BLASTX 7.6.2
Query= UN18455 /QuerySize=995
(994 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G03495.1 | Symbols: | nucleotide binding | ch... 127 1e-029
TAIR9_protein||AT5G03480.1 | Symbols: | nucleic acid binding / ... 116 3e-026
TAIR9_protein||AT3G09160.1 | Symbols: | RNA recognition motif (... 79 4e-015
TAIR9_protein||AT5G53700.1 | Symbols: | INVOLVED IN: biological... 76 3e-014
TAIR9_protein||AT1G48920.1 | Symbols: ATNUC-L1, PARL1 | ATNUC-L1... 69 5e-012
TAIR9_protein||AT1G73490.1 | Symbols: | RNA recognition motif (... 61 9e-010
TAIR9_protein||AT5G51730.1 | Symbols: | FUNCTIONS IN: molecular... 58 1e-008
TAIR9_protein||AT5G05430.1 | Symbols: | FUNCTIONS IN: molecular... 55 6e-008
TAIR9_protein||AT4G24420.1 | Symbols: | RNA recognition motif (... 52 7e-007
TAIR9_protein||AT1G72800.1 | Symbols: | nuM1-related | chr1:273... 50 2e-006
>TAIR9_protein||AT5G03495.1 | Symbols: | nucleotide binding |
chr5:873804-875025 REVERSE
Length = 227
Score = 127 bits (318), Expect = 1e-029
Identities = 88/205 (42%), Positives = 120/205 (58%), Gaps = 11/205 (5%)
Frame = -3
Query: 908 MDESAIKG---LELNGCEAEIRESRI--SRIVVEGYDTSLRREDVEEALRKHFASCGNII 744
MDESAIKG L+LN A R+ RI ++I VEGYDT LR V+ L KHFASCG I
Sbjct: 1 MDESAIKGMKLLQLNEIGANSRKPRIPWTKISVEGYDTRLREYTVKLVLEKHFASCGKIT 60
Query: 743 HVYVPINEETDIPNRFSFIYVNGE-DEEKALRLNGSDMGGRILQTYAYPFQENYLDDVLA 567
H+YVP + E I +F+ + GE EEKAL L+G+D GG +Q+ +D L
Sbjct: 61 HIYVPRDFERGILKSVAFMCIKGEGGEEKALLLSGTDAGGWTAIVKPALWQKEIMDPWLP 120
Query: 566 TLKEARQTQRTLKVTGYDPSLSMDDVESKLCKHFAPASCFAYRTCGGLKS-KAFVYLVGE 390
+ + +T R ++VTGYD + D++ LC+HF +SC L S +YL GE
Sbjct: 121 GMPKL-ETHR-VRVTGYDTCVPKIDIQMALCEHF--SSCGEVTQVVVLPSGSGSIYLQGE 176
Query: 389 DDVEKALELSGRCVGGLNIVVTQVL 315
+KAL+L+G +GG+N+VV VL
Sbjct: 177 RCEDKALQLNGCKMGGMNLVVESVL 201
Score = 56 bits (134), Expect = 3e-008
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 8/71 (11%)
Frame = -3
Query: 836 RIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINEETDIPNRFSFIYVNGED-EEK 660
R+ V GYDT + + D++ AL +HF+SCG + V V +P+ IY+ GE E+K
Sbjct: 129 RVRVTGYDTCVPKIDIQMALCEHFSSCGEVTQVVV-------LPSGSGSIYLQGERCEDK 181
Query: 659 ALRLNGSDMGG 627
AL+LNG MGG
Sbjct: 182 ALQLNGCKMGG 192
>TAIR9_protein||AT5G03480.1 | Symbols: | nucleic acid binding / nucleotide
binding | chr5:869208-870855 REVERSE
Length = 322
Score = 116 bits (289), Expect = 3e-026
Identities = 79/184 (42%), Positives = 108/184 (58%), Gaps = 6/184 (3%)
Frame = -3
Query: 848 SRISRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINEETDIPNRFSFIYVNGED 669
S I+ I VEGYDTSL++ +E L KHF SCG I HVYVP + E + +F+ + GE
Sbjct: 110 SPITTISVEGYDTSLQKYLLELILEKHFDSCGEIRHVYVPTDYERGVLKSVAFLRIEGEG 169
Query: 668 -EEKALRLNGSD-MGGRILQTYAYPFQENYLDDVLATLKEARQTQRTLKVTGYDPSLSMD 495
E+KAL+L+G+D +G ++ + F +N AT EA + R +VTGYD SL
Sbjct: 170 AEDKALQLSGTDVVGWTVIVKPSEIFYDN-SSRAPATTPEASKIHR-FRVTGYDASLPEI 227
Query: 494 DVESKLCKHFAPASCFAYRTCGGLKSKAFVYLVGEDDVEKALELSGRCVGGLNIVVTQVL 315
D++ LCKHF +SC L S AFV L GE V+KALELSG +G +VV + +
Sbjct: 228 DIQMALCKHF--SSCGEIWQVTVLSSTAFVSLRGERCVDKALELSGCNMGERTLVVNEPV 285
Query: 314 PKKP 303
+P
Sbjct: 286 VPQP 289
Score = 81 bits (198), Expect = 1e-015
Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 7/98 (7%)
Frame = -3
Query: 908 MDESAI---KGLELNGCEAEIRESRISRIVVEGYDTSLRREDVEEALRKHFASCGNIIHV 738
