BLASTX 7.6.2
Query= UN18883 /QuerySize=1837
(1836 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|11094805|gb|AAG29734.1|AC084414_2 signal recognition particle... 571 2e-160
gi|18402407|ref|NP_564535.1| signal recognition particle subunit... 571 2e-160
gi|515681|gb|AAA66200.1| signal recognition particle 54 kDa subu... 569 1e-159
gi|297852530|ref|XP_002894146.1| signal recognition particle 54 ... 565 1e-158
gi|255553241|ref|XP_002517663.1| signal recognition particle 54 ... 543 6e-152
gi|224059270|ref|XP_002299799.1| predicted protein [Populus tric... 537 4e-150
gi|118487996|gb|ABK95819.1| unknown [Populus trichocarpa] 534 3e-149
gi|225442910|ref|XP_002264159.1| PREDICTED: hypothetical protein... 529 7e-148
gi|1711512|sp|P49972.1|SR542_SOLLC RecName: Full=Signal recognit... 525 2e-146
gi|15239909|ref|NP_199761.1| Signal recognition particle SRP54 s... 525 2e-146
gi|242054557|ref|XP_002456424.1| hypothetical protein SORBIDRAFT... 515 1e-143
gi|115440231|ref|NP_001044395.1| Os01g0772800 [Oryza sativa Japo... 514 2e-143
gi|226496107|ref|NP_001142208.1| hypothetical protein LOC1002743... 513 5e-143
gi|218189132|gb|EEC71559.1| hypothetical protein OsI_03915 [Oryz... 511 2e-142
gi|515679|gb|AAA66199.1| signal recognition particle 54 kDa subu... 507 5e-141
gi|308080100|ref|NP_001183903.1| hypothetical protein LOC1005024... 504 2e-140
gi|1711511|sp|P49969.1|SR542_HORVU RecName: Full=Signal recognit... 485 1e-134
gi|1711508|sp|P49968.1|SR541_HORVU RecName: Full=Signal recognit... 485 1e-134
gi|168008842|ref|XP_001757115.1| predicted protein [Physcomitrel... 440 5e-121
gi|227202754|dbj|BAH56850.1| AT1G48900 [Arabidopsis thaliana] 429 9e-118
>gi|11094805|gb|AAG29734.1|AC084414_2 signal recognition particle 54 kDa protein
2 (SRP54), putative [Arabidopsis thaliana]
Length = 522
Score = 571 bits (1470), Expect = 2e-160
Identities = 286/298 (95%), Positives = 294/298 (98%)
Frame = +2
Query: 743 KQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK 922
KQEA+LFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK
Sbjct: 223 KQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK 282
Query: 923 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQDVVPKDQ 1102
GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQ+VVPKDQ
Sbjct: 283 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQEVVPKDQ 342
Query: 1103 QPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEVFSMLPGAAAQMMPKGHEKESQAKIKR 1282
QPELLEKLSQGNFTLRIMYDQFQN+LNMGPL EVFSMLPG +A+MMPKGHEKESQAKIKR
Sbjct: 343 QPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEMMPKGHEKESQAKIKR 402
Query: 1283 YMTMMDSMTNEELDSSNPKMFNESRMMRIARGSGRMVREVMEMLEEYKRLAKMWSKMKGL 1462
YMTMMDSMTN+ELDSSNPK+FNESRMMRIARGSGR VREVMEMLEEYKRLAK+WSKMKGL
Sbjct: 403 YMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGL 462
Query: 1463 KIPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGGMGGLQSLMKQMGSGKDMMGMFGGG 1636
KIPKNGDMSALSRNMNAQHMSKVLPPQMLKQ GGMGGLQSLMKQMGSGKDMMGMFGGG
Sbjct: 463 KIPKNGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQMGSGKDMMGMFGGG 520
>gi|18402407|ref|NP_564535.1| signal recognition particle subunit SRP54
[Arabidopsis thaliana]
Length = 495
Score = 571 bits (1470), Expect = 2e-160
Identities = 286/298 (95%), Positives = 294/298 (98%)
Frame = +2
Query: 743 KQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK 922
KQEA+LFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK
Sbjct: 196 KQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK 255
Query: 923 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQDVVPKDQ 1102
GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQ+VVPKDQ
Sbjct: 256 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQEVVPKDQ 315
Query: 1103 QPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEVFSMLPGAAAQMMPKGHEKESQAKIKR 1282
QPELLEKLSQGNFTLRIMYDQFQN+LNMGPL EVFSMLPG +A+MMPKGHEKESQAKIKR
