BLASTX 7.6.2
Query= UN18883 /QuerySize=1837
(1836 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P49967|SR543_ARATH Signal recognition particle 54 kDa protein... 571 8e-162
sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein... 525 7e-148
sp|P49971|SR541_SOLLC Signal recognition particle 54 kDa protein... 507 1e-142
sp|P49966|SR542_ARATH Signal recognition particle 54 kDa protein... 507 2e-142
sp|P49968|SR541_HORVU Signal recognition particle 54 kDa protein... 485 5e-136
sp|P49969|SR542_HORVU Signal recognition particle 54 kDa protein... 485 5e-136
sp|P49970|SR543_HORVU Signal recognition particle 54 kDa protein... 420 2e-116
sp|P37106|SR541_ARATH Signal recognition particle 54 kDa protein... 407 2e-112
sp|Q2T9U1|SRP54_BOVIN Signal recognition particle 54 kDa protein... 262 8e-069
sp|P61010|SRP54_CANFA Signal recognition particle 54 kDa protein... 262 8e-069
sp|P61011|SRP54_HUMAN Signal recognition particle 54 kDa protein... 262 8e-069
sp|Q4R965|SRP54_MACFA Signal recognition particle 54 kDa protein... 262 8e-069
>sp|P49967|SR543_ARATH Signal recognition particle 54 kDa protein 3
OS=Arabidopsis thaliana GN=SRP-54C PE=2 SV=2
Length = 495
Score = 571 bits (1470), Expect = 8e-162
Identities = 286/298 (95%), Positives = 294/298 (98%)
Frame = +2
Query: 743 KQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK 922
KQEA+LFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK
Sbjct: 196 KQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK 255
Query: 923 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQDVVPKDQ 1102
GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQ+VVPKDQ
Sbjct: 256 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQEVVPKDQ 315
Query: 1103 QPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEVFSMLPGAAAQMMPKGHEKESQAKIKR 1282
QPELLEKLSQGNFTLRIMYDQFQN+LNMGPL EVFSMLPG +A+MMPKGHEKESQAKIKR
Sbjct: 316 QPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEMMPKGHEKESQAKIKR 375
Query: 1283 YMTMMDSMTNEELDSSNPKMFNESRMMRIARGSGRMVREVMEMLEEYKRLAKMWSKMKGL 1462
YMTMMDSMTN+ELDSSNPK+FNESRMMRIARGSGR VREVMEMLEEYKRLAK+WSKMKGL
Sbjct: 376 YMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGL 435
Query: 1463 KIPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGGMGGLQSLMKQMGSGKDMMGMFGGG 1636
KIPKNGDMSALSRNMNAQHMSKVLPPQMLKQ GGMGGLQSLMKQMGSGKDMMGMFGGG
Sbjct: 436 KIPKNGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQMGSGKDMMGMFGGG 493
Score = 367 bits (942), Expect = 1e-100
Identities = 183/201 (91%), Positives = 192/201 (95%)
Frame = +1
Query: 160 MVLAELGGQIASALQKMSNVTIIDEKALNECLKEITRALLHSDVSFPLVREMQNNIKKIV 339
MVLAELGG+I A+Q+MSNVTIIDEKALNECL EITRALL SDVSFPLV+EMQ+NIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60
Query: 340 NLEELAAGHNKRRIIEQAIFSELCKMLDPGKPAFSPKKAKPSVVMFVGLQGAGKTTTCTK 519
NLE+LAAGHNKRRIIEQAIFSELCKMLDPGKPAF+PKKAK SVVMFVGLQGAGKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120
