BLASTX 7.6.2
Query= UN18576 /QuerySize=1277
(1276 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G14370.1 | Symbols: | LOCATED IN: chloroplast... 477 7e-135
TAIR9_protein||AT1G73870.1 | Symbols: | zinc finger (B-box type... 96 4e-020
TAIR9_protein||AT1G25440.1 | Symbols: | zinc finger (B-box type... 96 4e-020
TAIR9_protein||AT1G68520.1 | Symbols: | zinc finger (B-box type... 83 4e-016
TAIR9_protein||AT1G07050.1 | Symbols: | CONSTANS-like protein-r... 80 3e-015
TAIR9_protein||AT4G25990.1 | Symbols: CIL | CIL | chr4:13191937-... 79 7e-015
TAIR9_protein||AT5G57180.2 | Symbols: CIA2 | CIA2 (CHLOROPLAST I... 76 4e-014
TAIR9_protein||AT1G49130.1 | Symbols: | zinc finger (B-box type... 73 3e-013
TAIR9_protein||AT1G49130.2 | Symbols: | zinc finger (B-box type... 73 3e-013
TAIR9_protein||AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger... 69 7e-012
TAIR9_protein||AT4G25990.2 | Symbols: CIL | CIL | chr4:13191937-... 68 1e-011
TAIR9_protein||AT5G57180.1 | Symbols: CIA2 | CIA2 (CHLOROPLAST I... 65 6e-011
TAIR9_protein||AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONST... 65 1e-010
TAIR9_protein||AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger... 62 7e-010
TAIR9_protein||AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (... 62 9e-010
TAIR9_protein||AT2G46670.1 | Symbols: | pseudo-response regulat... 62 9e-010
TAIR9_protein||AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | APRR9 (... 62 9e-010
TAIR9_protein||AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (const... 60 3e-009
TAIR9_protein||AT3G02380.1 | Symbols: COL2 | COL2 (constans-like... 60 3e-009
TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); tr... 59 6e-009
>TAIR9_protein||AT5G14370.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis
thaliana protein match is: CIL (TAIR:AT4G25990.1); Has 1815 Blast hits
to 1506 proteins in 139 species: Archae - 0; Bacteria - 8; Metazoa -
291; Fungi - 53; Plants - 1145; Viruses - 0; Other Eukaryotes - 318
(source: NCBI BLink). | chr5:4632147-4633651 REVERSE
Length = 340
Score = 477 bits (1227), Expect = 7e-135
Identities = 263/343 (76%), Positives = 290/343 (84%), Gaps = 19/343 (5%)
Frame = +2
Query: 26 MCSLTSRP-TGEAKQSKRRSKRIRKRKQMESTSM--DKSPSNLETSRKQIRTKTKRPKFL 196
MCS + P GE KQS R SKRI+KRK E+T+ DKS SNL+ SRK IRTKTK+PKFL
Sbjct: 1 MCSNKASPVVGEEKQSTRSSKRIKKRKNREATTTMEDKSSSNLDASRK-IRTKTKKPKFL 59
Query: 197 SLKLELSTSHEIEESPGATKNKKKKKKHKPSKQSKTKGADTTAFKEKKRAD---TVGGGE 367
SLKLEL+TSHEI E+P ++KK KKK+ KQSK K DTT FKEKKRA+ T+GGGE
Sbjct: 60 SLKLELNTSHEINENP---RSKKSKKKNNNKKQSKKKEPDTTPFKEKKRAETTTTLGGGE 116
Query: 368 KEEEQYETVAAYLFSSAATDSSMSSINDLLPSSAA-HVDC-SERKDLSPYDR--GGSPSS 535
KEEEQY+TVAAYLF+S ATDS++SSI+DLLPSSAA VDC ER +LSPYDR GS SS
Sbjct: 117 KEEEQYDTVAAYLFNS-ATDSTISSIHDLLPSSAATDVDCGGERNNLSPYDRQDHGSSSS 175
Query: 536 SLLKTAMRKGASKEEETTEERWVSYSEVVEEVMSRSGTPR----PDGKDRRRSLALKLDY 703
SLL+TAMRKGAS+EEETTEERWVSYSEVVEEVMSRSGTPR DG D R SLALKLDY
Sbjct: 176 SLLRTAMRKGASEEEETTEERWVSYSEVVEEVMSRSGTPRCCGGGDGNDGRPSLALKLDY 235
Query: 704 EQVMEAWSDKGTLYVDGEPPQTVPDLHASADVFTGGGDSGSLWTVPEMETTERLWRGHRE 883
EQ+MEAWSDKGTLYVDGEPPQTVPDLHASAD F GG++G+LW VPEMETTERLWRGHRE
Sbjct: 236 EQIMEAWSDKGTLYVDGEPPQTVPDLHASADGFNDGGEAGNLWAVPEMETTERLWRGHRE 295
Query: 884 ASLLRYKEKRQNRLFSKRIRYEVRKLNAEKRPRVKGRFVKRDD 1012
ASLLRYKEKRQNRLFSKRIRY+VRKLNAEKRPRVKGRFVKR+D