Sbjct: 316 QPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEMMPKGHEKESQAKIKR 375
Query: 1283 YMTMMDSMTNEELDSSNPKMFNESRMMRIARGSGRMVREVMEMLEEYKRLAKMWSKMKGL 1462
YMTMMDSMTN+ELDSSNPK+FNESRMMRIARGSGR VREVMEMLEEYKRLAK+WSKMKGL
Sbjct: 376 YMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGL 435
Query: 1463 KIPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGGMGGLQSLMKQMGSGKDMMGMFGGG 1636
KIPKNGDMSALSRNMNAQHMSKVLPPQMLKQ GGMGGLQSLMKQMGSGKDMMGMFGGG
Sbjct: 436 KIPKNGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQMGSGKDMMGMFGGG 493
>gi|515681|gb|AAA66200.1| signal recognition particle 54 kDa subunit
[Arabidopsis thaliana]
Length = 495
Score = 569 bits (1464), Expect = 1e-159
Identities = 285/298 (95%), Positives = 293/298 (98%)
Frame = +2
Query: 743 KQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK 922
KQEA+LFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK
Sbjct: 196 KQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK 255
Query: 923 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQDVVPKDQ 1102
GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQ+VVPKDQ
Sbjct: 256 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQEVVPKDQ 315
Query: 1103 QPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEVFSMLPGAAAQMMPKGHEKESQAKIKR 1282
QPELLEKLSQGNFTLRIMYDQFQN+LNMGPL EVFSMLPG +A+MMPKGHEKESQAKIKR
Sbjct: 316 QPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEMMPKGHEKESQAKIKR 375
Query: 1283 YMTMMDSMTNEELDSSNPKMFNESRMMRIARGSGRMVREVMEMLEEYKRLAKMWSKMKGL 1462
YMTMMDSMTN+ELDSS PK+FNESRMMRIARGSGR VREVMEMLEEYKRLAK+WSKMKGL
Sbjct: 376 YMTMMDSMTNDELDSSGPKVFNESRMMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGL 435
Query: 1463 KIPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGGMGGLQSLMKQMGSGKDMMGMFGGG 1636
KIPKNGDMSALSRNMNAQHMSKVLPPQMLKQ GGMGGLQSLMKQMGSGKDMMGMFGGG
Sbjct: 436 KIPKNGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQMGSGKDMMGMFGGG 493
>gi|297852530|ref|XP_002894146.1| signal recognition particle 54 kDa protein 3
[Arabidopsis lyrata subsp. lyrata]
Length = 496
Score = 565 bits (1455), Expect = 1e-158
Identities = 286/299 (95%), Positives = 293/299 (97%), Gaps = 1/299 (0%)
Frame = +2
Query: 743 KQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK 922
KQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK
Sbjct: 196 KQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK 255
Query: 923 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQDVVPKDQ 1102
GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQ+VVPKDQ
Sbjct: 256 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQEVVPKDQ 315
Query: 1103 QPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEVFSMLPGAAAQMMPKGHEKESQAKIKR 1282
QPELLEKLSQGNFTLRIMYD FQN+LNMGPL EVFSMLPG +A+MMPKGHEKESQAKIKR
Sbjct: 316 QPELLEKLSQGNFTLRIMYDLFQNILNMGPLKEVFSMLPGISAEMMPKGHEKESQAKIKR 375
Query: 1283 YMTMMDSMTNEELDSSNPKMFNESRMMRIARGSGRMVREVMEMLEEYKR-LAKMWSKMKG 1459
YMTMMDSMTN+ELDSSNPK+FNESRMMRIARGSGR VREVMEMLEEYKR LAK+WSKMKG
Sbjct: 376 YMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEMLEEYKRLLAKIWSKMKG 435
Query: 1460 LKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGGMGGLQSLMKQMGSGKDMMGMFGGG 1636
LKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQ GGMGGLQSLMKQMGSGKDMMGMFGGG
Sbjct: 436 LKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQMGSGKDMMGMFGGG 494
>gi|255553241|ref|XP_002517663.1| signal recognition particle 54 kD protein,
putative [Ricinus communis]
Length = 497
Score = 543 bits (1397), Expect = 6e-152
Identities = 271/327 (82%), Positives = 301/327 (92%), Gaps = 1/327 (0%)
Frame = +2
Query: 668 KLLLRELIRLRKKTVILLLL-TPVVDKQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAA 844
K+ + + R +K+ L+++ T KQEA LFEEMRQV+EATKPDLVIFVMDSSIGQAA
Sbjct: 170 KIAVEGVERFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAA 229
