Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN18633


BLASTX 7.6.2

Query= UN18633 /QuerySize=1259
        (1258 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT4G21450.1 | Symbols:  | vesicle-associated memb...    538   3e-153
TAIR9_protein||AT4G05060.1 | Symbols:  | vesicle-associated memb...    389   2e-108
TAIR9_protein||AT4G21450.2 | Symbols:  | vesicle-associated memb...    379   3e-105
TAIR9_protein||AT5G54110.1 | Symbols: ATMAMI | ATMAMI (ARABIDOPS...    322   5e-088
TAIR9_protein||AT3G10810.1 | Symbols:  | zinc finger (C3HC4-type...     66   5e-011

>TAIR9_protein||AT4G21450.1 | Symbols:  | vesicle-associated membrane family
        protein / VAMP family protein | chr4:11426136-11428125 FORWARD

          Length = 296

 Score =  538 bits (1386), Expect = 3e-153
 Identities = 269/297 (90%), Positives = 275/297 (92%), Gaps = 8/297 (2%)
 Frame = -3

Query: 1136 MTMTTEEKPTTDGR-GWGIFKIPFRNS--HGNASSSAATSPFPSGASSSSSSHHIHNHHH 966
            MTM TEEKPT+DG+ GWG FKIPFRNS  H NA+SSAATSPFPSGASSSS+S H+HNHH 
Sbjct:    1 MTM-TEEKPTSDGKGGWGFFKIPFRNSSGHRNAASSAATSPFPSGASSSSTSSHLHNHHQ 59

Query:  965 HHHHHHHHG----GYNGPHGDGSGQNQHPTPSPSVSSVAKSLLPVKRRLKLDPSEKLYFP 798
            HHH HHH      GYNGPHGDGSGQNQHPTPSPSVSSVAKS LP KRRLKLDPSEKLYFP
Sbjct:   60 HHHQHHHQHHHQLGYNGPHGDGSGQNQHPTPSPSVSSVAKSFLPTKRRLKLDPSEKLYFP 119

Query:  797 YEPGKQVRSAIKIKNTSKSHVAFKFQTTEPKSCFMRPPGAILAPGETIIATVFKFVEPPE 618
            YEPGKQVRSAIKIKNTSKSHVAFKFQTT PKSCFMRPPGAILAPGETIIATVFKFVEPPE
Sbjct:  120 YEPGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGETIIATVFKFVEPPE 179

Query:  617 NNEKPMDQRSRVKFKIMSLKVKGPMDYVPELFDEQKDDVSKEQILRVIFLDPERPNPALE 438
            NNEKPMDQRSRVKFKIMSLKVKGPMDYVPELFDEQKDDVSKEQILRVIFLDPER NPALE
Sbjct:  180 NNEKPMDQRSRVKFKIMSLKVKGPMDYVPELFDEQKDDVSKEQILRVIFLDPERSNPALE 239

Query:  437 KLKRQLAEADAAVETRKKPPEETGPKMIGEGLVIDEWKERRERYLAQQQGEGVESV* 267
            KLKRQLAEADAAVE RKKPPEETGPKMIGEGLVIDEWKERRERYLAQQQGEG +SV*
Sbjct:  240 KLKRQLAEADAAVEARKKPPEETGPKMIGEGLVIDEWKERRERYLAQQQGEGADSV* 296

>TAIR9_protein||AT4G05060.1 | Symbols:  | vesicle-associated membrane family
        protein / VAMP family protein | chr4:2590245-2592000 REVERSE

          Length = 288

 Score =  389 bits (998), Expect = 2e-108
 Identities = 201/289 (69%), Positives = 232/289 (80%), Gaps = 7/289 (2%)
 Frame = -3

Query: 1124 TEEKPTTDGRGWGIFKIPFRNSHGNASSSAATSPFPSGASSSSSSHHIHNHHHHHHHHHH 945
            TE+K  +DGR WG FK+PFRNS+  A S++++S   + +SS +SSH   N+ H   H  +
Sbjct:    4 TEDKSDSDGRRWGKFKLPFRNSNSQAPSASSSSSMATSSSSVTSSHLNQNYIHQSRHFQY 63

Query:  944 HGGYNGPHGDGSGQNQHPTPS--PSVSSVAKSLLPVKRRLKLDPSEKLYFPYEPGKQVRS 771
            HG    P  +G GQN H + +  PS+SSVA+SLLP KRRLKLDPS KLYFPYEPGKQVRS
Sbjct:   64 HG---PPVVEGLGQNHHQSAATIPSMSSVARSLLPTKRRLKLDPSAKLYFPYEPGKQVRS 120

Query:  770 AIKIKNTSKSHVAFKFQTTEPKSCFMRPPGAILAPGETIIATVFKFVEPPENNEKPMDQR 591
            AIKIKNTSKSHVAFKFQTT PKSCFMRP GAILAPGE IIATVFKFVEPPENNEKPM+Q+
Sbjct:  121 AIKIKNTSKSHVAFKFQTTVPKSCFMRPAGAILAPGEEIIATVFKFVEPPENNEKPMEQK 180

Query:  590 SRVKFKIMSLKVKGPMDYVPELFDEQKDDVSKEQILRVIFLDPERPNPALEKLKRQLAEA 411
            S VKFKIMSLK+K P DY+PELF+EQKD VS+EQ++RV+FLDPE PN  +EKLK QLAEA
Sbjct:  181 SGVKFKIMSLKMKVPTDYMPELFEEQKDHVSEEQVMRVVFLDPENPNSMMEKLKSQLAEA 240

