BLASTX 7.6.2
Query= UN18644 /QuerySize=1134
(1133 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G22150.1 | Symbols: PUX3 | PUX3; protein bindi... 459 2e-129
TAIR9_protein||AT4G04210.1 | Symbols: PUX4 | PUX4; protein bindi... 419 1e-117
TAIR9_protein||AT4G15410.1 | Symbols: PUX5 | PUX5 (Arabidopsis t... 288 5e-078
TAIR9_protein||AT3G21660.1 | Symbols: | UBX domain-containing p... 72 8e-013
>TAIR9_protein||AT4G22150.1 | Symbols: PUX3 | PUX3; protein binding |
chr4:11731272-11732800 REVERSE
Length = 368
Score = 459 bits (1180), Expect = 2e-129
Identities = 234/268 (87%), Positives = 246/268 (91%), Gaps = 3/268 (1%)
Frame = +1
Query: 49 EMSSKDKQPSKPSGGRTSGIRTLSDLNRRSGPDSDSDSDGPQEYYTGGEKSGMLVQDPSK 228
+MSSKDK+ SKP+ GRT GIRTLSDLNRRS PDSDSDSDGPQEY+TGGEKSGMLVQDP+K
Sbjct: 65 DMSSKDKKLSKPTSGRTGGIRTLSDLNRRSEPDSDSDSDGPQEYFTGGEKSGMLVQDPTK 124
Query: 229 EPKHDDVDEIFNQARQLGAVEGPLERPPSSSRSFTGTGRLLSGESVPTALQPPEPVIHSI 408
EPKHDDVDEIFNQARQLGAVEGPLE PSSSRSFTGTGRLLSGESVPTALQ PEPVIH+I
Sbjct: 125 EPKHDDVDEIFNQARQLGAVEGPLEH-PSSSRSFTGTGRLLSGESVPTALQQPEPVIHNI 183
Query: 409 VFWSNGFTVDDGPLRKLDDPENESFLDSIRKSECPKELEPADKRAPVHVNLMRRDEICPE 588
+FWSNGFTVDDGPLRKLDDPEN SFLDSIRKSECPKELEP DKRAPVHVNLMRRDE CPE
Sbjct: 184 IFWSNGFTVDDGPLRKLDDPENASFLDSIRKSECPKELEPVDKRAPVHVNLMRRDEKCPE 243
Query: 589 REKPTVAFQGVGRTLGGGASSSTPQSLSNPTDVAAAPSPSQSPVVVDETLPSTSIQLRLS 768
+EK V+FQGVGRTL GGASSST S SN TDVAA SP QS +VVDETLPSTSIQLRL+
Sbjct: 244 KEKLKVSFQGVGRTL-GGASSSTASSQSNLTDVAAVQSPLQS-LVVDETLPSTSIQLRLA 301
Query: 769 DGTRMVAKFNNHHTVNDIRAFIDFSRPG 852
DGTRMVAKFNNHHTVNDIR FI+FSRPG
Sbjct: 302 DGTRMVAKFNNHHTVNDIRGFIEFSRPG 329
Score = 68 bits (165), Expect = 8e-012
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +3
Query: 852 DPINYSLQVMGFPPKPLTDPFQTIDEAGLANSVVIQKF* 968
+P NY+LQVMGFPPKPLTDP QTI++AGLA+SVVIQKF*
Sbjct: 330 NPNNYTLQVMGFPPKPLTDPSQTIEQAGLASSVVIQKF* 368
>TAIR9_protein||AT4G04210.1 | Symbols: PUX4 | PUX4; protein binding |
chr4:2030391-2031670 FORWARD
Length = 304
Score = 419 bits (1077), Expect = 1e-117
Identities = 216/282 (76%), Positives = 242/282 (85%), Gaps = 10/282 (3%)
Frame = +1
Query: 52 MSSKDKQPSKPSGGRTSGIRTLSDLNRRSGPDSDSDSDGPQEYYTGGEKSGMLVQDPSKE 231
MSSKDK+PSKPS R GIRTLSDLNRRSGPDSDSDSDGPQEYYTGGEKSGMLVQDPSK+