Query: 520 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVKIAVEGVDTFK 699
YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPVKIAVEGVDTFK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180
Query: 700 KENCDLIIVDTSGRQTRSYSL 762
KENCDLIIVDTSGR + SL
Sbjct: 181 KENCDLIIVDTSGRHKQEASL 201
>sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2 OS=Solanum
lycopersicum PE=2 SV=1
Length = 499
Score = 525 bits (1350), Expect = 7e-148
Identities = 261/302 (86%), Positives = 283/302 (93%), Gaps = 4/302 (1%)
Frame = +2
Query: 743 KQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK 922
KQEA LFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVI+TKMDGHAK
Sbjct: 196 KQEAALFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIVTKMDGHAK 255
Query: 923 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQDVVPKDQ 1102
GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGF+DK+ +VVP DQ
Sbjct: 256 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQ 315
Query: 1103 QPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEVFSMLPGAAAQMMPKGHEKESQAKIKR 1282
QPELL+KLS+G+FTLRIMY+QFQN+L MGP+ +VFSMLPG +A++MPKG E ESQAKIKR
Sbjct: 316 QPELLQKLSEGHFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAELMPKGRENESQAKIKR 375
Query: 1283 YMTMMDSMTNEELDSSNPKMFNESRMMRIARGSGRMVREVMEMLEEYKRLAKMWSKMKGL 1462
YMTMMDSMTNEELDSSNPK+ +SR+MRIARGSGR V EVM+M+EEYKRLAK+WSKMKGL
Sbjct: 376 YMTMMDSMTNEELDSSNPKLMTDSRIMRIARGSGRQVHEVMDMMEEYKRLAKIWSKMKGL 435
Query: 1463 KIPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGGMGGLQSLMKQMGSGKDMM----GMFG 1630
KIPK G+MSALSRNMNAQHMSKVLPPQMLKQ GGMGGLQ+LMKQMGS KDMM GMFG
Sbjct: 436 KIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQMGSAKDMMGGMGGMFG 495
Query: 1631 GG 1636
GG
Sbjct: 496 GG 497
Score = 344 bits (882), Expect = 1e-093
Identities = 166/201 (82%), Positives = 186/201 (92%)
Frame = +1
Query: 160 MVLAELGGQIASALQKMSNVTIIDEKALNECLKEITRALLHSDVSFPLVREMQNNIKKIV 339
MVLAELGG I+ ALQ+MSN TIIDEK LNECL EITRALL +DV F LVR+M NIKKIV
Sbjct: 1 MVLAELGGSISRALQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVRDMTTNIKKIV 60
Query: 340 NLEELAAGHNKRRIIEQAIFSELCKMLDPGKPAFSPKKAKPSVVMFVGLQGAGKTTTCTK 519
NL++LAAGHNKRRII+QA+F+ELCK+LDPGKP+F+PKK KPS+VMFVGLQG+GKTTTCTK
Sbjct: 61 NLDDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKPSIVMFVGLQGSGKTTTCTK 120
Query: 520 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVKIAVEGVDTFK 699
YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPVKIAV+GV+TFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVDGVETFK 180
Query: 700 KENCDLIIVDTSGRQTRSYSL 762
KENCDLIIVDTSGR + +L
Sbjct: 181 KENCDLIIVDTSGRHKQEAAL 201
>sp|P49971|SR541_SOLLC Signal recognition particle 54 kDa protein 1 OS=Solanum
lycopersicum PE=3 SV=1
Length = 496
Score = 507 bits (1304), Expect = 1e-142
Identities = 256/298 (85%), Positives = 280/298 (93%), Gaps = 1/298 (0%)
Frame = +2
Query: 743 KQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK 922
