BLASTX 7.6.2
Query= UN18575 /QuerySize=1045
(1044 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G17170.1 | Symbols: RFC3 | RFC3 (REGULATOR OF ... 493 1e-139
>TAIR9_protein||AT3G17170.1 | Symbols: RFC3 | RFC3 (REGULATOR OF FATTY-ACID
COMPOSITION 3); structural constituent of ribosome |
chr3:5853186-5854853 REVERSE
Length = 315
Score = 493 bits (1267), Expect = 1e-139
Identities = 248/305 (81%), Positives = 277/305 (90%), Gaps = 11/305 (3%)
Frame = +1
Query: 40 MESLLHASSSLLSLRPRIDGRDSFINSPRVCLIPSLAPRGSKSLPLVVAAAKKKKSKKDD 219
MESLLHASSSL+SLRPRIDGRDSFIN RVCL PSL RGSK LPL VAAAKKKKSKKDD
Sbjct: 1 MESLLHASSSLVSLRPRIDGRDSFINPSRVCLNPSLGRRGSKPLPL-VAAAKKKKSKKDD 59
Query: 220 SHSFSARPDEATGPFPESILLKEKKIDEEGDLLPEFADDEEKELYEFLDLQLQSDLNEER 399
+H+FSARPDEATGPFPESILLKEKKIDEEGDLLPEFAD EEKELY+FLDLQLQSDLNEER
Sbjct: 60 NHNFSARPDEATGPFPESILLKEKKIDEEGDLLPEFADAEEKELYQFLDLQLQSDLNEER 119
Query: 400 MRHYEVVYLIHEKHAEEVESVNEKVQEFLKEKKGKVWRFSDWGMRRLAYKIQKAENAHYI 579
MRHYEVVYLIHEKHAEEVES+N+KVQ++LKEKKGKVWRFSDWGMRRLAYKIQKAENAHYI
Sbjct: 120 MRHYEVVYLIHEKHAEEVESINQKVQDYLKEKKGKVWRFSDWGMRRLAYKIQKAENAHYI 179
Query: 580 LMNFEMEAKHLNEFKGMLDSDERVIRHLVMKRDEAITEDCPPPPEFHSVRASMDGDDDFY 759
LMNFE+EAK+LNEFKG+LDSDERVIRHLVMKRDEAITEDCPPPPEFHSVRA D++Y
Sbjct: 180 LMNFEIEAKYLNEFKGLLDSDERVIRHLVMKRDEAITEDCPPPPEFHSVRAG----DEYY 235
Query: 760 DDDDEEEEEEEFDE-----EEEGDDVEYEVDDDGNVVMVVYEDDEE-EQGQDQSNKATRG 921
DDD+EEE EE+ DE EE+ D++EYEVDDDGNVVMV+Y D+EE E+ +D +++ G
Sbjct: 236 DDDEEEEIEEDEDEGEGEDEEDADNIEYEVDDDGNVVMVLYGDEEEGEEEEDGASEQEEG 295
Query: 922 KNRTT 936
++++T
Sbjct: 296 QDKST 300
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,660,019,295
Number of Sequences: 33410
Number of Extensions: 9660019295
Number of Successful Extensions: 322770282
Number of sequences better than 0.0: 0
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