BLASTX 7.6.2
Query= UN18663 /QuerySize=1224
(1223 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297827935|ref|XP_002881850.1| predicted protein [Arabidopsis ... 244 3e-062
gi|297849284|ref|XP_002892523.1| hypothetical protein ARALYDRAFT... 242 9e-062
gi|297827931|ref|XP_002881848.1| hypothetical protein ARALYDRAFT... 226 7e-057
gi|297827929|ref|XP_002881847.1| hypothetical protein ARALYDRAFT... 215 1e-053
gi|297837017|ref|XP_002886390.1| hypothetical protein ARALYDRAFT... 211 2e-052
gi|4567322|gb|AAD23733.1| hypothetical protein [Arabidopsis thal... 201 2e-049
gi|334184872|ref|NP_181774.2| TRAF-like family protein [Arabidop... 201 2e-049
gi|334184874|ref|NP_001189731.1| TRAF-like family protein [Arabi... 201 2e-049
gi|26451189|dbj|BAC42698.1| unknown protein [Arabidopsis thaliana] 200 4e-049
gi|297827939|ref|XP_002881852.1| hypothetical protein ARALYDRAFT... 163 6e-038
gi|15227947|ref|NP_181776.1| TRAF-like family protein [Arabidops... 138 3e-030
gi|297827933|ref|XP_002881849.1| predicted protein [Arabidopsis ... 134 5e-029
gi|297824211|ref|XP_002879988.1| predicted protein [Arabidopsis ... 126 1e-026
gi|297827937|ref|XP_002881851.1| hypothetical protein ARALYDRAFT... 124 4e-026
gi|15227946|ref|NP_181775.1| TRAF-like family protein [Arabidops... 116 1e-023
>gi|297827935|ref|XP_002881850.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 244 bits (621), Expect = 3e-062
Identities = 132/282 (46%), Positives = 187/282 (66%), Gaps = 5/282 (1%)
Frame = +2
Query: 110 DLQMEDTLTWEIDNFSERNDGIRTADFSSGGCEWLVCVYPKGQSGSDHLSLFLHVANCDS 289
++ ++ T +W+I+NFSER I + FSSGGCEW V ++PKG D+LSL+L VAN S
Sbjct: 2 EIDLQSTFSWKIENFSERKFPITSTAFSSGGCEWYVLIHPKGDGFDDYLSLYLCVANPKS 61
Query: 290 LMLGWKRRASYSFVLLNLSGKELFRTLEEKTCIVFCNEHKSWGYTEVLPLSTKLQEKGFL 469
L GWKRRAS +F++LN SGKE+ RT E +F E WG+ LPL TKLQ+K L
Sbjct: 62 LQPGWKRRASLNFIILNQSGKEVHRTSERYG--LFGAEIPGWGFRTALPL-TKLQDKELL 118
Query: 470 EKDTLIMKIYIKVFEVVHQGKSTENEMLDFCGFQIPIPQYTLLKETVLRKPDFEIYFETE 649
E +TLI+++YIKV EVVH+G T +MLDF GF + Q T + + P+F + +
Sbjct: 119 ENNTLIIEVYIKVTEVVHEGDETRKDMLDFRGFNVLSSQITSVSHIFAKYPNFAADIKPK 178
Query: 650 KQVLKTKY-RTVLRILKTLSKPPQSLSLAELGKAQSELNVLEEATGFKLEWFNSKIEQLS 826
+ +KT Y + +L ++KT +KPP+S S EL KA S L L E GFKL+W SK++++S
Sbjct: 179 SKAVKTAYLKILLGLIKTANKPPESFSETELIKAYSSLIDLME-VGFKLDWLKSKLDEVS 237
