510
GE +KAL L+GSD+G + A P QE+Y D + + +KV
Sbjct: 72 DFWGEGARDKALELSGSDVGRWNVVVKAVPRQEDYYDPAGFNFFRG-ERELVVKVYDLPS 130
Query: 509 SLSMDDVESKLC 474
S+ DV+ LC
Sbjct: 131 SVRKIDVQIGLC 142
>gi|297810599|ref|XP_002873183.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 338
Score = 70 bits (171), Expect = 4e-010
Identities = 39/101 (38%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Frame = -3
Query: 848 SRISRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPI---NEETDIPNRFSFIYVN 678
S + RI V GYDT L +DV AL +HF+SCG I +Y+P+ +T + + +
Sbjct: 12 SDVGRIKVTGYDTGLPLDDVYTALAEHFSSCGEIWEIYIPLKFDETKTSLNSHGVMCLLG 71
Query: 677 GEDE-EKALRLNGSDMGGRILQTYAYPFQENYLDDVLATLK 558
G+D EKAL+L GS++GG + AYP+ N D V+ ++
Sbjct: 72 GQDAVEKALQLTGSNVGGWNVSVEAYPYPANANDRVIVIVE 112
>gi|297788311|ref|XP_002862284.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 68 bits (164), Expect = 2e-009
Identities = 37/69 (53%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Frame = -3
Query: 887 GLELNGCEAEIRESR--ISRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINEET 714
G E NG +A R SRI VEGY+TSL D++ AL KHFASCG II +YVP N E
Sbjct: 1 GFESNGNDASDIPKRRGFSRISVEGYETSLHAYDLKLALTKHFASCGKIISIYVPRNAEK 60
Query: 713 DIPNRFSFI 687
D RF F+
Sbjct: 61 DTIQRFDFV 69
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,166,889,954,044
Number of Sequences: 15229318
Number of Extensions: 2166889954044
Number of Successful Extensions: 554456772
Number of sequences better than 0.0: 0
|
