BLASTX 7.6.2
Query= UN18873 /QuerySize=1547
(1546 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G58700.1 | Symbols: | 60S ribosomal protein L... 364 1e-100
TAIR9_protein||AT4G18730.1 | Symbols: RPL16B | RPL16B; structura... 364 1e-100
TAIR9_protein||AT5G45775.2 | Symbols: | 60S ribosomal protein L... 364 1e-100
TAIR9_protein||AT2G42740.1 | Symbols: RPL16A | RPL16A; structura... 362 4e-100
TAIR9_protein||AT5G45775.1 | Symbols: | 60S ribosomal protein L... 345 5e-095
TAIR9_protein||AT4G18740.2 | Symbols: | unknown protein | chr4:... 223 4e-058
TAIR9_protein||AT4G18740.1 | Symbols: | transcription terminati... 175 7e-044
>TAIR9_protein||AT3G58700.1 | Symbols: | 60S ribosomal protein L11 (RPL11B) |
chr3:21711661-21712816 FORWARD
Length = 183
Score = 364 bits (933), Expect = 1e-100
Identities = 181/183 (98%), Positives = 182/183 (99%)
Frame = -2
Query: 1464 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 1285
MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 1284 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 1105
IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
Query: 1104 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 925
STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180
Query: 924 TG* 916
TG*
Sbjct: 181 TG* 183
>TAIR9_protein||AT4G18730.1 | Symbols: RPL16B | RPL16B; structural constituent
of ribosome | chr4:10302238-10303206 FORWARD
Length = 183
Score = 364 bits (933), Expect = 1e-100
Identities = 181/183 (98%), Positives = 182/183 (99%)
Frame = -2
Query: 1464 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 1285
MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 1284 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 1105
IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
Query: 1104 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 925
STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180
Query: 924 TG* 916
TG*
Sbjct: 181 TG* 183
>TAIR9_protein||AT5G45775.2 | Symbols: | 60S ribosomal protein L11 (RPL11D) |
chr5:18565281-18566496 REVERSE
Length = 183
Score = 364 bits (933), Expect = 1e-100
Identities = 181/183 (98%), Positives = 182/183 (99%)
Frame = -2
Query: 1464 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 1285
MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 1284 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 1105
IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
Query: 1104 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 925
STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180
Query: 924 TG* 916
TG*
Sbjct: 181 TG* 183
>TAIR9_protein||AT2G42740.1 | Symbols: RPL16A | RPL16A; structural constituent
of ribosome | chr2:17791794-17792946 FORWARD
Length = 183
Score = 362 bits (928), Expect = 4e-100
Identities = 180/183 (98%), Positives = 181/183 (98%)
Frame = -2
Query: 1464 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 1285
MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 1284 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 1105
IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
Query: 1104 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 925
STGIYGMDFYVVLERPGYRVARRRRCK RVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180
Query: 924 TG* 916
TG*
Sbjct: 181 TG* 183