Query: 827 VECKKATLSDGSRVGELDDRVRNVELTLWDLKAELDKDKIKS 952
+E K +D +RV EL+++V+N+EL L +LK ELDK+K +S
Sbjct: 238 LERKIKVDADAARVQELEEKVKNLELMLSNLKVELDKEKARS 279
>gi|297849284|ref|XP_002892523.1| hypothetical protein ARALYDRAFT_334257
[Arabidopsis lyrata subsp. lyrata]
Length = 305
Score = 242 bits (617), Expect = 9e-062
Identities = 139/293 (47%), Positives = 194/293 (66%), Gaps = 10/293 (3%)
Frame = +2
Query: 116 QMEDTLTWEIDNFSERN-DGIRTADFSSGGCEWLVCVYPKGQSGSD-HLSLFLHVANCDS 289
+++ + +WEIDN S+RN D I + FSSGGCEW + V+PKG G D HLSLFL V N S
Sbjct: 4 ELKKSFSWEIDNLSDRNHDMISSEPFSSGGCEWYLIVHPKGHPGYDHHLSLFLSVLNLRS 63
Query: 290 LMLGWKRRASYSFVLLNLSGKELFRTLEEKTCIVFCNEHKSWGYTEVLPLSTKLQEKGFL 469
L LGW RR FV+LN SGKEL RT C +FC E WG ++LPL+ L++
Sbjct: 64 LRLGWHRRVRCFFVILNQSGKELCRTTNGGRCTLFCAEAPQWGLMKMLPLAKLLEDD--- 120
Query: 470 EKDTLIMKIYIKVFEVVHQGKSTENEMLDFCGFQIPIPQYTLLKETVLRKPDFEIYFETE 649
+ + L +++Y++V EVVHQG+STEN +L + G QI Q + R PDFE+ F +
Sbjct: 121 DNNKLTIQVYLEVVEVVHQGQSTENYILPYNGVQILASQALSWTHILSRHPDFEVDFVPK 180
Query: 650 KQVLKTKYRTV-LRILKTLSKPPQSLSLAELGKAQSELNVLEEATGFKLEWFNSKIEQLS 826
+ L++ Y T+ +++TLSK PQSLS AEL AQ++L+ L + GFKL+W SK+E++S
Sbjct: 181 YEELRSVYLTLFFCLIETLSKSPQSLSAAELTNAQNQLSELTK-VGFKLDWLKSKLEEVS 239
Query: 827 VECKKATLSDGSRVGELDDRVRNVELTLWDLKAELDKDKIKSAAASAAAAAAG 985
+E KA ++DG V L++RV+NVELTL L+ +LDKDKIK AA+A ++ G
Sbjct: 240 LERNKA-VTDGCHV--LEERVKNVELTLSGLQVKLDKDKIKYTAAAAGVSSFG 289
>gi|297827931|ref|XP_002881848.1| hypothetical protein ARALYDRAFT_346045
[Arabidopsis lyrata subsp. lyrata]
Length = 293
Score = 226 bits (575), Expect = 7e-057
Identities = 131/282 (46%), Positives = 177/282 (62%), Gaps = 17/282 (6%)
Frame = +2
Query: 116 QMEDTLTWEIDNFSERNDGIRTADFSSGGCEWLVCVYPKGQSGSDHLSLFLHVANCDSLM 295
Q + + T+EIDNFSE+ I ++ F GGCEW V VYPKG DHL++ L+VA+ SL
Sbjct: 15 QKQTSFTFEIDNFSEKKAAISSSLFGCGGCEWYVTVYPKGYYCRDHLAVILNVASPKSLR 74
Query: 296 LGWKRRASYSFVLLNLSGKEL-FRTLEEKTCIVFCNEHKSWGYTEVLPLSTKLQEKGFLE 472
GWKR+ S FVLLN SGKEL + E+ +FC++ SWGY +VLPLS KL E+ FLE
Sbjct: 75 TGWKRKVSPCFVLLNQSGKELQILSTSEEEGSLFCDKVPSWGYHKVLPLS-KLTEEEFLE 133
Query: 473 KDTLIMKIYIKVFEVVHQGKSTENEMLDFCGFQIPIPQYTLLKETVLRKPDFEIYFETEK 652
D LI+K+ +K+ E VH+ + T M GFQI Q L+ + R PD + F+ +
Sbjct: 134 NDKLIIKVEVKLVEAVHEEEVTGKGMYSLNGFQILYTQVLLVSKIFARHPDIAVDFKPKS 193