Sbjct: 296 ASLLRYKEKRQNRLFSKRIRYQVRKLNAEKRPRVKGRFVKRED 338
>TAIR9_protein||AT1G73870.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:27779214-27780522 FORWARD
Length = 393
Score = 96 bits (237), Expect = 4e-020
Identities = 56/120 (46%), Positives = 73/120 (60%), Gaps = 9/120 (7%)
Frame = +2
Query: 665 KDRRRSLALKLDYEQVMEAWSDKGTLYVDGEPPQTVPDLHASADVFTGGGDSGSLWTVPE 844
KDR+ SL L+LDY V+ AW + G+ + G P+ + + GG + +
Sbjct: 271 KDRKTSLFLRLDYGAVISAWDNHGSPWKTGIKPECMLGGNTCLPHVVGGYEK---LMSSD 327
Query: 845 METTERLWR------GHREASLLRYKEKRQNRLFSKRIRYEVRKLNAEKRPRVKGRFVKR 1006
T + R G REA +LRYKEKR+ RLFSK+IRYEVRKLNAE+RPR+KGRFVKR
Sbjct: 328 GSVTRQQGRDGGGSDGEREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKR 387
>TAIR9_protein||AT1G25440.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:8933939-8935284 REVERSE
Length = 418
Score = 96 bits (237), Expect = 4e-020
Identities = 53/117 (45%), Positives = 72/117 (61%), Gaps = 3/117 (2%)
Frame = +2
Query: 665 KDRRRSLALKLDYEQVMEAWSDKGTLYVDGEPPQTVPDLH---ASADVFTGGGDSGSLWT 835
++ + L L+L+Y+ V+ W +G + GEPP+ D+ A + V GG +
Sbjct: 287 EEHKNVLMLRLNYDSVISTWGGQGPPWSSGEPPERDMDISGWPAFSMVENGGESTHQKQY 346
Query: 836 VPEMETTERLWRGHREASLLRYKEKRQNRLFSKRIRYEVRKLNAEKRPRVKGRFVKR 1006
V + G REA + RY+EKR+ RLFSK+IRYEVRKLNAEKRPR+KGRFVKR
Sbjct: 347 VGGCLPSSGFGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 403
>TAIR9_protein||AT1G68520.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:25709331-25710749 REVERSE
Length = 407
Score = 83 bits (203), Expect = 4e-016
Identities = 61/162 (37%), Positives = 82/162 (50%), Gaps = 20/162 (12%)
Frame = +2
Query: 545 KTAMRKGASKEEETTEERWVSYSEVVEEVMSRSGTPRPDG---KDRRRSLALKLDYEQVM 715
KT +G E+E +V++ VM G + + ++L L+LDYE V+
Sbjct: 250 KTTFDEGEEDEKE----------DVMKNVMEMGVNEMSGGIKEEKKEKALMLRLDYESVI 299
Query: 716 EAWSDKGTLYVDGEPPQTVPDLHASADVFTGGGDSGSLWTVPEMETTERLWRGH-----R 880
W +G + P + DL G+SG+ L G R
Sbjct: 300 STWGGQGIPWTARVPSEI--DLDMVCFPTHTMGESGAEAHHHNHFRGLGLHLGDAGDGGR 357
Query: 881 EASLLRYKEKRQNRLFSKRIRYEVRKLNAEKRPRVKGRFVKR 1006
EA + RY+EKR+ RLFSK+IRYEVRKLNAEKRPR+KGRFVKR
Sbjct: 358 EARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 399
>TAIR9_protein||AT1G07050.1 | Symbols: | CONSTANS-like protein-related |
chr1:2164327-2165133 REVERSE
Length = 196
Score = 80 bits (195), Expect = 3e-015
Identities = 39/56 (69%), Positives = 46/56 (82%)
Frame = +2
Query: 842 EMETTERLWRGHREASLLRYKEKRQNRLFSKRIRYEVRKLNAEKRPRVKGRFVKRD 1009
E+ E REAS+LRYKEKRQ+RLFSK+IRY+VRKLNA+KRPR KGRFVKR+
Sbjct: 139 EVPVIEEKRNMRREASVLRYKEKRQSRLFSKKIRYQVRKLNADKRPRFKGRFVKRE 194
>TAIR9_protein||AT4G25990.1 | Symbols: CIL | CIL | chr4:13191937-13193543
REVERSE
Length = 395
Score = 79 bits (192), Expect = 7e-015
Identities = 36/45 (80%), Positives = 44/45 (97%)
Frame = +2
Query: 872 GHREASLLRYKEKRQNRLFSKRIRYEVRKLNAEKRPRVKGRFVKR 1006
G REAS+LRYKEKR+NRLFSK+IRY+VRKLNA++RPR+KGRFV+R
Sbjct: 339 GMREASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRMKGRFVRR 383
>TAIR9_protein||AT5G57180.2 | Symbols: CIA2 | CIA2 (CHLOROPLAST IMPORT APPARATUS
2); transcription regulator | chr5:23168393-23170763 FORWARD
Length = 436
Score = 76 bits (186), Expect = 4e-014
Identities = 35/45 (77%), Positives = 43/45 (95%)
Frame = +2
Query: 872 GHREASLLRYKEKRQNRLFSKRIRYEVRKLNAEKRPRVKGRFVKR 1006
G REAS+LRYKEKR+ RLFSK+IRY+VRKLNA++RPR+KGRFV+R