Query: 845 FDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 1024
FDQAQAFKQSVAVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP
Sbjct: 230 FDQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 289
Query: 1025 FVSRLLGMGDWSGFVDKLQDVVPKDQQPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEV 1204
FVSRLLGMGDWSGF+DK+ +VVP DQQPELL+KLS+GNFTLRIMY+QFQN+L MGP+ +V
Sbjct: 290 FVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQV 349
Query: 1205 FSMLPGAAAQMMPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKMFNESRMMRIARGSG 1384
FSMLPG +A++MPKG EKESQAKIKRYMTMMDSMTNEELDSSNPK+ N+SR+MRIARGSG
Sbjct: 350 FSMLPGFSAELMPKGREKESQAKIKRYMTMMDSMTNEELDSSNPKLMNDSRIMRIARGSG 409
Query: 1385 RMVREVMEMLEEYKRLAKMWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGG 1564
R VREVMEM EEYKRLAK+WSKMKGLKIPK G+MSALSRNMNAQHMSKVLPPQMLKQ GG
Sbjct: 410 RQVREVMEMFEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGG 469
Query: 1565 MGGLQSLMKQMGSGKDMMGMFGGGKDK 1645
MGGLQ+LMKQMGS KDMMGMFGGG++K
Sbjct: 470 MGGLQNLMKQMGSAKDMMGMFGGGENK 496
>gi|224059270|ref|XP_002299799.1| predicted protein [Populus trichocarpa]
Length = 493
Score = 537 bits (1381), Expect = 4e-150
Identities = 263/298 (88%), Positives = 286/298 (95%)
Frame = +2
Query: 743 KQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK 922
KQEA LFEEMRQV+EATKPDL+IFVMDSSIGQAAFDQAQAFKQ VAVGAVIITKMDGHAK
Sbjct: 196 KQEAALFEEMRQVSEATKPDLIIFVMDSSIGQAAFDQAQAFKQMVAVGAVIITKMDGHAK 255
Query: 923 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQDVVPKDQ 1102
GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGF+DK+ +VVP DQ
Sbjct: 256 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQ 315
Query: 1103 QPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEVFSMLPGAAAQMMPKGHEKESQAKIKR 1282
QPELL+KLS+GNFTLRIMY+QFQNLL MGP+ +VFSMLPG +A++MPKGHEKESQAKIKR
Sbjct: 316 QPELLQKLSEGNFTLRIMYEQFQNLLKMGPIGQVFSMLPGFSAELMPKGHEKESQAKIKR 375
Query: 1283 YMTMMDSMTNEELDSSNPKMFNESRMMRIARGSGRMVREVMEMLEEYKRLAKMWSKMKGL 1462
YMTMMDSMTNEELDSSNPK+ N+SRMMRIARG+GR +R+VME+LEEYKRLAK+WSKMKGL
Sbjct: 376 YMTMMDSMTNEELDSSNPKLLNDSRMMRIARGAGRPIRDVMEILEEYKRLAKVWSKMKGL 435
Query: 1463 KIPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGGMGGLQSLMKQMGSGKDMMGMFGGG 1636
KIPK G+MS+LSRNMNAQHMSKVLPPQMLKQ GGMGGLQ+LMKQMGS KDMMGMFGGG
Sbjct: 436 KIPKKGEMSSLSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQMGSAKDMMGMFGGG 493
>gi|118487996|gb|ABK95819.1| unknown [Populus trichocarpa]
Length = 495
Score = 534 bits (1374), Expect = 3e-149
Identities = 262/298 (87%), Positives = 284/298 (95%)
Frame = +2
Query: 743 KQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK 922
KQEA L EEMRQV+EATKPDL+IFVMDSSIGQA FDQAQAFKQ VAVGAVIITKMDGHAK
Sbjct: 196 KQEAALLEEMRQVSEATKPDLIIFVMDSSIGQAPFDQAQAFKQMVAVGAVIITKMDGHAK 255
Query: 923 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQDVVPKDQ 1102
GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGF+DK+ +VVP DQ
Sbjct: 256 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQ 315
Query: 1103 QPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEVFSMLPGAAAQMMPKGHEKESQAKIKR 1282
QPELL+KLS+GNFTLRIMY+QFQNLL MGP+ +VFSMLPG +A++MPKGHEKESQAKIKR
Sbjct: 316 QPELLQKLSEGNFTLRIMYEQFQNLLKMGPIGQVFSMLPGFSAELMPKGHEKESQAKIKR 375
Query: 1283 YMTMMDSMTNEELDSSNPKMFNESRMMRIARGSGRMVREVMEMLEEYKRLAKMWSKMKGL 1462
YMTMMDSMTNEELDSSNPK+ N+SRMMRIARG+GR +R+VMEMLEEYKRLAK+WSKMKGL
Sbjct: 376 YMTMMDSMTNEELDSSNPKLLNDSRMMRIARGAGRPIRDVMEMLEEYKRLAKVWSKMKGL 435
Query: 1463 KIPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGGMGGLQSLMKQMGSGKDMMGMFGGG 1636
KIPK G+MS+LSRNMNAQHMSKVLPPQMLKQ GGMGGLQ+LMKQMGS KDMMGMFGGG
Sbjct: 436 KIPKKGEMSSLSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQMGSAKDMMGMFGGG 493
>gi|225442910|ref|XP_002264159.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 495
Score = 529 bits (1362), Expect = 7e-148
Identities = 263/324 (81%), Positives = 297/324 (91%), Gaps = 1/324 (0%)
