BLASTX 7.6.2
Query= UN18852 /QuerySize=1109
(1108 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9USY2|YOW4_SCHPO Uncharacterized RNA-binding protein C1861.0... 64 1e-009
sp|Q7SG09|MRD1_NEUCR Multiple RNA-binding domain-containing prot... 59 7e-008
sp|P27476|NSR1_YEAST Nuclear localization sequence-binding prote... 56 5e-007
sp|Q5AJS6|MRD1_CANAL Multiple RNA-binding domain-containing prot... 55 6e-007
sp|Q75A83|MRD1_ASHGO Multiple RNA-binding domain-containing prot... 55 8e-007
sp|Q6CEW9|MRD1_YARLI Multiple RNA-binding domain-containing prot... 55 1e-006
sp|Q4WJT7|MRD1_ASPFU Multiple RNA-binding domain-containing prot... 54 2e-006
sp|Q5BGA9|MRD1_EMENI Multiple RNA-binding domain-containing prot... 54 2e-006
sp|Q6CQR6|MRD1_KLULA Multiple RNA-binding domain-containing prot... 54 2e-006
sp|Q9H0L4|CSTFT_HUMAN Cleavage stimulation factor subunit 2 tau ... 53 4e-006
sp|Q8C7E9|CSTFT_MOUSE Cleavage stimulation factor subunit 2 tau ... 53 4e-006
sp|Q0U1G2|PABP_PHANO Polyadenylate-binding protein, cytoplasmic ... 52 5e-006
sp|Q06106|MRD1_YEAST Multiple RNA-binding domain-containing prot... 52 9e-006
>sp|Q9USY2|YOW4_SCHPO Uncharacterized RNA-binding protein C1861.04c
OS=Schizosaccharomyces pombe GN=SPBC1861.04c PE=2 SV=1
Length = 1014
Score = 64 bits (155), Expect = 1e-009
Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 18/179 (10%)
Frame = +2
Query: 263 TRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGLVFIEMASPEEAASALQA 442
T L N P T DI LF YGNVVDV + NR +++M P+EA +ALQ
Sbjct: 666 TNLYVTNFPPTYDELDITKLFSAYGNVVDVRFPSLRYNTNRRFCYVQMRKPDEAHNALQL 725
Query: 443 LESYEYEGRRLKVAYAKAKKK-----KTYAPREKPTPVPTFNLFVANLAFEARAKHLKEF 607
+ E ++V + ++ Y RE L+V N+ F+ K ++ F
Sbjct: 726 HKKLLEEKYPIQVFISDPLRRTPRSGAVYEGRE---------LYVTNIDFKVNEKDVETF 776
Query: 608 FDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADAALLEFQGKDFMGRPIRLARSK 784
F D G V S + N + G+G+V T + A+ A L GK R + + SK
Sbjct: 777 F-RDYGQVESVRIPKRFNQHK--GFGYVVMTTNQDAENA-LSAAGKQLGNRVLNVVLSK 831
>sp|Q7SG09|MRD1_NEUCR Multiple RNA-binding domain-containing protein 1
OS=Neurospora crassa GN=mrd-1 PE=3 SV=1
Length = 827
Score = 59 bits (140), Expect = 7e-008
Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
Frame = +2
Query: 263 TRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGLVFIEMASPEEAASALQA 442
T+L+ +N+P+ T +++R+LF YG +V + + + +RG F E ++ +EA +A +
Sbjct: 704 TKLVVKNLPFEVTKKEVRTLFSAYGKLVALRIPKKFNQSSRGFAFAEFSTAKEALNAFNS 763
Query: 443 LESYEYEGRRLKVAYAKAK---KKKTYAPREKPTPVPTFNLFVANLAFEARAK 592
L+ GRRL + +A+A+ + A EK T + + L RAK
Sbjct: 764 LKDTHILGRRLVIDFAQAEDIDPEDQIAAMEKKTRAQVNKVALQQLTGTGRAK 816
>sp|P27476|NSR1_YEAST Nuclear localization sequence-binding protein
OS=Saccharomyces cerevisiae GN=NSR1 PE=1 SV=1
Length = 414
Score = 56 bits (133), Expect = 5e-007
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Frame = +2
Query: 494 AKKKKTYAPREKPTPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRS 673
+ KK+ E+P +FV L++ + LK+ F+ G V+ VI+ RS