KQEA LFEEMRQV+EA KPDLVIFVMDSSIGQAAFDQAQAF+QSVAVGAVI+TKMDGHAK
Sbjct: 197 KQEAALFEEMRQVSEAQKPDLVIFVMDSSIGQAAFDQAQAFRQSVAVGAVIVTKMDGHAK 256
Query: 923 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQDVVPKDQ 1102
GGGALS VAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD SG V+K+QDVVP DQ
Sbjct: 257 GGGALSRVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGLVNKIQDVVPMDQ 316
Query: 1103 QPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEVFSMLPGAAAQMMPKGHEKESQAKIKR 1282
QPELL+KLS+G+FTLRIMY+QFQ++L MGPL VFSMLPG +A+MMP+G EKESQAK KR
Sbjct: 317 QPELLQKLSEGHFTLRIMYEQFQSMLKMGPLG-VFSMLPGFSAEMMPQGREKESQAKFKR 375
Query: 1283 YMTMMDSMTNEELDSSNPKMFNESRMMRIARGSGRMVREVMEMLEEYKRLAKMWSKMKGL 1462
YMTMMDSMT+EELDS+NPK+ ESR+MRIARGSGR+V EVMEMLEEYKRLAK++SKMKGL
Sbjct: 376 YMTMMDSMTDEELDSTNPKILTESRIMRIARGSGRLVHEVMEMLEEYKRLAKIFSKMKGL 435
Query: 1463 KIPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGGMGGLQSLMKQMGSGKDMMGMFGGG 1636
KIPK GDMS+LSRNMNAQ+MSKVLPPQMLKQ GGMGGLQ+LMKQMGS KDMMGMFGGG
Sbjct: 436 KIPKKGDMSSLSRNMNAQNMSKVLPPQMLKQIGGMGGLQNLMKQMGSAKDMMGMFGGG 493
Score = 334 bits (854), Expect = 2e-090
Identities = 164/202 (81%), Positives = 185/202 (91%), Gaps = 1/202 (0%)
Frame = +1
Query: 160 MVLAELGGQIASALQKMSNVTIIDEKALNECLKEITRALLHSDVSFPLVREMQNNIKKIV 339
MVLA+LGG I+ ALQ+MSN TIIDEK LNECL EITRALL +DV F LVR+M NIKKIV
Sbjct: 1 MVLAQLGGSISRALQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVRDMSTNIKKIV 60
Query: 340 NLEELAAGHNKRRIIEQAIFSELCKMLDPGKPAFSPKKAKPSVVMFVGLQGAGKTTTCTK 519
NLE+LAAGHNKRRII+QA+++ELCK+LDPGKPAF+ KK KPSVVMFVGLQG+GKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIQQAVYNELCKILDPGKPAFTLKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 520 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKARIPFYG-SYTESDPVKIAVEGVDTF 696
YAY+HQK+G+KPALVCADTFRAGAFDQLKQNATKA+IPFYG SYTESDPVKIAV+GV+TF
Sbjct: 121 YAYHHQKRGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSSYTESDPVKIAVDGVETF 180
Query: 697 KKENCDLIIVDTSGRQTRSYSL 762
KKENCDLIIVDTSGR + +L
Sbjct: 181 KKENCDLIIVDTSGRHKQEAAL 202
>sp|P49966|SR542_ARATH Signal recognition particle 54 kDa protein 2
OS=Arabidopsis thaliana GN=SRP-54B PE=2 SV=1
Length = 495
Score = 507 bits (1303), Expect = 2e-142
Identities = 257/323 (79%), Positives = 288/323 (89%), Gaps = 1/323 (0%)
Frame = +2
Query: 668 KLLLRELIRLRKKTVILLLL-TPVVDKQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAA 844
K+ + + R +K+ L+++ T KQ+A+LFEEMRQ++EATKPDLVIFVMDSSIGQ A
Sbjct: 170 KIAVEGVDRFKKENCDLIIVDTSGRHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTA 229
Query: 845 FDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 1024
F+QA+AFKQ+VAVGAVIITKMDGHAKGGG LSAVAATKSPVIFIGTGEHMDEFEVFD KP
Sbjct: 230 FEQARAFKQTVAVGAVIITKMDGHAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKP 289
Query: 1025 FVSRLLGMGDWSGFVDKLQDVVPKDQQPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEV 1204
FVSRLLG GD SGFV+KLQ+VVPKDQQPELLE LS G FTLRIMYDQFQN+LNMGPL EV