Frame = +2
Query: 668 KLLLRELIRLRKKTVILLLL-TPVVDKQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAA 844
K+ + + R +K+ L+++ T KQEA LFEEMRQV+EAT+PDLVIFVMDSSIGQAA
Sbjct: 170 KIAVEGVERFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATRPDLVIFVMDSSIGQAA 229
Query: 845 FDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 1024
FDQAQAF+QSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP
Sbjct: 230 FDQAQAFRQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 289
Query: 1025 FVSRLLGMGDWSGFVDKLQDVVPKDQQPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEV 1204
FVSRLLGMGDWSGF+DK+ +VVP DQQPELL+KLS+GNFTLRIMY+QFQN+L MGP+ +V
Sbjct: 290 FVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPIGQV 349
Query: 1205 FSMLPGAAAQMMPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKMFNESRMMRIARGSG 1384
FSMLPG +A++MPKG EKESQAKIKRYMTMMDSMTNEELD+SNPK+ NESR+MRIARGSG
Sbjct: 350 FSMLPGFSAELMPKGREKESQAKIKRYMTMMDSMTNEELDTSNPKLMNESRIMRIARGSG 409
Query: 1385 RMVREVMEMLEEYKRLAKMWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGG 1564
R VREVMEMLEEYKRLAK+WSKMKGLKIPK G+MSALSRNMNAQHMSK++P QMLKQ GG
Sbjct: 410 RQVREVMEMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKIIPQQMLKQIGG 469
Query: 1565 MGGLQSLMKQMGSGKDMMGMFGGG 1636
MG LQ+LMKQ+G+ KDM+GMFGGG
Sbjct: 470 MGALQNLMKQVGNNKDMLGMFGGG 493
>gi|1711512|sp|P49972.1|SR542_SOLLC RecName: Full=Signal recognition particle 54
kDa protein 2; Short=SRP54
Length = 499
Score = 525 bits (1350), Expect = 2e-146
Identities = 261/302 (86%), Positives = 283/302 (93%), Gaps = 4/302 (1%)
Frame = +2
Query: 743 KQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK 922
KQEA LFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVI+TKMDGHAK
Sbjct: 196 KQEAALFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIVTKMDGHAK 255
Query: 923 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQDVVPKDQ 1102
GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGF+DK+ +VVP DQ
Sbjct: 256 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQ 315
Query: 1103 QPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEVFSMLPGAAAQMMPKGHEKESQAKIKR 1282
QPELL+KLS+G+FTLRIMY+QFQN+L MGP+ +VFSMLPG +A++MPKG E ESQAKIKR
Sbjct: 316 QPELLQKLSEGHFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAELMPKGRENESQAKIKR 375
Query: 1283 YMTMMDSMTNEELDSSNPKMFNESRMMRIARGSGRMVREVMEMLEEYKRLAKMWSKMKGL 1462
YMTMMDSMTNEELDSSNPK+ +SR+MRIARGSGR V EVM+M+EEYKRLAK+WSKMKGL
Sbjct: 376 YMTMMDSMTNEELDSSNPKLMTDSRIMRIARGSGRQVHEVMDMMEEYKRLAKIWSKMKGL 435
Query: 1463 KIPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGGMGGLQSLMKQMGSGKDMM----GMFG 1630
KIPK G+MSALSRNMNAQHMSKVLPPQMLKQ GGMGGLQ+LMKQMGS KDMM GMFG
Sbjct: 436 KIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQMGSAKDMMGGMGGMFG 495
Query: 1631 GG 1636
GG
Sbjct: 496 GG 497
>gi|15239909|ref|NP_199761.1| Signal recognition particle SRP54 subunit protein
[Arabidopsis thaliana]
Length = 497
Score = 525 bits (1350), Expect = 2e-146
Identities = 280/403 (69%), Positives = 325/403 (80%), Gaps = 7/403 (1%)
Frame = +2
Query: 440 FRPRRL--NLVLLCSLDYKVLVKRQRVPNMLIIIRRK--VTNLLWCVPILSGLVLLISSN 607
F P++ ++V+ L +VL K Q VP+MLIIIRRK L+ +G + N
Sbjct: 94 FAPKKAKPSVVMFVGLQGEVLEKPQLVPSMLIIIRRKGYKPALVCADTFRAGAFDQLKQN 153
Query: 608 RMLPRLGFPFMEATRNPIL*KLLLRELIRLRKKTVILLLL-TPVVDKQEATLFEEMRQVA 784
++ + +P+ K+ + + R +K+ L+++ T KQ+A+LFEEMRQ++
Sbjct: 154 ATKSKIPYYGSYTGSDPV--KIAVEGVDRFKKENCDLIIVDTSGRHKQQASLFEEMRQIS 211
Query: 785 EATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSP 964
EATKPDLVIFVMDSSIGQ AF+QA+AFKQ+VAVGAVIITKMDGHAKGGG LSAVAATKSP
Sbjct: 212 EATKPDLVIFVMDSSIGQTAFEQARAFKQTVAVGAVIITKMDGHAKGGGTLSAVAATKSP 271
Query: 965 VIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQDVVPKDQQPELLEKLSQGNFT 1144
VIFIGTGEHMDEFEVFD KPFVSRLLG GD SGFV+KLQ+VVPKDQQPELLE LS G FT
Sbjct: 272 VIFIGTGEHMDEFEVFDAKPFVSRLLGNGDMSGFVNKLQEVVPKDQQPELLEMLSHGKFT 331