Sbjct: 155 SNKKQKNEETEEPA-----TIFVGRLSWSIDDEWLKKEFE-HIGGVIGARVIYERGTDRS 208
Query: 674 SGYGFVSFKTKKMADAALLEFQGKDFMGRPI 766
GYG+V F+ K A+ A+ E QGK+ GRPI
Sbjct: 209 RGYGYVDFENKSYAEKAIQEMQGKEIDGRPI 239
>sp|Q5AJS6|MRD1_CANAL Multiple RNA-binding domain-containing protein 1
OS=Candida albicans GN=MRD1 PE=3 SV=1
Length = 841
Score = 55 bits (132), Expect = 6e-007
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Frame = +2
Query: 230 SSSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGLVFIEMA 409
S+SS + +++I +N+P+ +T +D+ LF +G + V + + RG F+E
Sbjct: 706 SASSIKKSGKSSKIIIKNLPFEATRKDLLELFGAFGQLKSVRVPKKFDQSARGFAFVEFN 765
Query: 410 SPEEAASALQALESYEYEGRRLKVAYAKAKKKKTYAPREKPT-----PVPTFNLFVANLA 574
+EA +A+ LE GRRL + YA+ + E+ T V T NL A LA
Sbjct: 766 LMKEAETAMSQLEGVHLLGRRLVMQYAEQDPENAEVEIERMTKKVKKQVATQNLAAARLA 825
>sp|Q75A83|MRD1_ASHGO Multiple RNA-binding domain-containing protein 1 OS=Ashbya
gossypii GN=MRD1 PE=3 SV=1
Length = 838
Score = 55 bits (131), Expect = 8e-007
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Frame = +2
Query: 212 QEPILESSSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGL 391
Q + ++S S ++IS ++I +N+P+ +T +D+ LF +G + V + + RG
Sbjct: 696 QSSLPKTSKGSKKKIS-GKIIVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARGF 754
Query: 392 VFIEMASPEEAASALQALESYEYEGRRLKVAYAK 493
F+E P EA +A+ L+ GRRL + YA+
Sbjct: 755 AFVEFLLPSEAENAMDQLQGVHLLGRRLVMQYAE 788
>sp|Q6CEW9|MRD1_YARLI Multiple RNA-binding domain-containing protein 1
OS=Yarrowia lipolytica GN=MRD1 PE=3 SV=1
Length = 828
Score = 55 bits (130), Expect = 1e-006
Identities = 25/90 (27%), Positives = 52/90 (57%)
Frame = +2
Query: 227 ESSSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGLVFIEM 406
+ ++ +++ ++++ +N+P+ +T +D++ LF +G++ V + +RG F E
Sbjct: 691 DEETTETKKAIDSKILIKNLPFEATKKDVQKLFGAFGSLKTVRVPKKFNSESRGFAFAEY 750
Query: 407 ASPEEAASALQALESYEYEGRRLKVAYAKA 496
S +EA A+ AL+ GRRL + YA+A
Sbjct: 751 VSAKEAEHAMSALQGTHLLGRRLVLQYAQA 780
>sp|Q4WJT7|MRD1_ASPFU Multiple RNA-binding domain-containing protein 1
OS=Aspergillus fumigatus GN=mrd1 PE=3 SV=1
Length = 825
Score = 54 bits (128), Expect = 2e-006
Identities = 27/77 (35%), Positives = 45/77 (58%)
Frame = +2
Query: 260 KTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGLVFIEMASPEEAASALQ 439
+T++I +N+P+ +T +D+RSLF YG + V + RG F + S EA +A+
Sbjct: 701 RTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSARGFGFADFVSAREAENAMD 760
Query: 440 ALESYEYEGRRLKVAYA 490
AL++ GRRL + +A
Sbjct: 761 ALKNTHLLGRRLVLEFA 777
>sp|Q5BGA9|MRD1_EMENI Multiple RNA-binding domain-containing protein 1
OS=Emericella nidulans GN=mrd1 PE=3 SV=1
Length = 819
Score = 54 bits (128), Expect = 2e-006
Identities = 27/77 (35%), Positives = 45/77 (58%)
Frame = +2
Query: 260 KTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGLVFIEMASPEEAASALQ 439
+T++I +N+P+ +T +D+RSLF YG + V + RG F + S EA +A+
Sbjct: 696 RTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSARGFGFADFVSAREAENAMD 755
Query: 440 ALESYEYEGRRLKVAYA 490
AL++ GRRL + +A
Sbjct: 756 ALKNTHLLGRRLVLEFA 772