Sbjct: 290 FVSRLLGNGDMSGFVNKLQEVVPKDQQPELLEMLSHGKFTLRIMYDQFQNMLNMGPLKEV 349
Query: 1205 FSMLPGAAAQMMPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKMFNESRMMRIARGSG 1384
FSMLPG A+MMP+GHEKESQA+IKRYMTMMDSMTNEELDSSNPK+FNESR+MRIARGSG
Sbjct: 350 FSMLPGMRAEMMPEGHEKESQAEIKRYMTMMDSMTNEELDSSNPKVFNESRIMRIARGSG 409
Query: 1385 RMVREVMEMLEEYKRLAKMWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGG 1564
R+VREVMEMLEEYKRL MW K+KGLK + G+MSALS+N N+Q +SKVLP QMLKQ GG
Sbjct: 410 RIVREVMEMLEEYKRLTTMWGKVKGLKNLEKGNMSALSKNKNSQQLSKVLPAQMLKQIGG 469
Query: 1565 MGGLQSLMKQMGSGKDMMGMFGG 1633
M GLQSLMKQMGSGKD+MGMFGG
Sbjct: 470 MSGLQSLMKQMGSGKDLMGMFGG 492
Score = 357 bits (916), Expect = 1e-097
Identities = 177/201 (88%), Positives = 189/201 (94%)
Frame = +1
Query: 160 MVLAELGGQIASALQKMSNVTIIDEKALNECLKEITRALLHSDVSFPLVREMQNNIKKIV 339
MVLAELGG+I SA+QKM+NVTIIDEKALN+CL EITRALL SDVSFPLV+EMQ NIKKIV
Sbjct: 1 MVLAELGGRIMSAIQKMNNVTIIDEKALNDCLNEITRALLQSDVSFPLVKEMQTNIKKIV 60
Query: 340 NLEELAAGHNKRRIIEQAIFSELCKMLDPGKPAFSPKKAKPSVVMFVGLQGAGKTTTCTK 519
NLE+LAAGHNKRRIIEQAIFSELCKMLDPGK AF+PKKAKP VVMFVGLQG+GKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKSAFAPKKAKPRVVMFVGLQGSGKTTTCTK 120
Query: 520 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVKIAVEGVDTFK 699
YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATK++IP+YGSYT SDPVKIAVEGVD FK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVEGVDRFK 180
Query: 700 KENCDLIIVDTSGRQTRSYSL 762
KENCDLIIVDTSGR + SL
Sbjct: 181 KENCDLIIVDTSGRHKQQASL 201
>sp|P49968|SR541_HORVU Signal recognition particle 54 kDa protein 1 OS=Hordeum
vulgare GN=SRP54-1 PE=2 SV=1
Length = 497
Score = 485 bits (1248), Expect = 5e-136
Identities = 244/323 (75%), Positives = 282/323 (87%), Gaps = 2/323 (0%)
Frame = +2
Query: 668 KLLLRELIRLRKKTVILLLL-TPVVDKQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAA 844
K+ + L R RK+ L+++ T KQEA LFEEMRQVAEATKPDLVIFVMD SIGQAA
Sbjct: 170 KIAVEGLERFRKENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAA 229
Query: 845 FDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 1024
FDQAQAFKQS +VGAVIITK+DGHAKGGGALSAVAATKSPVIFIGTGEH+DEFE+FDVKP
Sbjct: 230 FDQAQAFKQSASVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKP 289
Query: 1025 FVSRLLGMGDWSGFVDKLQDVVPKDQQPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEV 1204
FVSRLLGMGD SG +DK+QDV+P DQQPELL KL++G FTLR++Y+QFQNLL MGP+ +V
Sbjct: 290 FVSRLLGMGDLSGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYEQFQNLLKMGPIGQV 349
Query: 1205 FSMLPGAAAQMMPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKMFNESRMMRIARGSG 1384
FSMLPG ++++MPKGHEKE QAKIKRYMT+MDSMT ELDS+NPK+ ESR++RIARGSG
Sbjct: 350 FSMLPGFSSELMPKGHEKEGQAKIKRYMTIMDSMTAAELDSTNPKLMTESRIIRIARGSG 409
Query: 1385 RMVREVMEMLEEYKRLAKMWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGG 1564
R +R+V +MLEEYKRLAKMWSKMKGLK+PKNG MS LS+N+N Q M+K LPPQ+LKQ GG
Sbjct: 410 RQIRDVTDMLEEYKRLAKMWSKMKGLKMPKNGKMSDLSQNLNIQQMTKALPPQVLKQMGG 469