Query: 1145 LRIMYDQFQNLLNMGPLSEVFSMLPGAAAQMMPKGHEKESQAKIKRYMTMMDSMTNEELD 1324
LRIMYDQFQN+LNMGPL EVFSMLPG A+MMP+GHEKESQAKIKRYMTMMDSMTNEELD
Sbjct: 332 LRIMYDQFQNMLNMGPLKEVFSMLPGMRAEMMPEGHEKESQAKIKRYMTMMDSMTNEELD 391
Query: 1325 SSNPKMFNESRMMRIARGSGRMVREVMEMLEEYKRLAKMWSKMKGLKIPKNGDMSALSRN 1504
SSNPK+FNESR+MRIARGSGR+VREVMEMLEEYKRL MW K+KGLK + G+MSALS+N
Sbjct: 392 SSNPKVFNESRIMRIARGSGRIVREVMEMLEEYKRLTTMWGKVKGLKNLEKGNMSALSKN 451
Query: 1505 MNAQHMSKVLPPQMLKQFGGMGGLQSLMKQMGSGKDMMGMFGG 1633
N+Q +SKVLP QMLKQ GGM GLQSLMKQMGSGKD+MGMFGG
Sbjct: 452 KNSQQLSKVLPAQMLKQIGGMSGLQSLMKQMGSGKDLMGMFGG 494
>gi|242054557|ref|XP_002456424.1| hypothetical protein SORBIDRAFT_03g036030
[Sorghum bicolor]
Length = 496
Score = 515 bits (1326), Expect = 1e-143
Identities = 259/323 (80%), Positives = 293/323 (90%), Gaps = 2/323 (0%)
Frame = +2
Query: 668 KLLLRELIRLRKKTVILLLL-TPVVDKQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAA 844
K+ + + R +K+ L+++ T KQEA LFEEMRQV+EATKPDLVIFVMDSSIGQAA
Sbjct: 170 KIAVEGVERFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAA 229
Query: 845 FDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 1024
FDQAQAFKQSV+VGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEH+DEFEVFDVKP
Sbjct: 230 FDQAQAFKQSVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEVFDVKP 289
Query: 1025 FVSRLLGMGDWSGFVDKLQDVVPKDQQPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEV 1204
FVSRLLGMGDWSGF+DK+ +VVP DQQPELL+KLS+G+FTLR+MY+QFQN+L MGP+ +V
Sbjct: 290 FVSRLLGMGDWSGFMDKIHEVVPTDQQPELLQKLSEGSFTLRLMYEQFQNILKMGPIGQV 349
Query: 1205 FSMLPGAAAQMMPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKMFNESRMMRIARGSG 1384
FSMLPG +A++MPKGHEKESQAKIKRYMTMMDSMT ELDS+NPK+ ESR++RIARGSG
Sbjct: 350 FSMLPGFSAELMPKGHEKESQAKIKRYMTMMDSMTEAELDSTNPKLMTESRIIRIARGSG 409
Query: 1385 RMVREVMEMLEEYKRLAKMWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGG 1564
R VR+VM+MLEEYKRLAK+W KMKGLKIPK G+MSALSRNMN QHMSKVLPPQMLKQ GG
Sbjct: 410 RPVRDVMDMLEEYKRLAKIWGKMKGLKIPKKGEMSALSRNMNVQHMSKVLPPQMLKQIGG 469
Query: 1565 MGGLQSLMKQMGSGKDMMGMFGG 1633
MGGLQSLMKQMGS K+M GMFGG
Sbjct: 470 MGGLQSLMKQMGS-KEMSGMFGG 491
>gi|115440231|ref|NP_001044395.1| Os01g0772800 [Oryza sativa Japonica Group]
Length = 496
Score = 514 bits (1323), Expect = 2e-143
Identities = 260/328 (79%), Positives = 297/328 (90%), Gaps = 3/328 (0%)
Frame = +2
Query: 668 KLLLRELIRLRKKTVILLLL-TPVVDKQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAA 844
K+ + + R +K+ L+++ T KQEA LFEEMRQV+EATKPDLVIFVMDSSIGQAA
Sbjct: 170 KIAVEGVERFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAA 229
Query: 845 FDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 1024
FDQAQAFKQSV+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEH+DEFEVFDVKP
Sbjct: 230 FDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEVFDVKP 289
Query: 1025 FVSRLLGMGDWSGFVDKLQDVVPKDQQPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEV 1204
FVSRLLGMGDWSGF+DK+ +VVP DQQPELL+KLS+G FTLR+MY+QFQN+L MGP+ +V
Sbjct: 290 FVSRLLGMGDWSGFMDKIHEVVPTDQQPELLQKLSEGTFTLRLMYEQFQNILKMGPIGQV 349
Query: 1205 FSMLPGAAAQMMPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKMFNESRMMRIARGSG 1384
FSMLPG ++++MPKGHEKESQAKIKRYMTMMDSMT+ ELDS+NPK+ ESR++RIARGSG
Sbjct: 350 FSMLPGFSSELMPKGHEKESQAKIKRYMTMMDSMTDGELDSTNPKLMTESRILRIARGSG 409
Query: 1385 RMVREVMEMLEEYKRLAKMWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGG 1564
R VR+V++MLEEYKRLAK+WSKMKGLKIPK G+MSALSRNMN QHMSKVLPPQMLKQ GG
Sbjct: 410 RPVRDVVDMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNVQHMSKVLPPQMLKQIGG 469
Query: 1565 MGGLQSLMKQMGSGKDMMGMFGG-GKDK 1645
MGGLQSLMKQMGS K+M GMFGG G DK
Sbjct: 470 MGGLQSLMKQMGS-KEMGGMFGGMGGDK 496
>gi|226496107|ref|NP_001142208.1| hypothetical protein LOC100274376 [Zea mays]
Length = 496
Score = 513 bits (1320), Expect = 5e-143
Identities = 257/323 (79%), Positives = 294/323 (91%), Gaps = 2/323 (0%)