Query: 653 QVLKTKYRTV-LRILKTLSKPPQSLSLAELGKAQSELNVLEEATGFKLEWFNSKIEQLSV 829
QV+KT Y V L +++TL KPPQS S EL A S+L L EA GFKL+W N+
Sbjct: 194 QVVKTAYMNVLLGLIETLRKPPQSFSETELSNAYSKLRELTEA-GFKLDWKNA------- 245
Query: 830 ECKKATLSDGSRVGELDDRVRNVELTLWDLKAELDKDKIKSA 955
++DGSRV E+++R+ N+++TL DL EL K+K KSA
Sbjct: 246 ------IADGSRVEEVEERINNLKVTLLDLIVELKKEKAKSA 281
>gi|297827929|ref|XP_002881847.1| hypothetical protein ARALYDRAFT_346044
[Arabidopsis lyrata subsp. lyrata]
Length = 301
Score = 215 bits (547), Expect = 1e-053
Identities = 125/284 (44%), Positives = 182/284 (64%), Gaps = 7/284 (2%)
Frame = +2
Query: 116 QMEDTLTWEIDNFSERNDGIRTADFSSGGCEWLVCVYPKGQSGSDHLSLFLHVANCDSLM 295
Q + + T+EIDNFSE+ I ++ + V V+PKG DHL+++L+VA+ SL
Sbjct: 15 QKQTSFTFEIDNFSEKEAEISSSIYIR---MRYVTVHPKGDYCCDHLAVYLNVASPKSLK 71
Query: 296 LGWKRRASYSFVLLNLSGKELFRTLEEKTCIVFCNEHKSWGYTEVLPLSTKLQEKGFLEK 475
GWK+R SY FVLLN SGKEL + + +FC+E +SWGY +V PLS KL+++GFLE
Sbjct: 72 FGWKKRVSYGFVLLNQSGKELQISSTPEEGSLFCDETQSWGYPKVFPLS-KLKKEGFLEN 130
Query: 476 DTLIMKIYIKVFEVVHQGKSTENEMLDFCGFQIPIPQYTLLKETVLRKPDFEIYFETEKQ 655
D LI+K+ +++ E VH + T ML GF++P Q L+ + ++ PD + F+ + Q
Sbjct: 131 DKLIVKVEVEIVEAVHVEEVTGKGMLRIKGFEVPYTQGVLVSKIFVKHPDIAVDFKPKNQ 190
Query: 656 VLKTKYRTV-LRILKTLSKPPQSLSLAELGKAQSELNVLEEATGFKLEWFNSKIEQLSVE 832
V+KT Y V L +++TL KPP S + L A SEL+ L EA GFKL+W K+E++++E
Sbjct: 191 VVKTAYMNVLLGLIETLHKPPCSFTDTMLRNAHSELSELTEA-GFKLDWLKKKLEEVALE 249
Query: 833 CKKATLSDGSRVGELDDRVRNVELTLWDLKAELDKDKIKSAAAS 964
K A ++ SRV EL +R++N+EL L DLK EL K+ KS A S
Sbjct: 250 RKNA-IAGSSRVEELVERIKNMELALSDLKVELKKEIAKSPAVS 292
>gi|297837017|ref|XP_002886390.1| hypothetical protein ARALYDRAFT_893070
[Arabidopsis lyrata subsp. lyrata]
Length = 298
Score = 211 bits (537), Expect = 2e-052
Identities = 119/264 (45%), Positives = 169/264 (64%), Gaps = 5/264 (1%)
Frame = +2
Query: 116 QMEDTLTWEIDNFSERNDGIRTADFSSGGCEWLVCVYPKGQSGSDHLSLFLHVANCDSLM 295
Q + T+EIDNFSE+ IRT +F SGGCEW V V+PKG DHLS++L VAN +SL
Sbjct: 4 QKPTSFTFEIDNFSEKESVIRTTNFLSGGCEWYVKVHPKGDHIDDHLSMYLCVANPESLR 63
Query: 296 LGWKRRASYSFVLLNLSGKELFRTLEEKTCIVFCNEHKSWGYTEVLPLSTKLQEKGFLEK 475
+GWKR A++S LLN SGKEL+R E +FC E G+ + +PL KLQEKGFLE
Sbjct: 64 IGWKRLAAFSIALLNESGKELYRK-HEPFYQLFCAEIPLMGWPKAVPLE-KLQEKGFLEN 121
Query: 476 DTLIMKIYIKVFEVVHQGKSTENEMLDFCGFQIPIPQYTLLKETVLRKPDFEIYFETEKQ 655