Sbjct: 381 GMREASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVRR 425
>TAIR9_protein||AT1G49130.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:18174741-18175936 REVERSE
Length = 327
Score = 73 bits (178), Expect = 3e-013
Identities = 33/50 (66%), Positives = 43/50 (86%)
Frame = +2
Query: 857 ERLWRGHREASLLRYKEKRQNRLFSKRIRYEVRKLNAEKRPRVKGRFVKR 1006
E+ R REA + RY++KR+NRLF K+IRYEVRK+NA+KRPR+KGRFV+R
Sbjct: 271 EKRVRSEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRR 320
>TAIR9_protein||AT1G49130.2 | Symbols: | zinc finger (B-box type) family
protein | chr1:18174741-18175811 REVERSE
Length = 320
Score = 73 bits (178), Expect = 3e-013
Identities = 33/50 (66%), Positives = 43/50 (86%)
Frame = +2
Query: 857 ERLWRGHREASLLRYKEKRQNRLFSKRIRYEVRKLNAEKRPRVKGRFVKR 1006
E+ R REA + RY++KR+NRLF K+IRYEVRK+NA+KRPR+KGRFV+R
Sbjct: 264 EKRVRSEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRR 313
>TAIR9_protein||AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger (B-box type)
family protein | chr5:8589325-8590949 FORWARD
Length = 407
Score = 69 bits (166), Expect = 7e-012
Identities = 42/88 (47%), Positives = 49/88 (55%), Gaps = 14/88 (15%)
Frame = +2
Query: 770 VPDLHASADV-------FTGGGDSGSLWTVPEMETTERLWRGHREASLLRYKEKRQNRLF 928
VPD + ADV T G D G+ VP L REA ++RY+EKR+NR F
Sbjct: 303 VPDGGSVADVSYPYGGPATSGADPGTQRAVP-------LTSAEREARVMRYREKRKNRKF 355
Query: 929 SKRIRYEVRKLNAEKRPRVKGRFVKRDD 1012
K IRY RK AE RPR+KGRF KR D
Sbjct: 356 EKTIRYASRKAYAEMRPRIKGRFAKRTD 383
>TAIR9_protein||AT4G25990.2 | Symbols: CIL | CIL | chr4:13191937-13193543
REVERSE
Length = 410
Score = 68 bits (164), Expect = 1e-011
Identities = 31/39 (79%), Positives = 38/39 (97%)
Frame = +2
Query: 872 GHREASLLRYKEKRQNRLFSKRIRYEVRKLNAEKRPRVK 988
G REAS+LRYKEKR+NRLFSK+IRY+VRKLNA++RPR+K
Sbjct: 339 GMREASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRMK 377
>TAIR9_protein||AT5G57180.1 | Symbols: CIA2 | CIA2 (CHLOROPLAST IMPORT APPARATUS
2); transcription regulator | chr5:23168393-23170294 FORWARD
Length = 425
Score = 65 bits (158), Expect = 6e-011
Identities = 30/39 (76%), Positives = 37/39 (94%)
Frame = +2
Query: 872 GHREASLLRYKEKRQNRLFSKRIRYEVRKLNAEKRPRVK 988
G REAS+LRYKEKR+ RLFSK+IRY+VRKLNA++RPR+K
Sbjct: 381 GMREASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMK 419
>TAIR9_protein||AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONSTANS-LIKE 3);
protein binding / transcription factor/ zinc ion binding |
chr2:10566959-10567946 FORWARD
Length = 295
Score = 65 bits (156), Expect = 1e-010
Identities = 35/61 (57%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Frame = +2
Query: 842 EMETTE----RLWRGHREASLLRYKEKRQNRLFSKRIRYEVRKLNAEKRPRVKGRFVKRD 1009
EM TE +L REA +LRY+EKR+NR F K IRY RK AE RPR+KGRF KR
Sbjct: 213 EMTNTETPAVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRT 272
Query: 1010 D 1012
D
Sbjct: 273 D 273
>TAIR9_protein||AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger (B-box type)
family protein | chr5:23355573-23356729 FORWARD
Length = 356
Score = 62 bits (149), Expect = 7e-010
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = +2
Query: 878 REASLLRYKEKRQNRLFSKRIRYEVRKLNAEKRPRVKGRFVKRDD 1012
REA +LRY+EKR+NR F K IRY RK AE RPR+KGRF KR +
Sbjct: 285 REARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTE 329
>TAIR9_protein||AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 9); protein binding / transcription