Frame = +2
Query: 668 KLLLRELIRLRKKTVILLLL-TPVVDKQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAA 844
K+ + + R +K+ L+++ T KQEA LFEEMRQV+EATKPDLVIFVMDSSIGQAA
Sbjct: 170 KIAVEGVERFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAA 229
Query: 845 FDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 1024
FDQAQAFKQSV+VGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEH+DEFEVFDVKP
Sbjct: 230 FDQAQAFKQSVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEVFDVKP 289
Query: 1025 FVSRLLGMGDWSGFVDKLQDVVPKDQQPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEV 1204
FVSRLLGMGDW+GF+DK+ +VVP DQQPELL+KLS+G+FTLR+MY+QFQN+L MGP+ +V
Sbjct: 290 FVSRLLGMGDWAGFMDKIHEVVPTDQQPELLQKLSEGSFTLRLMYEQFQNILKMGPIGQV 349
Query: 1205 FSMLPGAAAQMMPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKMFNESRMMRIARGSG 1384
FSMLPG +A++MPKGHEKESQAKIKRYMTMMDSMT+ ELDS+NPK+ ESR++RIARGSG
Sbjct: 350 FSMLPGFSAELMPKGHEKESQAKIKRYMTMMDSMTDAELDSTNPKLMTESRIIRIARGSG 409
Query: 1385 RMVREVMEMLEEYKRLAKMWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGG 1564
R VR+V++MLEEYKRLAK+W KMKGLKIPK G+MSALSRNMN QHMSKVLPPQMLKQ GG
Sbjct: 410 RPVRDVIDMLEEYKRLAKIWGKMKGLKIPKKGEMSALSRNMNVQHMSKVLPPQMLKQIGG 469
Query: 1565 MGGLQSLMKQMGSGKDMMGMFGG 1633
MGGLQSLMKQMGS K+M GMFGG
Sbjct: 470 MGGLQSLMKQMGS-KEMSGMFGG 491
>gi|218189132|gb|EEC71559.1| hypothetical protein OsI_03915 [Oryza sativa Indica
Group]
Length = 496
Score = 511 bits (1315), Expect = 2e-142
Identities = 259/328 (78%), Positives = 296/328 (90%), Gaps = 3/328 (0%)
Frame = +2
Query: 668 KLLLRELIRLRKKTVILLLL-TPVVDKQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAA 844
K+ + + R +K+ L+++ T KQEA LFEEMRQV+EATKPDLVIFVMDSSIGQAA
Sbjct: 170 KIAVEGVERFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAA 229
Query: 845 FDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 1024
FDQAQAFKQSV+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGE +DEFEVFDVKP
Sbjct: 230 FDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGERIDEFEVFDVKP 289
Query: 1025 FVSRLLGMGDWSGFVDKLQDVVPKDQQPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEV 1204
FVSRLLGMGDWSGF+DK+ +VVP DQQPELL+KLS+G FTLR+MY+QFQN+L MGP+ +V
Sbjct: 290 FVSRLLGMGDWSGFMDKIHEVVPTDQQPELLQKLSEGTFTLRLMYEQFQNILKMGPIGQV 349
Query: 1205 FSMLPGAAAQMMPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKMFNESRMMRIARGSG 1384
FSMLPG ++++MPKGHEKESQAKIKRYMTMMDSMT+ ELDS+NPK+ ESR++RIARGSG
Sbjct: 350 FSMLPGFSSELMPKGHEKESQAKIKRYMTMMDSMTDGELDSTNPKLMTESRILRIARGSG 409
Query: 1385 RMVREVMEMLEEYKRLAKMWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGG 1564
R VR+V++MLEEYKRLAK+WSKMKGLKIPK G+MSALSRNMN QHMSKVLPPQMLKQ GG
Sbjct: 410 RPVRDVVDMLEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNVQHMSKVLPPQMLKQIGG 469
Query: 1565 MGGLQSLMKQMGSGKDMMGMFGG-GKDK 1645
MGGLQSLMKQMGS K+M GMFGG G DK
Sbjct: 470 MGGLQSLMKQMGS-KEMGGMFGGMGGDK 496
>gi|515679|gb|AAA66199.1| signal recognition particle 54 kDa subunit
[Arabidopsis thaliana]
Length = 495
Score = 507 bits (1303), Expect = 5e-141
Identities = 257/323 (79%), Positives = 288/323 (89%), Gaps = 1/323 (0%)
Frame = +2
Query: 668 KLLLRELIRLRKKTVILLLL-TPVVDKQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAA 844
K+ + + R +K+ L+++ T KQ+A+LFEEMRQ++EATKPDLVIFVMDSSIGQ A
Sbjct: 170 KIAVEGVDRFKKENCDLIIVDTSGRHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTA 229
Query: 845 FDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 1024
F+QA+AFKQ+VAVGAVIITKMDGHAKGGG LSAVAATKSPVIFIGTGEHMDEFEVFD KP
Sbjct: 230 FEQARAFKQTVAVGAVIITKMDGHAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKP 289
Query: 1025 FVSRLLGMGDWSGFVDKLQDVVPKDQQPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEV 1204
FVSRLLG GD SGFV+KLQ+VVPKDQQPELLE LS G FTLRIMYDQFQN+LNMGPL EV
Sbjct: 290 FVSRLLGNGDMSGFVNKLQEVVPKDQQPELLEMLSHGKFTLRIMYDQFQNMLNMGPLKEV 349
Query: 1205 FSMLPGAAAQMMPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKMFNESRMMRIARGSG 1384
FSMLPG A+MMP+GHEKESQA+IKRYMTMMDSMTNEELDSSNPK+FNESR+MRIARGSG
Sbjct: 350 FSMLPGMRAEMMPEGHEKESQAEIKRYMTMMDSMTNEELDSSNPKVFNESRIMRIARGSG 409
Query: 1385 RMVREVMEMLEEYKRLAKMWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGG 1564
R+VREVMEMLEEYKRL MW K+KGLK + G+MSALS+N N+Q +SKVLP QMLKQ GG
Sbjct: 410 RIVREVMEMLEEYKRLTTMWGKVKGLKNLEKGNMSALSKNKNSQQLSKVLPAQMLKQIGG 469
Query: 1565 MGGLQSLMKQMGSGKDMMGMFGG 1633
M GLQSLMKQMGSGKD+MGMFGG
Sbjct: 470 MSGLQSLMKQMGSGKDLMGMFGG 492
>gi|308080100|ref|NP_001183903.1| hypothetical protein LOC100502496 [Zea mays]
Length = 494
Score = 504 bits (1297), Expect = 2e-140
Identities = 252/323 (78%), Positives = 291/323 (90%), Gaps = 2/323 (0%)
Frame = +2
Query: 668 KLLLRELIRLRKKTVILLLL-TPVVDKQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAA 844
K+ + + R +K+ L+++ T KQEA LFEEMRQV+EATKPDLVIFVMDSSIGQAA
Sbjct: 170 KIAVEGVERFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAA 229
Query: 845 FDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 1024
FDQAQAFKQSV+VGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEH+D+FEVFDVKP
Sbjct: 230 FDQAQAFKQSVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDDFEVFDVKP 289
Query: 1025 FVSRLLGMGDWSGFVDKLQDVVPKDQQPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEV 1204
FVSRLLGMGDWSGF+DK+ +V+P DQQP+LL+KLS+G+F+LR+MY+QFQNLL MGP+ +V
Sbjct: 290 FVSRLLGMGDWSGFMDKIHEVIPTDQQPDLLQKLSEGSFSLRLMYEQFQNLLKMGPIGQV 349
Query: 1205 FSMLPGAAAQMMPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKMFNESRMMRIARGSG 1384
FSMLPG +A++MPKGHEKESQAKIKRYMTMMDSMT+ ELDS+NPK+ ESR++RIARGSG
Sbjct: 350 FSMLPGFSAELMPKGHEKESQAKIKRYMTMMDSMTDAELDSTNPKLMTESRIIRIARGSG 409
Query: 1385 RMVREVMEMLEEYKRLAKMWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGG 1564
R VR+VM+MLEEYKRLAK+W KMKGLK+ K GDMSAL+RNMN Q MSK LPPQMLKQ GG
Sbjct: 410 RPVRDVMDMLEEYKRLAKIWGKMKGLKLQKKGDMSALTRNMNVQQMSKALPPQMLKQIGG 469
Query: 1565 MGGLQSLMKQMGSGKDMMGMFGG 1633
MGGLQSLMKQMGS K+M GMFGG
Sbjct: 470 MGGLQSLMKQMGS-KEMSGMFGG 491
>gi|1711511|sp|P49969.1|SR542_HORVU RecName: Full=Signal recognition particle 54
kDa protein 2; Short=SRP54
Length = 497
Score = 485 bits (1248), Expect = 1e-134
Identities = 244/323 (75%), Positives = 282/323 (87%), Gaps = 2/323 (0%)
Frame = +2
Query: 668 KLLLRELIRLRKKTVILLLL-TPVVDKQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAA 844
K+ + L R RK+ L+++ T KQEA LFEEMRQVAEATKPDLVIFVMD SIGQAA
Sbjct: 170 KIAVEGLERFRKENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAA 229
Query: 845 FDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 1024
FDQAQAFKQS +VGAVIITK+DGHAKGGGALSAVAATKSPVIFIGTGEH+DEFE+FDVKP
Sbjct: 230 FDQAQAFKQSASVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKP 289
Query: 1025 FVSRLLGMGDWSGFVDKLQDVVPKDQQPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEV 1204
FVSRLLGMGD SG +DK+QDV+P DQQPELL KL++G FTLR++Y+QFQNLL MGP+ +V
Sbjct: 290 FVSRLLGMGDLSGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYEQFQNLLKMGPIGQV 349
Query: 1205 FSMLPGAAAQMMPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKMFNESRMMRIARGSG 1384
FSMLPG ++++MPKGHEKE QAKIKRYMT+MDSMT ELDS+NPK+ ESR++RIARGSG
Sbjct: 350 FSMLPGFSSELMPKGHEKEGQAKIKRYMTIMDSMTAAELDSTNPKLMTESRIIRIARGSG 409
Query: 1385 RMVREVMEMLEEYKRLAKMWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGG 1564
R +R+V +MLEEYKRLAKMWSKMKGLK+PKNG MS LS+N+N Q M+K LPPQ+LKQ GG
Sbjct: 410 RQIRDVTDMLEEYKRLAKMWSKMKGLKMPKNGKMSDLSQNLNIQQMTKALPPQVLKQMGG 469
Query: 1565 MGGLQSLMKQMGSGKDMMGMFGG 1633
MGGLQ+LMKQMG GKDM M GG
Sbjct: 470 MGGLQALMKQMG-GKDMSKMLGG 491
>gi|1711508|sp|P49968.1|SR541_HORVU RecName: Full=Signal recognition particle 54
kDa protein 1; Short=SRP54
Length = 497
Score = 485 bits (1248), Expect = 1e-134
Identities = 244/323 (75%), Positives = 282/323 (87%), Gaps = 2/323 (0%)
Frame = +2