Sbjct: 1 MSSKDKKPSKPSSSR-GGIRTLSDLNRRSGPDSDSDSDGPQEYYTGGEKSGMLVQDPSKK 59
Query: 232 PKHDDVDEIFNQARQLGAVEGPLERPPSSSRSFTGTGRLLSGESVPTALQPPEPVIHSIV 411
DDVDEIFNQARQLGAVEGPLE PP SSRSFTGTGRLLSGE+VPT Q PEPV+H+IV
Sbjct: 60 ---DDVDEIFNQARQLGAVEGPLE-PPPSSRSFTGTGRLLSGENVPTGNQQPEPVVHNIV 115
Query: 412 FWSNGFTVDDGPLRKLDDPENESFLDSIRKSECPKELEPADKRAPVHVNLMRRDEICPER 591
FWSNGFT+DDGPLRKLDDPEN SFL+SIRKSECPKELEPAD+RAPVHVNLMR++E CPER
Sbjct: 116 FWSNGFTIDDGPLRKLDDPENASFLESIRKSECPKELEPADRRAPVHVNLMRKEEKCPER 175
Query: 592 EKPTVAFQGVGRTLGG---GASSSTPQSL-SNPTDVAAAPSPSQSPVVVDETLPSTSIQL 759
+K V+FQGVGRTLGG G+ SS+P + S P + P+PSQS +V+DET+P+TSIQL
Sbjct: 176 QKRRVSFQGVGRTLGGSNEGSGSSSPVAPDSAPIPIQTEPAPSQS-LVIDETVPTTSIQL 234
Query: 760 RLSDGTRMVAKFNNHHTVNDIRAFIDFSRPGIQSTTAFRSWG 885
RL+DGTR+VAKFN+HHTVNDIR FID SRPG ++ G
Sbjct: 235 RLADGTRLVAKFNHHHTVNDIRGFIDSSRPGASLNYQLQTMG 276
Score = 64 bits (153), Expect = 2e-010
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +3
Query: 858 INYSLQVMGFPPKPLTDPFQTIDEAGLANSVVIQKF* 968
+NY LQ MGFPPKPLTD QTI+EAGLANSVV+QKF*
Sbjct: 268 LNYQLQTMGFPPKPLTDLTQTIEEAGLANSVVLQKF* 304
>TAIR9_protein||AT4G15410.1 | Symbols: PUX5 | PUX5 (Arabidopsis thaliana
serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B
prime gamma); protein binding | chr4:8814868-8816596 FORWARD
Length = 422
Score = 288 bits (736), Expect = 5e-078
Identities = 159/285 (55%), Positives = 196/285 (68%), Gaps = 21/285 (7%)
Frame = +1
Query: 40 REREMSSKDKQPSKPSGGRTS-------GIRTLSDLNRRSGPDSDSDSDGPQEYYTGGEK 198
R R + ++K+ PSG R+S IRT +DLNR SDSD EYYTGG+K
Sbjct: 106 RSRGGAGENKETENPSGIRSSRSRQHAGNIRTFADLNRSPADGEGSDSDEANEYYTGGQK 165
Query: 199 SGMLVQDPSKEPKHDDVDEIFNQARQLGAVEGPLERPPSSSRSFTGTGRLLSGESVPTAL 378
SGM+VQDP K DVDE+F+QARQ AV+ P+E S+S SFTG RLLSGE+V ++
Sbjct: 166 SGMMVQDPKKV---KDVDELFDQARQ-SAVDRPVEPSRSASTSFTGAARLLSGEAVSSSP 221
Query: 379 Q-----PPEPVIHSIVFWSNGFTVDDGPLRKLDDPENESFLDSIRKSECPKELEPADKRA 543
Q P+ ++H+I FW NGFTV+DGPLR DPEN +F++SI +SECP ELEPADK+
Sbjct: 222 QQQQQEQPQRIMHTITFWLNGFTVNDGPLRGFSDPENAAFMNSISRSECPSELEPADKKI 281
Query: 544 PVHVNLMRRDEICPEREKPTVAFQGVGRTLG--GGASSSTPQSLSNPTDVAAAPSPSQSP 717
PVHV+L+RR E E KP FQGVGRTLG G SSS PQ+ S P +VA APS
Sbjct: 282 PVHVDLVRRGENFTEPPKPKNPFQGVGRTLGASGSGSSSAPQASSAPMNVAPAPSRG--- 338