M+ESAI K LELN + ++S + I VEGYDTSL+ + AL KHFASCG I +
Sbjct: 1 MEESAIKRLKSLELNDSD---KQSTSTAICVEGYDTSLKEYPLRLALTKHFASCGEITQI 57
Query: 737 YVPINEETDIPNRFSFIYVNGED-EEKALRLNGSDMGG 627
YVP + + I SF+++ GE E+KAL+L+G+D+GG
Sbjct: 58 YVPRDFKKKILKSVSFMWIKGEGAEDKALQLSGTDVGG 95
>TAIR9_protein||AT3G09160.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:2805779-2806912 REVERSE
Length = 199
Score = 79 bits (193), Expect = 4e-015
Identities = 53/132 (40%), Positives = 73/132 (55%), Gaps = 3/132 (2%)
Frame = -3
Query: 905 DESAIKGLELNGCEAEIRESRISRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPI 726
DE A KGLE+ +IR+S I RI V GYD L RE VE L+K F+ CG I V++P
Sbjct: 2 DEIANKGLEVKR-SRKIRDSDIERISVTGYDIELPREHVESELKKLFSPCGEITDVHIPE 60
Query: 725 NEETDIPNRFSFIYVNGE-DEEKALRLNGSDMGGRILQTYAYPFQENYLDDVLATLKEAR 549
+ + + +FIY GE +KAL+LNGSDMGG + A PF + + + L
Sbjct: 61 TRNSSLWSH-AFIYFVGEGTADKALQLNGSDMGGWTVDAEADPFPKEEDNFSIVYLLGED 119
Query: 548 QTQRTLKVTGYD 513
+ K++G D
Sbjct: 120 AIDKAPKLSGTD 131
>TAIR9_protein||AT5G53700.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis
thaliana protein match is: nucleic acid binding / nucleotide binding
(TAIR:AT5G03480.1); Has 74 Blast hits to 54 proteins in 11 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses
- 0; Other Eukaryotes - 6 (source: NCBI BLink). |
chr5:21801221-21802546 FORWARD
Length = 252
Score = 76 bits (186), Expect = 3e-014
Identities = 56/152 (36%), Positives = 82/152 (53%), Gaps = 12/152 (7%)
Frame = -3
Query: 899 SAIKGLELNGCEAEIRESRISRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINE 720
SA++GLE S+I VEGYDTS+ ++ AL KHFASCG I+ + VP +
Sbjct: 4 SAVRGLESKDTN---NRKCFSKISVEGYDTSVHEFPLKLALAKHFASCGKIVDIDVPRDF 60
Query: 719 ETDIPNRFSFIYVNGEDEE----KALRLNGSDMGGRILQTYAYPFQENYLDDVLATLKEA 552
+ I FI + ++ E KAL L+G+D+GG + + P Q+ Y D +
Sbjct: 61 KKRILKSPLFIIFHAKEGESPVDKALELSGTDVGGWNVVVKSLPGQQMYRDPGGV---DR 117
Query: 551 RQTQRTLKVTGYD--PSLSMDDVESKLCKHFA 462
+ +RTL V YD +LS D++ LCKHF+
Sbjct: 118 FKGERTLIVKVYDTPSTLSKIDLQIGLCKHFS 149
Score = 58 bits (138), Expect = 1e-008
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Frame = -3
Query: 665 EKALRLNGSDMGGRILQTYAYPFQENYLDDVLATLKEARQTQRTLKVTGYDPSLSMDDVE 486
+KAL L+G+D+GG + + P Q+ Y D + +T +KV +LS D++
Sbjct: 83 DKALELSGTDVGGWNVVVKSLPGQQMYRDPGGVDRFKGERT-LIVKVYDTPSTLSKIDLQ 141
Query: 485 SKLCKHFAPA------SCFAYRTCGGLKSKAFVYLVGEDDVEKALELSGRCVGGLNIVVT 324
LCKHF+ S + +SKA V ++G+ V+KALELSGR G IVV
Sbjct: 142 IGLCKHFSSCGEVTGISVLVHGNLCCHESKARVDIMGKGCVDKALELSGRTADGWKIVVY 201
Query: 323 QVLP 312
V+P
Sbjct: 202 FVVP 205
>TAIR9_protein||AT1G48920.1 | Symbols: ATNUC-L1, PARL1 | ATNUC-L1; nucleic acid
binding / nucleotide binding | chr1:18098186-18101422 FORWARD
Length = 558
Score = 69 bits (166), Expect = 5e-012
Identities = 33/70 (47%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Frame = -3
Query: 836 RIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINEETDIPNRFSFIYVNGEDEEKA 657
+I V+G+D SL +D++ LR+HF+SCG I +V VPI+ +T +++ + E +EKA
Sbjct: 402 KIFVKGFDASLSEDDIKNTLREHFSSCGEIKNVSVPIDRDTGNSKGIAYLEFS-EGKEKA 460
Query: 656 LRLNGSDMGG 627
L LNGSDMGG
Sbjct: 461 LELNGSDMGG 470
>TAIR9_protein||AT1G73490.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:27633496-27634867 REVERSE
Length = 260
Score = 61 bits (147), Expect = 9e-010