Query: 1565 MGGLQSLMKQMGSGKDMMGMFGG 1633
MGGLQ+LMKQMG GKDM M GG
Sbjct: 470 MGGLQALMKQMG-GKDMSKMLGG 491
Score = 320 bits (820), Expect = 2e-086
Identities = 155/201 (77%), Positives = 178/201 (88%)
Frame = +1
Query: 160 MVLAELGGQIASALQKMSNVTIIDEKALNECLKEITRALLHSDVSFPLVREMQNNIKKIV 339
MVLA+LGG I+ AL +MSN T+IDEK L ECL EI+RALL SDV F +VR+MQ NI+KIV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIV 60
Query: 340 NLEELAAGHNKRRIIEQAIFSELCKMLDPGKPAFSPKKAKPSVVMFVGLQGAGKTTTCTK 519
NLE LAAG NKRRII+QA+F+ELC MLDPGKPAF+ KK KPSVVMFVGLQG+GKTTTCTK
Sbjct: 61 NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPAFTTKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 520 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVKIAVEGVDTFK 699
YAYYHQ+KG+KP+LVCADTFRAGAFDQLKQNATKA+IPFYGSY ESDPVKIAVEG++ F+
Sbjct: 121 YAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFR 180
Query: 700 KENCDLIIVDTSGRQTRSYSL 762
KEN DLII+DTSGR + +L
Sbjct: 181 KENSDLIIIDTSGRHKQEAAL 201
>sp|P49969|SR542_HORVU Signal recognition particle 54 kDa protein 2 OS=Hordeum
vulgare GN=SRP54-2 PE=2 SV=1
Length = 497
Score = 485 bits (1248), Expect = 5e-136
Identities = 244/323 (75%), Positives = 282/323 (87%), Gaps = 2/323 (0%)
Frame = +2
Query: 668 KLLLRELIRLRKKTVILLLL-TPVVDKQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAA 844
K+ + L R RK+ L+++ T KQEA LFEEMRQVAEATKPDLVIFVMD SIGQAA
Sbjct: 170 KIAVEGLERFRKENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAA 229
Query: 845 FDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 1024
FDQAQAFKQS +VGAVIITK+DGHAKGGGALSAVAATKSPVIFIGTGEH+DEFE+FDVKP
Sbjct: 230 FDQAQAFKQSASVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKP 289
Query: 1025 FVSRLLGMGDWSGFVDKLQDVVPKDQQPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEV 1204
FVSRLLGMGD SG +DK+QDV+P DQQPELL KL++G FTLR++Y+QFQNLL MGP+ +V
Sbjct: 290 FVSRLLGMGDLSGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYEQFQNLLKMGPIGQV 349
Query: 1205 FSMLPGAAAQMMPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKMFNESRMMRIARGSG 1384
FSMLPG ++++MPKGHEKE QAKIKRYMT+MDSMT ELDS+NPK+ ESR++RIARGSG
Sbjct: 350 FSMLPGFSSELMPKGHEKEGQAKIKRYMTIMDSMTAAELDSTNPKLMTESRIIRIARGSG 409
Query: 1385 RMVREVMEMLEEYKRLAKMWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGG 1564
R +R+V +MLEEYKRLAKMWSKMKGLK+PKNG MS LS+N+N Q M+K LPPQ+LKQ GG
Sbjct: 410 RQIRDVTDMLEEYKRLAKMWSKMKGLKMPKNGKMSDLSQNLNIQQMTKALPPQVLKQMGG 469
Query: 1565 MGGLQSLMKQMGSGKDMMGMFGG 1633
MGGLQ+LMKQMG GKDM M GG
Sbjct: 470 MGGLQALMKQMG-GKDMSKMLGG 491
Score = 324 bits (828), Expect = 2e-087
Identities = 156/201 (77%), Positives = 179/201 (89%)
Frame = +1
Query: 160 MVLAELGGQIASALQKMSNVTIIDEKALNECLKEITRALLHSDVSFPLVREMQNNIKKIV 339
MVLA+LGG I+ AL +MSN T+IDEK L ECL EI+RALL SDV F +VR+MQ NI+KIV
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIV 60
Query: 340 NLEELAAGHNKRRIIEQAIFSELCKMLDPGKPAFSPKKAKPSVVMFVGLQGAGKTTTCTK 519