+ I + +KV +VV +G T NEMLD GFQ+ Q + + PD + F+ + Q
Sbjct: 122 NKFIFNVQVKVAQVVDEGSVTGNEMLDVNGFQVLYSQVASVSWIFVEHPDVAVNFKPKNQ 181
Query: 656 VLKTKYRTV-LRILKTLSKPPQSLSLAELGKAQSELNVLEEATGFKLEWFNSKIEQLSVE 832
+LKT Y + L +++TL+KP S++ EL +QS+L L EA GFKL+W K++++S+E
Sbjct: 182 LLKTTYMNILLGLIETLNKPLHSITETELNNSQSDLIELTEA-GFKLDWLKIKLDEVSLE 240
Query: 833 CKKATLSDGSRVGELDDRVRNVEL 904
K A + DG RV L + ++N+++
Sbjct: 241 RKIADV-DGYRVQSLAEHIKNLKI 263
>gi|4567322|gb|AAD23733.1| hypothetical protein [Arabidopsis thaliana]
Length = 441
Score = 201 bits (511), Expect = 2e-049
Identities = 117/277 (42%), Positives = 169/277 (61%), Gaps = 6/277 (2%)
Frame = +2
Query: 110 DLQMEDTLTWEIDNFSERNDGIRTADFSSGGCEWLVCVYPKGQSGSDHLSLFLHVANCDS 289
++ ++ T TW+I+NFS R I + FSSGGCE V + PKG D+LSL+L V N S
Sbjct: 2 EIDLQKTFTWKIENFSGRKFPITSTVFSSGGCECYVLIRPKGDGFEDYLSLYLCVGNPKS 61
Query: 290 LMLGWKRRASYSFVLLNLSGKELFRTLEEKTCIVFCNEHKSWGYTEVLPLSTKLQEKGFL 469
L GWKRRAS F++LN SGKE+ RT E +F E WG+ LPL TKLQ++ L
Sbjct: 62 LQPGWKRRASLHFIVLNQSGKEVHRTSERYG--LFGPEIPGWGFRTALPL-TKLQDRELL 118
Query: 470 EKDTLIMKIYIKVFEVVHQGKSTENEMLDFCGFQIPIPQYTLLKETVLRKPDFEIYFETE 649
E +TL +++YIKV EVVH+G T +MLDF GF + Q + + P F +
Sbjct: 119 ENNTLFIEVYIKVTEVVHEGDETRKDMLDFKGFNVLSSQIASVSPIFAKYPKFADDIKPT 178
Query: 650 KQVLKTKY-RTVLRILKTLSKPPQSLSLAELGKAQSELNVLEEATGFKLEWFNSKIEQLS 826
+ +KT Y + +L ++KT++KPP+ S EL KA S L L E GF+++W SK++++S
Sbjct: 179 SKAVKTVYLKILLGLIKTVNKPPEIFSETELIKAYSSLIDLME-VGFRVKWLKSKLDEIS 237
Query: 827 VECKKATLSDGSRVGELDDRVRN-VELTLWDLKAELD 934
+ KK +D +RV EL+ +V+N VEL K+ ++
Sbjct: 238 LARKKKVDADAARVQELEGKVKNQVELDKEKTKSHVE 274
>gi|334184872|ref|NP_181774.2| TRAF-like family protein [Arabidopsis thaliana]
Length = 442
Score = 201 bits (511), Expect = 2e-049
Identities = 117/277 (42%), Positives = 169/277 (61%), Gaps = 6/277 (2%)
Frame = +2
Query: 110 DLQMEDTLTWEIDNFSERNDGIRTADFSSGGCEWLVCVYPKGQSGSDHLSLFLHVANCDS 289
++ ++ T TW+I+NFS R I + FSSGGCE V + PKG D+LSL+L V N S
Sbjct: 3 EIDLQKTFTWKIENFSGRKFPITSTVFSSGGCECYVLIRPKGDGFEDYLSLYLCVGNPKS 62
Query: 290 LMLGWKRRASYSFVLLNLSGKELFRTLEEKTCIVFCNEHKSWGYTEVLPLSTKLQEKGFL 469
L GWKRRAS F++LN SGKE+ RT E +F E WG+ LPL TKLQ++ L
Sbjct: 63 LQPGWKRRASLHFIVLNQSGKEVHRTSERYG--LFGPEIPGWGFRTALPL-TKLQDRELL 119
Query: 470 EKDTLIMKIYIKVFEVVHQGKSTENEMLDFCGFQIPIPQYTLLKETVLRKPDFEIYFETE 649
E +TL +++YIKV EVVH+G T +MLDF GF + Q + + P F +