>TAIR9_protein||AT5G45775.1 | Symbols: | 60S ribosomal protein L11 (RPL11D) |
chr5:18565281-18566377 REVERSE
Length = 173
Score = 345 bits (884), Expect = 5e-095
Identities = 171/173 (98%), Positives = 172/173 (99%)
Frame = -2
Query: 1434 MRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACY 1255
MRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACY
Sbjct: 1 MRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACY 60
Query: 1254 VTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFY 1075
VTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFY
Sbjct: 61 VTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFY 120
Query: 1074 VVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNITG* 916
VVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNITG*
Sbjct: 121 VVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNITG* 173
>TAIR9_protein||AT4G18740.2 | Symbols: | unknown protein |
chr4:10303543-10304479 REVERSE
Length = 215
Score = 223 bits (566), Expect = 4e-058
Identities = 133/217 (61%), Positives = 156/217 (71%), Gaps = 16/217 (7%)
Frame = +3
Query: 72 MDLALH----FPSLIKQGFTR---ANHLPVRDSLSTSFG----QSFSRTAFDGDRRSWPG 218
MDLALH +P LIK GF R ANHL VRD+ S F QS SRT +GDR W
Sbjct: 1 MDLALHCHCAYP-LIKLGFMRAKSANHLHVRDTHSLPFALRFEQSLSRTTINGDRSIWFQ 59
Query: 219 EKAWWSSSLTRRSKKGSVVCCKNPSDEQSSDSSKSKQEEIIALLSRIQASISKGESQGA- 395
EK S + RSKKG VCCK PSD ++S+ SKS QEEII+LL RIQ+SISKGES+G
Sbjct: 60 EKGGSSYTSMGRSKKG-CVCCKKPSDRRTSNPSKSNQEEIISLLKRIQSSISKGESRGVE 118
Query: 396 DEKNSNDSCGNGSLSKAILDVLEKPREKTEGDAGLRKEPPKRQV--ARPPFSFAKRAPTR 569
+EKNS++S L+KAILDVLEK R+KTEGD ++++PPKRQV RPP SF KR P
Sbjct: 119 EEKNSDESSKEKPLTKAILDVLEKSRKKTEGDTSVKEKPPKRQVELPRPPSSFVKRTPLS 178
Query: 570 PSASDPRELKEVAKNRGLKGYSKLKKSEILELLRSS* 680
SAS PRELKEVAKNRG+KGYSKL+KSE+LEL+RSS*
Sbjct: 179 SSASGPRELKEVAKNRGIKGYSKLRKSELLELIRSS* 215
>TAIR9_protein||AT4G18740.1 | Symbols: | transcription termination factor |
chr4:10303543-10304479 REVERSE
Length = 246
Score = 175 bits (443), Expect = 7e-044
Identities = 114/208 (54%), Positives = 135/208 (64%), Gaps = 18/208 (8%)
Frame = +3
Query: 72 MDLALH----FPSLIKQGFTR---ANHLPVRDSLSTSFG----QSFSRTAFDGDRRSWPG 218
MDLALH +P LIK GF R ANHL VRD+ S F QS SRT +GDR W
Sbjct: 1 MDLALHCHCAYP-LIKLGFMRAKSANHLHVRDTHSLPFALRFEQSLSRTTINGDRSIWFQ 59
Query: 219 EKAWWSSSLTRRSKKGSVVCCKNPSDEQSSDSSKSKQEEIIALLSRIQASISKGESQGA- 395
EK S + RSKKG VCCK PSD ++S+ SKS QEEII+LL RIQ+SISKGES+G
Sbjct: 60 EKGGSSYTSMGRSKKG-CVCCKKPSDRRTSNPSKSNQEEIISLLKRIQSSISKGESRGVE 118
Query: 396 DEKNSNDSCGNGSLSKAILDVLEKPREKTEGDAGLRKEPPKRQV--ARPPFSFAKRAPTR 569
+EKNS++S L+KAILDVLEK R+KTEGD ++++PPKRQV RPP SF KR P
Sbjct: 119 EEKNSDESSKEKPLTKAILDVLEKSRKKTEGDTSVKEKPPKRQVELPRPPSSFVKRTPLS 178
Query: 570 PSASDPRELKEVAKNRGLKGYSKLKKSE 653
SAS PR V+ + K KL K E
Sbjct: 179 SSASGPRGKLPVSNSD--KALGKLTKKE 204
Score = 54 bits (129), Expect = 2e-007
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = +3
Query: 591 ELKEVAKNRGLKGYSKLKKSEILELLRSS* 680
ELKEVAKNRG+KGYSKL+KSE+LEL+RSS*
Sbjct: 217 ELKEVAKNRGIKGYSKLRKSELLELIRSS* 246
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,794,778,008
Number of Sequences: 33410
Number of Extensions: 9794778008
Number of Successful Extensions: 327960547
Number of sequences better than 0.0: 0
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