Query: 718 VVVDETLPSTSIQLRLSDGTRMVAKFNNHHTVNDIRAFIDFSRPG 852
+VVD P+TSIQLRL+DGTR+V++FNNHHTV D+R FID SRPG
Sbjct: 339 LVVDPAAPTTSIQLRLADGTRLVSRFNNHHTVRDVRGFIDASRPG 383
Score = 50 bits (119), Expect = 2e-006
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = +3
Query: 864 YSLQVMGFPPKPLTDPFQTIDEAGLANSVVIQKF* 968
Y L MGFPPK LT+ QTI++AG+AN+VVIQKF*
Sbjct: 388 YQLLTMGFPPKQLTELDQTIEQAGIANAVVIQKF* 422
>TAIR9_protein||AT3G21660.1 | Symbols: | UBX domain-containing protein |
chr3:7624495-7626654 REVERSE
Length = 436
Score = 72 bits (174), Expect = 8e-013
Identities = 38/75 (50%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
Frame = +1
Query: 625 RTLGGGASSSTPQSLSNPTDVAAAPSPSQSPVVVDETLPSTSIQLRLSDGTRMVAKFNNH 804
+TL G S+ST L+ PS S +VVD P+TSIQL L+D TR+V +FN H
Sbjct: 328 QTLAGSESTSTEPPLT------TTQPPSMSSLVVDPAAPTTSIQLILADSTRIVTQFNTH 381
Query: 805 HTVNDIRAFIDFSRP 849
HT+ DIR FID SRP
Sbjct: 382 HTIRDIRCFIDTSRP 396
Score = 69 bits (166), Expect = 6e-012
Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 13/95 (13%)
Frame = +1
Query: 298 LERPPSSSRSFTGTGRLLSGESVPTAL--QPPEPVIHSIVFWSNGFTVDDGPLRKLDDPE 471
+ERP SSRS +S E+V + L +P + H++ WSNGFTVDD L+ LDDPE
Sbjct: 124 IERPEQSSRS-------MSEETVSSELEEEPQKVFTHTVTSWSNGFTVDDSSLKTLDDPE 176
Query: 472 NESFLDSIRKSECPKELEPADKRAPVHVNLMRRDE 576
N +FL+ I E P+EL + V V ++ R+E
Sbjct: 177 NATFLEIISSMESPREL----GQVRVQVKIISREE 207
Score = 57 bits (137), Expect = 1e-008
Identities = 29/74 (39%), Positives = 40/74 (54%)
Frame = +1
Query: 268 ARQLGAVEGPLERPPSSSRSFTGTGRLLSGESVPTALQPPEPVIHSIVFWSNGFTVDDGP 447
A + A E +ER SS+ +G + QP E V +++ W NGFTVDD P
Sbjct: 227 ALAMRAKESAIERSEQSSKVLSGETDSAELQEQQQEDQPYEVVTYTVTIWRNGFTVDDDP 286
Query: 448 LRKLDDPENESFLD 489
+ LDDPEN +FL+
Sbjct: 287 FKSLDDPENAAFLE 300
Score = 49 bits (114), Expect = 7e-006
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 861 NYSLQVMGFPPKPLTDPFQTIDEAGLANSVVIQKF* 968
+Y L +MG PP PL+D QTI++AG+ANSV++QKF*
Sbjct: 401 DYQLLIMGSPPTPLSDFDQTIEKAGIANSVLVQKF* 436
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,702,749,623
Number of Sequences: 33410
Number of Extensions: 9702749623
Number of Successful Extensions: 322780601
Number of sequences better than 0.0: 0
|