Query: 668 KLLLRELIRLRKKTVILLLL-TPVVDKQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAA 844
K+ + L R RK+ L+++ T KQEA LFEEMRQVAEATKPDLVIFVMD SIGQAA
Sbjct: 170 KIAVEGLERFRKENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAA 229
Query: 845 FDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 1024
FDQAQAFKQS +VGAVIITK+DGHAKGGGALSAVAATKSPVIFIGTGEH+DEFE+FDVKP
Sbjct: 230 FDQAQAFKQSASVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKP 289
Query: 1025 FVSRLLGMGDWSGFVDKLQDVVPKDQQPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEV 1204
FVSRLLGMGD SG +DK+QDV+P DQQPELL KL++G FTLR++Y+QFQNLL MGP+ +V
Sbjct: 290 FVSRLLGMGDLSGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYEQFQNLLKMGPIGQV 349
Query: 1205 FSMLPGAAAQMMPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKMFNESRMMRIARGSG 1384
FSMLPG ++++MPKGHEKE QAKIKRYMT+MDSMT ELDS+NPK+ ESR++RIARGSG
Sbjct: 350 FSMLPGFSSELMPKGHEKEGQAKIKRYMTIMDSMTAAELDSTNPKLMTESRIIRIARGSG 409
Query: 1385 RMVREVMEMLEEYKRLAKMWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGG 1564
R +R+V +MLEEYKRLAKMWSKMKGLK+PKNG MS LS+N+N Q M+K LPPQ+LKQ GG
Sbjct: 410 RQIRDVTDMLEEYKRLAKMWSKMKGLKMPKNGKMSDLSQNLNIQQMTKALPPQVLKQMGG 469
Query: 1565 MGGLQSLMKQMGSGKDMMGMFGG 1633
MGGLQ+LMKQMG GKDM M GG
Sbjct: 470 MGGLQALMKQMG-GKDMSKMLGG 491
>gi|168008842|ref|XP_001757115.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 281
Score = 440 bits (1130), Expect = 5e-121
Identities = 216/266 (81%), Positives = 243/266 (91%), Gaps = 1/266 (0%)
Frame = +2
Query: 839 AAFDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDV 1018
AAFDQAQAFKQSVAVGAVI+TKMDGHAKGGGALSAVAATKSP+IFIGTGEHMDEFE F+
Sbjct: 11 AAFDQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPIIFIGTGEHMDEFEAFET 70
Query: 1019 KPFVSRLLGMGDWSGFVDKLQDVVPKDQQPELLEKLSQGNFTLRIMYDQFQNLLNMGPLS 1198
K FVSRLLGMGDWSGF++K+QD VP DQQPELL+KLS+GNFTLRIMY+QFQN+L MGPLS
Sbjct: 71 KTFVSRLLGMGDWSGFMEKIQDAVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKMGPLS 130
Query: 1199 EVFSMLPGAAAQMMPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKMFNESRMMRIARG 1378
+V SM+PG + + MPKG EKESQAKIK++ TMMDSMT+EELDS+NPK+ +SR+ RIARG
Sbjct: 131 QVMSMIPGFSQEFMPKGREKESQAKIKKFTTMMDSMTDEELDSTNPKLMTDSRIYRIARG 190
Query: 1379 SGRMVREVMEMLEEYKRLAKMWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQF 1558
SGR +REV EMLEE+KRLAK+WSKMKGLKIPK GDMSA+SRNMNAQHMSKVLPPQMLKQ
Sbjct: 191 SGRGLREVHEMLEEFKRLAKIWSKMKGLKIPKKGDMSAMSRNMNAQHMSKVLPPQMLKQI 250
Query: 1559 GGMGGLQSLMKQMGSGKDMMGMFGGG 1636
GG+GGLQSLMKQM S K+ GMFGGG
Sbjct: 251 GGIGGLQSLMKQMNS-KEFSGMFGGG 275
>gi|227202754|dbj|BAH56850.1| AT1G48900 [Arabidopsis thaliana]
Length = 450
Score = 429 bits (1102), Expect = 9e-118
Identities = 217/238 (91%), Positives = 228/238 (95%)
Frame = +2
Query: 743 KQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK 922
KQEA+LFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK
Sbjct: 196 KQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK 255
Query: 923 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQDVVPKDQ 1102
GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQ+VVPKDQ
Sbjct: 256 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQEVVPKDQ 315
Query: 1103 QPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEVFSMLPGAAAQMMPKGHEKESQAKIKR 1282
QPELLEKLSQGNFTLRIMYDQFQN+LNMGPL EVFSMLPG +A+MMPKGHEKESQAKIKR
Sbjct: 316 QPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEMMPKGHEKESQAKIKR 375
Query: 1283 YMTMMDSMTNEELDSSNPKMFNESRMMRIARGSGRMVREVMEMLEEYKRLAKMWSKMK 1456
YMTMMDSMTN+ELDSSNPK+FNESRMMRIARGSGR VREVMEML++ + + S MK
Sbjct: 376 YMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEMLKQIGGMGGLQSLMK 433
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,252,929,668,096
Number of Sequences: 15229318
Number of Extensions: 2252929668096
Number of Successful Extensions: 564714463
Number of sequences better than 0.0: 0
|