NLE LAAG NKRRII+QA+F+ELC MLDPGKPAF+PKK KPSVVMFVGLQG+GKTTTCTK
Sbjct: 61 NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPAFTPKKGKPSVVMFVGLQGSGKTTTCTK 120
Query: 520 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVKIAVEGVDTFK 699
YAYYHQ+KG+KP+LVCADTFRAGAFDQLKQNATKA+IPFYGSY ESDPVKIAVEG++ F+
Sbjct: 121 YAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFR 180
Query: 700 KENCDLIIVDTSGRQTRSYSL 762
KEN DLII+DTSGR + +L
Sbjct: 181 KENSDLIIIDTSGRHKQEAAL 201
>sp|P49970|SR543_HORVU Signal recognition particle 54 kDa protein 3 OS=Hordeum
vulgare GN=SRP54-3 PE=2 SV=1
Length = 493
Score = 420 bits (1078), Expect = 2e-116
Identities = 209/313 (66%), Positives = 261/313 (83%), Gaps = 5/313 (1%)
Frame = +2
Query: 698 RKKTVILLLLTPVVDKQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 877
++K+ ++++ T QEA LFEEMRQVAEATKPDLVIFVMD SIGQAAFDQAQAFKQS
Sbjct: 180 QEKSDLIIIDTSGRHMQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 239
Query: 878 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 1057
+VGAVI+TK+DGHAKGGGALSAVAATKSPVIFIGTGEH+D+F+VF+V+PFV+RLLG GD
Sbjct: 240 SVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDDFDVFNVEPFVARLLGRGDL 299
Query: 1058 SGFVDKLQDVVPKDQQPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEVFSMLPGAAAQM 1237
G +DK++ +VP DQQ EL+ KLS+G FTLR++Y+QFQNLL MGP+S++FSMLPG ++++
Sbjct: 300 PGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQFQNLLKMGPMSQIFSMLPGFSSEL 359
Query: 1238 MPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKMFNESRMMRIARGSGRMVREVMEMLE 1417
MPKG EK+S+ K KRYMT+MDSMT ELDS+NPK+ ESR++R+ARGSGR V++VMEMLE
Sbjct: 360 MPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKLMTESRIIRVARGSGRKVKDVMEMLE 419
Query: 1418 EYKRLAKMWSKMKGLK-IPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGGMGGLQSLMKQ 1594
EYKRLAKMWSK K IP+NG MSA + Q M KV+PPQ+++Q GG GL++L+KQ
Sbjct: 420 EYKRLAKMWSKRNVSKLIPQNGKMSAQA----IQKMLKVMPPQVVQQMGGKSGLEALLKQ 475
Query: 1595 MGSGKDMMGMFGG 1633
+G GKD M G
Sbjct: 476 LGGGKDTSKMLAG 488
Score = 284 bits (726), Expect = 2e-075
Identities = 140/200 (70%), Positives = 166/200 (83%), Gaps = 1/200 (0%)
Frame = +1
Query: 163 VLAELGGQIASALQKMSNVTIIDEKALNECLKEITRALLHSDVSFPLVREMQNNIKKIVN 342
VLA++GG I+ AL MS+ ++DE L ECL EI RAL+ SDV F V ++Q NI+K VN
Sbjct: 2 VLADVGGSISRAL-AMSSAAVVDESVLRECLNEIARALMQSDVRFKTVCDLQANIRKTVN 60
Query: 343 LEELAAGHNKRRIIEQAIFSELCKMLDPGKPAFSPKKAKPSVVMFVGLQGAGKTTTCTKY 522
LE LAAG NKRRIIE ++ ELCKMLD GKPAF PKK KP+VVMFVGLQG+GKTTTCTKY
Sbjct: 61 LEALAAGTNKRRIIETSVGKELCKMLDTGKPAFVPKKGKPNVVMFVGLQGSGKTTTCTKY 120
Query: 523 AYYHQKKGYKPALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVKIAVEGVDTFKK 702
A+YHQ+KG+KP+LVCADTFRAGAFDQLKQNATKA+IPFYGSY ESDPVKIAVEG++ F++
Sbjct: 121 AHYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLEKFRQ 180
Query: 703 ENCDLIIVDTSGRQTRSYSL 762
E DLII+DTSGR + +L
Sbjct: 181 EKSDLIIIDTSGRHMQEAAL 200
>sp|P37106|SR541_ARATH Signal recognition particle 54 kDa protein 1