Sbjct: 120 ENNTLFIEVYIKVTEVVHEGDETRKDMLDFKGFNVLSSQIASVSPIFAKYPKFADDIKPT 179
Query: 650 KQVLKTKY-RTVLRILKTLSKPPQSLSLAELGKAQSELNVLEEATGFKLEWFNSKIEQLS 826
+ +KT Y + +L ++KT++KPP+ S EL KA S L L E GF+++W SK++++S
Sbjct: 180 SKAVKTVYLKILLGLIKTVNKPPEIFSETELIKAYSSLIDLME-VGFRVKWLKSKLDEIS 238
Query: 827 VECKKATLSDGSRVGELDDRVRN-VELTLWDLKAELD 934
+ KK +D +RV EL+ +V+N VEL K+ ++
Sbjct: 239 LARKKKVDADAARVQELEGKVKNQVELDKEKTKSHVE 275
>gi|334184874|ref|NP_001189731.1| TRAF-like family protein [Arabidopsis
thaliana]
Length = 299
Score = 201 bits (511), Expect = 2e-049
Identities = 117/277 (42%), Positives = 169/277 (61%), Gaps = 6/277 (2%)
Frame = +2
Query: 110 DLQMEDTLTWEIDNFSERNDGIRTADFSSGGCEWLVCVYPKGQSGSDHLSLFLHVANCDS 289
++ ++ T TW+I+NFS R I + FSSGGCE V + PKG D+LSL+L V N S
Sbjct: 3 EIDLQKTFTWKIENFSGRKFPITSTVFSSGGCECYVLIRPKGDGFEDYLSLYLCVGNPKS 62
Query: 290 LMLGWKRRASYSFVLLNLSGKELFRTLEEKTCIVFCNEHKSWGYTEVLPLSTKLQEKGFL 469
L GWKRRAS F++LN SGKE+ RT E +F E WG+ LPL TKLQ++ L
Sbjct: 63 LQPGWKRRASLHFIVLNQSGKEVHRTSERYG--LFGPEIPGWGFRTALPL-TKLQDRELL 119
Query: 470 EKDTLIMKIYIKVFEVVHQGKSTENEMLDFCGFQIPIPQYTLLKETVLRKPDFEIYFETE 649
E +TL +++YIKV EVVH+G T +MLDF GF + Q + + P F +
Sbjct: 120 ENNTLFIEVYIKVTEVVHEGDETRKDMLDFKGFNVLSSQIASVSPIFAKYPKFADDIKPT 179
Query: 650 KQVLKTKY-RTVLRILKTLSKPPQSLSLAELGKAQSELNVLEEATGFKLEWFNSKIEQLS 826
+ +KT Y + +L ++KT++KPP+ S EL KA S L L E GF+++W SK++++S
Sbjct: 180 SKAVKTVYLKILLGLIKTVNKPPEIFSETELIKAYSSLIDLME-VGFRVKWLKSKLDEIS 238
Query: 827 VECKKATLSDGSRVGELDDRVRN-VELTLWDLKAELD 934
+ KK +D +RV EL+ +V+N VEL K+ ++
Sbjct: 239 LARKKKVDADAARVQELEGKVKNQVELDKEKTKSHVE 275
>gi|26451189|dbj|BAC42698.1| unknown protein [Arabidopsis thaliana]
Length = 299
Score = 200 bits (508), Expect = 4e-049
Identities = 116/277 (41%), Positives = 169/277 (61%), Gaps = 6/277 (2%)
Frame = +2
Query: 110 DLQMEDTLTWEIDNFSERNDGIRTADFSSGGCEWLVCVYPKGQSGSDHLSLFLHVANCDS 289
++ ++ T TW+I+NFS R I + FSSGGCE V + PKG D+LSL+L V N S
Sbjct: 3 EIDLQKTFTWKIENFSGRKFPITSTVFSSGGCECYVLIRPKGDGFEDYLSLYLCVGNPKS 62
Query: 290 LMLGWKRRASYSFVLLNLSGKELFRTLEEKTCIVFCNEHKSWGYTEVLPLSTKLQEKGFL 469
L GWKRRAS F++LN SGKE+ RT E +F E WG+ LPL TKLQ++ L
Sbjct: 63 LQPGWKRRASLHFIVLNQSGKEVHRTSERYG--LFGPEIPGWGFRTALPL-TKLQDRELL 119
Query: 470 EKDTLIMKIYIKVFEVVHQGKSTENEMLDFCGFQIPIPQYTLLKETVLRKPDFEIYFETE 649