>sp|Q6CQR6|MRD1_KLULA Multiple RNA-binding domain-containing protein 1
OS=Kluyveromyces lactis GN=MRD1 PE=3 SV=1
Length = 878
Score = 54 bits (127), Expect = 2e-006
Identities = 27/102 (26%), Positives = 54/102 (52%)
Frame = +2
Query: 230 SSSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGLVFIEMA 409
++SS ++ ++ ++I +N+P+ +T +D+ LF +G + V + + RG F+E
Sbjct: 741 NASSKKKKKNQGKIIVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARGFAFVEFL 800
Query: 410 SPEEAASALQALESYEYEGRRLKVAYAKAKKKKTYAPREKPT 535
P+EA +A+ L+ GRRL + + + + EK T
Sbjct: 801 LPKEAENAMDQLQGVHLLGRRLVMEFVEQDPEDVEQQIEKMT 842
>sp|Q9H0L4|CSTFT_HUMAN Cleavage stimulation factor subunit 2 tau variant OS=Homo
sapiens GN=CSTF2T PE=1 SV=1
Length = 616
Score = 53 bits (125), Expect = 4e-006
Identities = 23/74 (31%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +2
Query: 551 NLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADAALL 730
++FV N+ +EA + LK+ F ++ G+VVS +++ + GYGF ++ ++ A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIF-SEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 731 EFQGKDFMGRPIRL 772
G++F GR +R+
Sbjct: 76 NLNGREFSGRALRV 89
>sp|Q8C7E9|CSTFT_MOUSE Cleavage stimulation factor subunit 2 tau variant OS=Mus
musculus GN=Cstf2t PE=1 SV=2
Length = 632
Score = 53 bits (125), Expect = 4e-006
Identities = 23/74 (31%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +2
Query: 551 NLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADAALL 730
++FV N+ +EA + LK+ F ++ G+VVS +++ + GYGF ++ ++ A +A+
Sbjct: 17 SVFVGNIPYEATEEQLKDIF-SEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 731 EFQGKDFMGRPIRL 772
G++F GR +R+
Sbjct: 76 NLNGREFSGRALRV 89
>sp|Q0U1G2|PABP_PHANO Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Phaeosphaeria nodorum GN=PAB1 PE=3 SV=3
Length = 744
Score = 52 bits (124), Expect = 5e-006
Identities = 25/82 (30%), Positives = 45/82 (54%)
Frame = +2
Query: 263 TRLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGLVFIEMASPEEAASALQA 442
T + +N+ T ED R LFEK+G++ ++ + ++RG F+ E AA A+
Sbjct: 229 TNIYVKNIDLDVTDEDFRELFEKHGDITSASIARDDQGKSRGFGFVNYIRHEAAAVAVDH 288
Query: 443 LESYEYEGRRLKVAYAKAKKKK 508
L E++G++L V A+ K ++
Sbjct: 289 LNDIEFKGQKLYVGRAQKKHER 310
>sp|Q06106|MRD1_YEAST Multiple RNA-binding domain-containing protein 1
OS=Saccharomyces cerevisiae GN=MRD1 PE=1 SV=1
Length = 887
Score = 52 bits (122), Expect = 9e-006
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +2
Query: 227 ESSSSSSEEISKT-RLIAQNVPWTSTPEDIRSLFEKYGNVVDVEMSMHKKERNRGLVFIE 403
+S ++ ++ K+ ++I +N+P+ +T +D+ LF +G + V + + RG F+E
Sbjct: 750 QSGNTKTKSNKKSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARGFAFVE 809
Query: 404 MASPEEAASALQALESYEYEGRRLKVAYAK 493
P+EA +A+ L GRRL + YA+
Sbjct: 810 FLLPKEAENAMDQLHGVHLLGRRLVMQYAE 839
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,378,909,851
Number of Sequences: 518415
Number of Extensions: 78378909851
Number of Successful Extensions: 523441567
Number of sequences better than 0.0: 0
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