BLASTX 7.6.2
Query= UN18636 /QuerySize=709
(708 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G23740.1 | Symbols: RPS11-BETA | RPS11-BETA (R... 314 4e-086
TAIR9_protein||AT3G48930.1 | Symbols: EMB1080 | EMB1080 (embryo ... 300 9e-082
TAIR9_protein||AT4G30800.1 | Symbols: | 40S ribosomal protein S... 298 3e-081
>TAIR9_protein||AT5G23740.1 | Symbols: RPS11-BETA | RPS11-BETA (RIBOSOMAL
PROTEIN S11-BETA); structural constituent of ribosome |
chr5:8008251-8009330 REVERSE
Length = 160
Score = 314 bits (803), Expect = 4e-086
Identities = 153/160 (95%), Positives = 154/160 (96%)
Frame = -1
Query: 627 MAEQTEKAFLKQPKVFLSSKISGKGKRPGKGGNRFVKNIGLGFKTPRDAIQGTYIDSKCP 448
MAEQTEKAFLKQPKVFLSSKISGKGKRPGKGGNRF KNIGLGFKTPR+AI G YIDSKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKISGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYIDSKCP 60
Query: 447 FTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 268
FTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120
Query: 267 GDHVIIGQCRPLSKTVRFNVLKVIPAGASAFAKKAFTGA* 148
GDHVIIGQCRPLSKTVRFNVLKVIPAGASAF KKAFTG *
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGASAFGKKAFTGV* 160
>TAIR9_protein||AT3G48930.1 | Symbols: EMB1080 | EMB1080 (embryo defective
1080); structural constituent of ribosome | chr3:18141017-18142189
REVERSE
Length = 161
Score = 300 bits (766), Expect = 9e-082
Identities = 146/159 (91%), Positives = 152/159 (95%), Gaps = 1/159 (0%)
Frame = -1
Query: 627 MAEQTEKAFLKQPKVFLSSKISGKGKRPGKGGNRFVKNIGLGFKTPRDAIQGTYIDSKCP 448
MAEQTEKAFLKQPKVFLSSK SGKGKRPGKGGNRF KNIGLGFKTPR+AI G Y+D KCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYVDKKCP 60
Query: 447 FTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 268
FTGTVSIRGRILAGTCHSAKMQRTIIVRR+YLHFVKKYQRYEKRHSNIPAHVSPCFRVKE
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120
Query: 267 GDHVIIGQCRPLSKTVRFNVLKVIPAG-ASAFAKKAFTG 154
GDH+IIGQCRPLSKTVRFNVLKVIPAG +S+F KKAFTG
Sbjct: 121 GDHIIIGQCRPLSKTVRFNVLKVIPAGSSSSFGKKAFTG 159
>TAIR9_protein||AT4G30800.1 | Symbols: | 40S ribosomal protein S11 (RPS11B) |
chr4:15001216-15002392 FORWARD
Length = 160
Score = 298 bits (761), Expect = 3e-081
Identities = 144/158 (91%), Positives = 151/158 (95%)
Frame = -1
Query: 627 MAEQTEKAFLKQPKVFLSSKISGKGKRPGKGGNRFVKNIGLGFKTPRDAIQGTYIDSKCP 448
MAEQTEKAFLKQPKVFLSSK SGKGKRPGKGGNRF KNIGLGFKTPR+AI+GTYID KCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIEGTYIDQKCP 60
Query: 447 FTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 268
FTGTVSIRGRIL+GTCHSAKMQRTIIVRR+YLHFVKKY+RYEKRHSNIPAHVSPCFRVKE
Sbjct: 61 FTGTVSIRGRILSGTCHSAKMQRTIIVRRDYLHFVKKYRRYEKRHSNIPAHVSPCFRVKE 120
Query: 267 GDHVIIGQCRPLSKTVRFNVLKVIPAGASAFAKKAFTG 154
GD V IGQCRPLSKTVRFNVLKVIPAG+S+ KKAFTG
Sbjct: 121 GDRVTIGQCRPLSKTVRFNVLKVIPAGSSSIGKKAFTG 158
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,702,749,623
Number of Sequences: 33410
Number of Extensions: 9702749623
Number of Successful Extensions: 322780601
Number of sequences better than 0.0: 0
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