E +TL +++YIKV EVVH+G T +MLDF GF + Q + + P F +
Sbjct: 120 ENNTLFIEVYIKVTEVVHEGDETRKDMLDFKGFNVLSSQIASVSPIFAKYPKFADDIKPT 179
Query: 650 KQVLKTKY-RTVLRILKTLSKPPQSLSLAELGKAQSELNVLEEATGFKLEWFNSKIEQLS 826
+ +KT Y + +L ++KT+++PP+ S EL KA S L L E GF+++W SK++++S
Sbjct: 180 SKAVKTVYLKILLGLIKTVNRPPEIFSETELIKAYSSLIDLME-VGFRVKWLKSKLDEIS 238
Query: 827 VECKKATLSDGSRVGELDDRVRN-VELTLWDLKAELD 934
+ KK +D +RV EL+ +V+N VEL K+ ++
Sbjct: 239 LARKKKVDADAARVQELEGKVKNQVELDKEKTKSHVE 275
>gi|297827939|ref|XP_002881852.1| hypothetical protein ARALYDRAFT_321928
[Arabidopsis lyrata subsp. lyrata]
Length = 742
Score = 163 bits (412), Expect = 6e-038
Identities = 84/153 (54%), Positives = 106/153 (69%), Gaps = 3/153 (1%)
Frame = +2
Query: 116 QMEDTLTWEIDNFSERNDGIRTADFSSGGCEWLVCVYPKGQSGSDHLSLFLHVANCDSLM 295
Q T+EIDNFSE+ I + F SG C+W V VY G DH+S++LHVAN SL
Sbjct: 397 QKTSCFTFEIDNFSEKKYVIASPIFISGQCQWFVKVYTNGYFNKDHVSVYLHVANPQSLR 456
Query: 296 LGWKRRASYSFVLLNLSGKELFRTLEEKTCIVFCNEHKSWGYTEVLPLSTKLQEKGFLEK 475
GWKRR +YSF+L N SGKEL RT E +C +FC E +WGY ++LPLS KL+E+GFLE
Sbjct: 457 PGWKRRVNYSFILFNQSGKELKRTPE--SCDLFCTEVSAWGYPKLLPLS-KLKEEGFLEN 513
Query: 476 DTLIMKIYIKVFEVVHQGKSTENEMLDFCGFQI 574
D LI+K+ +KV EVVH G+ T EM+DF GFQ+
Sbjct: 514 DKLIIKVEVKVVEVVHVGEVTGKEMVDFKGFQV 546
Score = 129 bits (323), Expect = 1e-027
Identities = 75/167 (44%), Positives = 102/167 (61%), Gaps = 8/167 (4%)
Frame = +2
Query: 137 WEIDNFSERNDGIRTADFSSGGCEWLVCVYPKGQSGSDHLSLFLHVANCDSLMLGWKRRA 316
+EIDNFSE+ D I + F SGGCEW + +Y +G DH+SLFL+VAN SL GWKR A
Sbjct: 10 FEIDNFSEKKDTIASQAFVSGGCEWFIYLYSEG----DHMSLFLYVANRTSLGSGWKRSA 65
Query: 317 SYSFVLLNLSGKELFRTLEEKTCIVFCNEHKSWGYTEVLPLSTKLQEKGFLEKDTLIMKI 496
++ F +LN S KEL+R+ + +F E WG+ ++LPLS K +EKGFLEKD LI+++
Sbjct: 66 NFYFSVLNQSEKELYRSPVGQEPYLFRVEGPGWGFRKILPLS-KFEEKGFLEKDRLIIEV 124
Query: 497 YIKVFEVVH---QGKSTENEMLDFCGFQIPIPQYTLLKETVLRKPDF 628
YIKV E V G S + E +D + Q +L L + F
Sbjct: 125 YIKVVEAVDGEGGGVSKKKETVDIINSEDYASQASLKGSVTLMRKIF 171
>gi|15227947|ref|NP_181776.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 743
Score = 138 bits (346), Expect = 3e-030
Identities = 75/151 (49%), Positives = 97/151 (64%), Gaps = 7/151 (4%)
Frame = +2
Query: 137 WEIDNFSERNDGIRTADFSSGGCEWLVCVYPKGQS-GSDHLSLFLHVANCDSLMLGWKRR 313
+EIDNFSE+ D I + F SGGCEW + +YPKGQS DH+SL+L VAN SL GWKR
