BLASTX 7.6.2
Query= UN18596 /QuerySize=964
(963 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G55300.1 | Symbols: TAF7 | TAF7 (TBP-ASSOCIATE... 333 1e-091
TAIR9_protein||AT1G55300.2 | Symbols: TAF7 | TAF7 (TBP-ASSOCIATE... 277 1e-074
>TAIR9_protein||AT1G55300.1 | Symbols: TAF7 | TAF7 (TBP-ASSOCIATED FACTOR 7);
general RNA polymerase II transcription factor | chr1:20628170-20629490
REVERSE
Length = 204
Score = 333 bits (852), Expect = 1e-091
Identities = 180/214 (84%), Positives = 189/214 (88%), Gaps = 10/214 (4%)
Frame = +3
Query: 90 MEEQFILRVPPSVSERIDRLLSDEASTSDEIPLDLCFSEDGRSGTFMIGNEEFPASLLDL 269
MEEQFILRVPPSVSERIDRLLS++ASTSDEIPLDL FSEDGR+GTFMIGN+EFPASLLDL
Sbjct: 1 MEEQFILRVPPSVSERIDRLLSEDASTSDEIPLDLFFSEDGRNGTFMIGNDEFPASLLDL 60
Query: 270 PAVVESFKTYDDSALVKTADIGQMIMVREPGDPSPNTVEYRHGLTPPMKDARKRRFRREP 449
PAVVESFKTYDD ALVKTADIGQMIMVREPGDP+PNTVEYRHGLTPPMKDARKRRFRREP
Sbjct: 61 PAVVESFKTYDDCALVKTADIGQMIMVREPGDPAPNTVEYRHGLTPPMKDARKRRFRREP 120
Query: 450 DLNPELVQRVERDLLNILSGGTIGNVNEQQEETVANENTSDNNANKKVSSSSPADAPGEK 629
DLNPELVQRVERDLLNILSGGT+ NV+E QEE NEN S NA+KKVSSSSP P EK
Sbjct: 121 DLNPELVQRVERDLLNILSGGTVENVHE-QEEPATNENAS--NASKKVSSSSP--TPVEK 175
Query: 630 PEEALETATNNNNNNVTEAEPERSESEDSDDSM* 731
P EA ET T +N T EPERSESEDSDDSM*
Sbjct: 176 P-EAPETGT----SNPTGVEPERSESEDSDDSM* 204
>TAIR9_protein||AT1G55300.2 | Symbols: TAF7 | TAF7 (TBP-ASSOCIATED FACTOR 7);
general RNA polymerase II transcription factor | chr1:20628154-20629490
REVERSE
Length = 240
Score = 277 bits (707), Expect = 1e-074
Identities = 137/147 (93%), Positives = 144/147 (97%)
Frame = +3
Query: 90 MEEQFILRVPPSVSERIDRLLSDEASTSDEIPLDLCFSEDGRSGTFMIGNEEFPASLLDL 269
MEEQFILRVPPSVSERIDRLLS++ASTSDEIPLDL FSEDGR+GTFMIGN+EFPASLLDL
Sbjct: 1 MEEQFILRVPPSVSERIDRLLSEDASTSDEIPLDLFFSEDGRNGTFMIGNDEFPASLLDL 60
Query: 270 PAVVESFKTYDDSALVKTADIGQMIMVREPGDPSPNTVEYRHGLTPPMKDARKRRFRREP 449
PAVVESFKTYDD ALVKTADIGQMIMVREPGDP+PNTVEYRHGLTPPMKDARKRRFRREP
Sbjct: 61 PAVVESFKTYDDCALVKTADIGQMIMVREPGDPAPNTVEYRHGLTPPMKDARKRRFRREP 120
Query: 450 DLNPELVQRVERDLLNILSGGTIGNVN 530
DLNPELVQRVERDLLNILSGGT+ NV+
Sbjct: 121 DLNPELVQRVERDLLNILSGGTVENVS 147
Score = 70 bits (169), Expect = 2e-012
Identities = 46/71 (64%), Positives = 53/71 (74%), Gaps = 9/71 (12%)
Frame = +1
Query: 535 SKRKQLRTRILVIIMQTRKCLLLHLLMHLVKSLKKLLRQRLIIIIIM*PKLSRREVNQKI 714
SKR QLRTR+LV MQ RK LLLHL HL+KSL KLLRQ L+I +L+RREVNQKI
Sbjct: 179 SKRNQLRTRMLV--MQVRKYLLLHL--HLLKSL-KLLRQALVIQ----QELNRREVNQKI 229
Query: 715 LMIQCERLFM* 747
LMIQCE + +*
Sbjct: 230 LMIQCEFIII* 240
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,660,019,295
Number of Sequences: 33410
Number of Extensions: 9660019295
Number of Successful Extensions: 322770282
Number of sequences better than 0.0: 0
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