Query:  410 DAAVETRKKPPEE-TGPKMIGEGLVIDEWKERRERYLAQQQGEGVESV* 267
            DAA E RKK  E   GPK IGEGLVIDEWK+RRERYLAQQQG GV++ *
Sbjct:  241 DAADEARKKASEGIVGPKPIGEGLVIDEWKQRRERYLAQQQG-GVDAA* 288

>TAIR9_protein||AT4G21450.2 | Symbols:  | vesicle-associated membrane family
        protein / VAMP family protein | chr4:11426136-11427439 FORWARD

          Length = 213

 Score =  379 bits (971), Expect = 3e-105
 Identities = 188/211 (89%), Positives = 193/211 (91%), Gaps = 8/211 (3%)
 Frame = -3

Query: 1136 MTMTTEEKPTTDGR-GWGIFKIPFRNS--HGNASSSAATSPFPSGASSSSSSHHIHNHHH 966
            MTM TEEKPT+DG+ GWG FKIPFRNS  H NA+SSAATSPFPSGASSSS+S H+HNHH 
Sbjct:    1 MTM-TEEKPTSDGKGGWGFFKIPFRNSSGHRNAASSAATSPFPSGASSSSTSSHLHNHHQ 59

Query:  965 HHHHHHHHG----GYNGPHGDGSGQNQHPTPSPSVSSVAKSLLPVKRRLKLDPSEKLYFP 798
            HHH HHH      GYNGPHGDGSGQNQHPTPSPSVSSVAKS LP KRRLKLDPSEKLYFP
Sbjct:   60 HHHQHHHQHHHQLGYNGPHGDGSGQNQHPTPSPSVSSVAKSFLPTKRRLKLDPSEKLYFP 119

Query:  797 YEPGKQVRSAIKIKNTSKSHVAFKFQTTEPKSCFMRPPGAILAPGETIIATVFKFVEPPE 618
            YEPGKQVRSAIKIKNTSKSHVAFKFQTT PKSCFMRPPGAILAPGETIIATVFKFVEPPE
Sbjct:  120 YEPGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGETIIATVFKFVEPPE 179

Query:  617 NNEKPMDQRSRVKFKIMSLKVKGPMDYVPEL 525
            NNEKPMDQRSRVKFKIMSLKVKGPMDYVPEL
Sbjct:  180 NNEKPMDQRSRVKFKIMSLKVKGPMDYVPEL 210

>TAIR9_protein||AT5G54110.1 | Symbols: ATMAMI | ATMAMI (ARABIDOPSIS THALIANA
        MEMBRANE-ASSOCIATED MANNITOL-INDUCED); structural molecule |
        chr5:21958356-21960367 FORWARD

          Length = 267

 Score =  322 bits (823), Expect = 5e-088
 Identities = 159/224 (70%), Positives = 191/224 (85%), Gaps = 2/224 (0%)
 Frame = -3

Query: 935 YNGPHGDGSGQNQHPTPSP-SVSSVAKSLLPVKRRLKLDPSEKLYFPYEPGKQVRSAIKI 759
           Y   HG+ +      +  P ++SSVA+SLLP +RRL+LDPS  LYFPYEPGKQVRSAIK+
Sbjct:  42 YRSRHGNRNTDISAVSKPPLTMSSVARSLLPARRRLRLDPSSYLYFPYEPGKQVRSAIKL 101

Query: 758 KNTSKSHVAFKFQTTEPKSCFMRPPGAILAPGETIIATVFKFVEPPENNEK-PMDQRSRV 582
           KNTSKSH AFKFQTT PKSC+MRPPG +LAPGE++ ATVFKFVE PENNEK P++Q+S+V
Sbjct: 102 KNTSKSHTAFKFQTTAPKSCYMRPPGGVLAPGESVFATVFKFVEHPENNEKQPLNQKSKV 161

Query: 581 KFKIMSLKVKGPMDYVPELFDEQKDDVSKEQILRVIFLDPERPNPALEKLKRQLAEADAA 402
           KFKIMSLKVK  ++YVPELFDEQKD V+ EQ+LRVIF+D +RP+ ALEKLKRQL EA+AA
Sbjct: 162 KFKIMSLKVKPGVEYVPELFDEQKDQVAVEQVLRVIFIDADRPSAALEKLKRQLDEAEAA 221

Query: 401 VETRKKPPEETGPKMIGEGLVIDEWKERRERYLAQQQGEGVESV 270
           VE RKKPP ETGP+++GEGLVIDEWKERRE+YLA+QQ E V+S+
Sbjct: 222 VEARKKPPPETGPRVVGEGLVIDEWKERREKYLARQQVESVDSL 265

>TAIR9_protein||AT3G10810.1 | Symbols:  | zinc finger (C3HC4-type RING finger)
        family protein | chr3:3381848-3384227 REVERSE

          Length = 497

 Score =  66 bits (159), Expect = 5e-011
 Identities = 38/92 (41%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
 Frame = -3

Query: 1052 NASSSAATSPFPSGASSSSSSHHIHNHHHHHHHHHHHGGYNGPHGDGSGQNQHPTPSPSV 873
            N+S S+  SP PS  S  S  HH H+HHHHHHHHHHH  ++  H      N  P  +P V
Sbjct:  312 NSSDSSTKSPSPS-PSPHSKHHHHHHHHHHHHHHHHHNHHHHHH-----HNLSPKMAPEV 365

Query:  872 SSVAKSLLPVKRRLKLDPSEKLYFPYEPGKQV 777
            S VA S  P + R +   +     P  PG +V
Sbjct:  366 SPVA-SPAPHRSRKRAPSAPP---PCNPGNRV 393

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,702,749,623
Number of Sequences: 33410
Number of Extensions: 9702749623
Number of Successful Extensions: 322780601
Number of sequences better than 0.0: 0