Sbjct: 10 FEIDNFSEKKDVIASKAFVSGGCEWFLYLYPKGQSLNDDHMSLYLSVANSKSLGSGWKRS 69
Query: 314 ASYSFVLLNLSGKELFRTLEEKTCIVFCNEHKSWGYTEVLPLSTKLQEKGFLEKDTLIMK 493
A + F +LN S KEL+R+ + +FC + +WG + LPLS K +EKGFLEKD LI++
Sbjct: 70 AKFYFSVLNESDKELYRSTISQEFCLFCVQALAWGIRKALPLS-KFEEKGFLEKDKLIVE 128
Query: 494 IYIKVFEVVH-----QGKSTENEMLDFCGFQ 571
+YIK FE V K E E ++ G Q
Sbjct: 129 VYIKNFEAVDGEGGGVSKKEEEETVEIIGSQ 159
Score = 131 bits (329), Expect = 2e-028
Identities = 76/162 (46%), Positives = 105/162 (64%), Gaps = 7/162 (4%)
Frame = +2
Query: 80 SLSLTASIRRDLQ--MEDTLTWEIDNFSERNDGIRTADFSSGGCEWLVCVYPKGQSGSDH 253
SL + AS +RD++ + + T+EI+NFSER I + F SG C W V VYP + DH
Sbjct: 375 SLRIKAS-KRDMENHQKTSFTFEIENFSERKYLIWSPIFISGQCHWFVKVYPIKDNNYDH 433
Query: 254 LSLFLHVANCDSLMLGWKRRASYSFVLLNLSGKELFRTLEEKTCIVFCNEHKSWGYTEVL 433
+S++LHVAN SL GWKRRA +S +L N SGKE+ + +C +FC E S Y ++L
Sbjct: 434 VSVYLHVANPQSLRPGWKRRAHFSLILSNQSGKEV--KIPSDSCDLFCTELSS-SYPKIL 490
Query: 434 PLSTKLQEKGFLEKDTLIMKIYIKVFEVVHQGKSTENEMLDF 559
P KL+E+GFLE D LI+ + +KV EVVH G+ T EM++F
Sbjct: 491 P-PIKLKEEGFLENDKLIITVEVKVVEVVHPGELTGKEMVEF 531
>gi|297827933|ref|XP_002881849.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 280
Score = 134 bits (335), Expect = 5e-029
Identities = 88/243 (36%), Positives = 130/243 (53%), Gaps = 12/243 (4%)
Frame = +2
Query: 134 TWEIDNFSERNDGIRTADFSSGGCEWLVCVYPKGQSGSDHLSLFLHVANCDSLMLGWKRR 313
T+EI+NFSE+ + F GG EW V V P + +L L+L V N L+ GW+ R
Sbjct: 22 TFEINNFSEKKASFMSPTFLGGGSEWYVQVQPNEKDFGGYLRLYLCVQNPKLLLTGWRTR 81
Query: 314 ASYSFVLLNLSGKELFRTLEEKTCIVFCNEHKSWGYTEVLPLSTKLQEKGFLEKDTLIMK 493
A Y FVLLN SGKEL+R E T +FC + + WG LPLS KL+E+GFLE + LI++
Sbjct: 82 ARYRFVLLNQSGKELYRAAE--TSSLFCAQFRMWG-DRTLPLS-KLKEEGFLENNKLIIR 137
Query: 494 IYIKVFEVVHQGKSTENEMLDFCGFQIPIPQYTLLKETVLRKPDFEIYFETEKQVLKTKY 673
+ +K+ E +G T E + GF++P Q T + + ++ PD F+ + LKT Y
Sbjct: 138 VEVKLTE---EGYVTGKETFEIKGFEVPSTQVTSVSQLFMKHPDLATDFKLNGKCLKTAY 194
Query: 674 RTVLRILKTLSKPPQSLSLAELGKAQSELNVLEEATGFKLEWFNSKIEQLSVECK--KAT 847
+L LS+ ++ + K + E LE F S++E++ K + T
Sbjct: 195 MNLLLANSELSELTEAGFKLDWLKTKLEEVALERKNAFS---DGSQVEEVEERIKNLELT 251
Query: 848 LSD 856
LSD
Sbjct: 252 LSD 254
>gi|297824211|ref|XP_002879988.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 168
Score = 126 bits (314), Expect = 1e-026
Identities = 67/132 (50%), Positives = 93/132 (70%), Gaps = 5/132 (3%)