regulator/ two-component response regulator | chr2:19233422-19234901
FORWARD
Length = 352
Score = 62 bits (148), Expect = 9e-010
Identities = 30/65 (46%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +2
Query: 812 GDSGSLWTVPEMETTERLW-RGHREASLLRYKEKRQNRLFSKRIRYEVRKLNAEKRPRVK 988
G S S E E+ ++ W R REA+L++++ KR++R F K++RY+ RK AE+RPRVK
Sbjct: 277 GQSSSTEKPKEEESAKQRWSRSQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVK 336
Query: 989 GRFVK 1003
G+FV+
Sbjct: 337 GQFVR 341
>TAIR9_protein||AT2G46670.1 | Symbols: | pseudo-response regulator, putative /
timing of CAB expression 1-like protein, putative |
chr2:19164589-19165233 REVERSE
Length = 184
Score = 62 bits (148), Expect = 9e-010
Identities = 30/65 (46%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +2
Query: 812 GDSGSLWTVPEMETTERLW-RGHREASLLRYKEKRQNRLFSKRIRYEVRKLNAEKRPRVK 988
G S S E E+ ++ W R REA+L++++ KR++R F K++RY+ RK AE+RPRVK
Sbjct: 109 GQSSSTEKPKEEESAKQRWSRSQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVK 168
Query: 989 GRFVK 1003
G+FV+
Sbjct: 169 GQFVR 173
>TAIR9_protein||AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 9); protein binding / transcription
regulator/ two-component response regulator | chr2:19232874-19234901
FORWARD
Length = 469
Score = 62 bits (148), Expect = 9e-010
Identities = 30/65 (46%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +2
Query: 812 GDSGSLWTVPEMETTERLW-RGHREASLLRYKEKRQNRLFSKRIRYEVRKLNAEKRPRVK 988
G S S E E+ ++ W R REA+L++++ KR++R F K++RY+ RK AE+RPRVK
Sbjct: 394 GQSSSTEKPKEEESAKQRWSRSQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVK 453
Query: 989 GRFVK 1003
G+FV+
Sbjct: 454 GQFVR 458
>TAIR9_protein||AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (constans-like 1);
transcription factor/ zinc ion binding | chr5:5176297-5177473 REVERSE
Length = 356
Score = 60 bits (144), Expect = 3e-009
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = +2
Query: 878 REASLLRYKEKRQNRLFSKRIRYEVRKLNAEKRPRVKGRFVKRDD 1012
REA +LRY+EK++ R F K IRY RK AEKRPR+KGRF K+ D
Sbjct: 286 REARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKD 330
>TAIR9_protein||AT3G02380.1 | Symbols: COL2 | COL2 (constans-like 2);
transcription factor/ zinc ion binding | chr3:487438-488624 REVERSE
Length = 348
Score = 60 bits (143), Expect = 3e-009
Identities = 29/56 (51%), Positives = 37/56 (66%)
Frame = +2
Query: 839 PEMETTERLWRGHREASLLRYKEKRQNRLFSKRIRYEVRKLNAEKRPRVKGRFVKR 1006
P + ++L REA +LRY+EK++ R F K IRY RK AE RPR+KGRF KR
Sbjct: 265 PPTQVVQQLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKR 320
>TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); transcription
factor/ transcription regulator/ zinc ion binding |
chr5:5171343-5172697 REVERSE
Length = 374
Score = 59 bits (141), Expect = 6e-009
Identities = 31/56 (55%), Positives = 37/56 (66%)
Frame = +2
Query: 842 EMETTERLWRGHREASLLRYKEKRQNRLFSKRIRYEVRKLNAEKRPRVKGRFVKRD 1009
+M T +L REA +LRY+EKR+ R F K IRY RK AE RPRV GRF KR+
Sbjct: 294 QMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKRE 349
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,660,019,295
Number of Sequences: 33410
Number of Extensions: 9660019295
Number of Successful Extensions: 322770282
Number of sequences better than 0.0: 0
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