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Frame = -3
Query: 839 SRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINEETDIPNRFSFIYVNGEDEEK 660
S + V+G+DTS R +++ AL HF+SCG + +YVPI T ++FI + ++E K
Sbjct: 117 SALFVQGFDTSHPRHEIKTALWNHFSSCGKVYLIYVPIACSTGASVGYAFI--DMKNETK 174
Query: 659 ALRLNGSDMGGRILQT-YAYPFQENYLDDVLATLKEAR 549
L LNGS +GGR + +A +E Y L + R
Sbjct: 175 GLTLNGSHLGGRKIDVMFAIDREEFYFSSNLKHCQRCR 212
>TAIR9_protein||AT5G51730.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein match is:
ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding /
nucleotide binding (TAIR:AT3G18610.1); Has 68 Blast hits to 54 proteins
in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants
- 61; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). |
chr5:21011418-21013657 FORWARD
Length = 413
Score = 58 bits (138), Expect = 1e-008
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = -3
Query: 833 IVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPINEETDIPNRFSFIYVNGEDEEKAL 654
I V+GYD+SL D+ AL +HF+ CG I +Y N+ + + FI V + E AL
Sbjct: 195 IFVKGYDSSLGENDLARALLEHFSPCGMISRIYFQTNDAGEAVLKHVFI-VMLQGTEDAL 253
Query: 653 RLNGSDMGGRILQTY 609
+LNGSDMGG L+ +
Sbjct: 254 KLNGSDMGGCNLEVH 268
>TAIR9_protein||AT5G05430.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: stem, leaf; EXPRESSED DURING:
LP.04 four leaves visible; BEST Arabidopsis thaliana protein match is:
RNA recognition motif (RRM)-containing protein (TAIR:AT3G09160.1); Has
23 Blast hits to 21 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr5:1605275-1606703 REVERSE
Length = 159
Score = 55 bits (131), Expect = 6e-008
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Frame = -3
Query: 842 ISRIVVEGYDTSLRREDVEEALRKHFASCGNIIHVYVPI--NEETDIPNRFSFIYVNGED 669
+ RI V GYDT L +D+ AL +HF+SCG I +Y+P+ +E I NRF ++
Sbjct: 22 VGRIKVTGYDTGLPLDDLYTALAEHFSSCGEIWEIYIPLKFDETNTILNRFWWLLPPPFL 81
Query: 668 EEKALRLNGSDMGGRILQTYAYPFQENYLDDVLATL 561
+ ++N +GG + AYP+ + D V A +
Sbjct: 82 SNSSAQVN---VGGWNVSVEAYPYPAHANDSVRAVV 114
>TAIR9_protein||AT4G24420.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:12627096-12627359 FORWARD
Length = 88
Score = 52 bits (122), Expect = 7e-007
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = -3
Query: 791 VEEALRKHFASCGNIIHVYVPINEETDIPNRFSFIYVNGED-EEKALRLNGSDMGGRILQ 615
++EAL HF SCG I V + ETD+ N + I + G D +EK + LNGS++GGR L
Sbjct: 1 MKEALTNHFKSCGVIAMVSFRRHPETDVVNGLATITMMGNDADEKVMLLNGSELGGRKLV 60
Query: 614 TYAYPFQENYLD 579
A P LD
Sbjct: 61 VKANPTPRLKLD 72
>TAIR9_protein||AT1G72800.1 | Symbols: | nuM1-related | chr1:27397266-27398273
FORWARD
Length = 336
Score = 50 bits (119), Expect = 2e-006
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Frame = -3
Query: 539 RTLKVTGYDPSLSMDDVESKLCKHFAP----ASCFAYRTCGGLKSKAFVYLVGEDDVEKA 372
R+ VTG+D SL +DD++S L K+F+ F + G S + Y+ ++ EKA
Sbjct: 234 RSFSVTGFDASLPVDDIKSALSKYFSSFGEITRVFVPPSHGTGGSLGYAYIDLKEGAEKA 293
Query: 371 LELSGRCVGGLNIVVTQVLPKKPIKCGYTRP 279
LEL VGG ++VV + +PI+ G T P
Sbjct: 294 LELGRHDVGGWDLVVGKA---EPIRSGSTWP 321
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,617,535,435
Number of Sequences: 33410
Number of Extensions: 9617535435
Number of Successful Extensions: 322759691
Number of sequences better than 0.0: 0
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