Frame = +2
Query: 116 QMEDTLTWEIDNFSERNDGIRTADFSSGGCEWLVCVYPKGQSGSDHLSLFLHVANCDSLM 295
Q + + T+EIDNFSE+ I ++ F G C+W V V+PKG D+L+L+L VA+ SL
Sbjct: 15 QKQTSFTFEIDNFSEKEAEISSSIFECGRCKWYVTVHPKGDYFCDYLALYLTVASPKSLR 74
Query: 296 LGWKRRASYSFVLLNLSGKEL--FRTLEEKTCIVFCNEHKSWGYTEVLPLSTKLQEKGFL 469
GWK+R SY FV+LN SGK+L RT EE + +FC+E +SWGY +V PLS KL+E+GFL
Sbjct: 75 TGWKKRVSYCFVVLNQSGKKLQILRTPEEGS--LFCDETQSWGYPKVYPLS-KLKEEGFL 131
Query: 470 EKDTLIMKIYIK 505
E + LI+K+ +K
Sbjct: 132 ENNKLIVKVEVK 143
>gi|297827937|ref|XP_002881851.1| hypothetical protein ARALYDRAFT_321927
[Arabidopsis lyrata subsp. lyrata]
Length = 882
Score = 124 bits (310), Expect = 4e-026
Identities = 74/164 (45%), Positives = 102/164 (62%), Gaps = 8/164 (4%)
Frame = +2
Query: 47 NQRPSEDSLSLSLSL--TASIRRDLQM----EDTLTWEIDNFSERNDGIRTADFSSGGCE 208
N+ S S+S SL+ T +++++ QM LT + NFS+++ I + F SGGC+
Sbjct: 439 NKSKSNSSVSSSLAQRNTKTLKKNKQMGTQFRKALTLTVTNFSQKSSPINSPPFPSGGCD 498
Query: 209 WLVCVYPKGQSGSDHLSLFLHVANCDSLMLGWKRRASYSFVLLNLSGKELFRTLEEKTCI 388
W + VYPKG ++LSLFL + SL L WKRRA++ FVLLN SGKEL RT E
Sbjct: 499 WYIKVYPKGSVDDNYLSLFLSPDDPKSLGLNWKRRANFYFVLLNQSGKELHRT-PEIGDQ 557
Query: 389 VFCNEHKSWGYTEVLPLSTKLQEKGFLEKDTLIMKIYIKVFEVV 520
VFC++ SWG+ + LP KL +K FL+ D ++IYIKV EVV
Sbjct: 558 VFCDDSLSWGFPQTLP-RKKLLDKIFLDNDRFNIEIYIKVIEVV 600
>gi|15227946|ref|NP_181775.1| TRAF-like family protein [Arabidopsis thaliana]
Length = 898
Score = 116 bits (289), Expect = 1e-023
Identities = 64/135 (47%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Frame = +2
Query: 116 QMEDTLTWEIDNFSERNDGIRTADFSSGGCEWLVCVYPKGQSGSDHLSLFLHVANCDSLM 295
Q LT + NFS+++ I + F SGGC W + YPKG + ++LSLFL + SL
Sbjct: 487 QFRKALTLTVTNFSQKSSPINSPPFPSGGCNWYIKFYPKGSADDNYLSLFLSPDDPKSLG 546
Query: 296 LGWKRRASYSFVLLNLSGKELFRTLEEKTCIVFCNEHKSWGYTEVLPLSTKLQEKGFLEK 475
L WKRRA++ FVLLN SGKEL RT E FC++ SWG+ + LP KL +K FL+
Sbjct: 547 LNWKRRANFYFVLLNQSGKELHRT-PEIGDQWFCDDSLSWGFPQTLP-RKKLLDKIFLDN 604
Query: 476 DTLIMKIYIKVFEVV 520
D ++IYIKV EVV
Sbjct: 605 DRFNIEIYIKVIEVV 619
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,166,889,954,044
Number of Sequences: 15229318
Number of Extensions: 2166889954044
Number of Successful Extensions: 554456772
Number of sequences better than 0.0: 0
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