OS=Arabidopsis thaliana GN=SRP-54A PE=2 SV=1
Length = 479
Score = 407 bits (1044), Expect = 2e-112
Identities = 216/300 (72%), Positives = 253/300 (84%), Gaps = 6/300 (2%)
Frame = +2
Query: 668 KLLLRELIRLRKKTVILLLL-TPVVDKQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAA 844
K+ + + R +K+ L+++ T KQ A+LFEEMRQVAEAT+PDLVIFVMDSSIGQAA
Sbjct: 170 KIAVEGVDRFKKEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAA 229
Query: 845 FDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 1024
F+QA+AFK++V+VGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP
Sbjct: 230 FEQAEAFKETVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 289
Query: 1025 FVSRLLGMGDWSGFVDKLQDVVPKDQQPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEV 1204
FVSRLLG GDWSG VDKLQ+VVPKD Q EL+E LSQGNFTLR MYDQFQ L + PL+++
Sbjct: 290 FVSRLLGKGDWSGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRI-PLNQL 348
Query: 1205 FSMLPGAAAQMMPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKMFNESRMMRIARGSG 1384
FSMLPG +A+MMPKGH +ES+ K+KRYMTMMDSMTN+ELDS NPK+FNESR+MRIARGSG
Sbjct: 349 FSMLPGISAEMMPKGHGEESRVKMKRYMTMMDSMTNKELDSPNPKIFNESRIMRIARGSG 408
Query: 1385 RMVREVMEMLEEYKRLAKMWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQ-MLKQFG 1561
R+VREVMEMLEEYKR+AK MKG+KIPKNGDMS + + M + Q ++KQ G
Sbjct: 409 RLVREVMEMLEEYKRIAK---TMKGIKIPKNGDMSKVIPPQMLKQMGGMSGLQSLMKQMG 465
Score = 342 bits (877), Expect = 5e-093
Identities = 171/201 (85%), Positives = 184/201 (91%)
Frame = +1
Query: 160 MVLAELGGQIASALQKMSNVTIIDEKALNECLKEITRALLHSDVSFPLVREMQNNIKKIV 339
MVLAELGG+I A+Q+M+NVTIIDEK LN+ L EITRALL SDVSF LV +MQ NIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIV 60
Query: 340 NLEELAAGHNKRRIIEQAIFSELCKMLDPGKPAFSPKKAKPSVVMFVGLQGAGKTTTCTK 519
NL++LAAGHNKR IIEQAIF ELC+MLDPGKPAF+PKKAKPSVVMFVGLQGAGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTK 120
Query: 520 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVKIAVEGVDTFK 699
YAYYHQKKGYK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPVKIAVEGVD FK
Sbjct: 121 YAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFK 180
Query: 700 KENCDLIIVDTSGRQTRSYSL 762
KE CDLIIVDTSGR ++ SL
Sbjct: 181 KEKCDLIIVDTSGRHKQAASL 201
>sp|Q2T9U1|SRP54_BOVIN Signal recognition particle 54 kDa protein OS=Bos taurus
GN=SRP54 PE=2 SV=1
Length = 504
Score = 262 bits (668), Expect = 8e-069
Identities = 126/201 (62%), Positives = 164/201 (81%)
Frame = +1
Query: 160 MVLAELGGQIASALQKMSNVTIIDEKALNECLKEITRALLHSDVSFPLVREMQNNIKKIV 339
MVLA+LG +I SAL+ +SN TII+E+ LN LKE+ ALL +DV+ LV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 340 NLEELAAGHNKRRIIEQAIFSELCKMLDPGKPAFSPKKAKPSVVMFVGLQGAGKTTTCTK 519
+LEE+A+G NKR++I+ A+F EL K++DPG A++P K K +V+MFVGLQG+GKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 520 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVKIAVEGVDTFK 699
AYY+Q+KG+K L+CADTFRAGAFDQLKQNATKARIPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 700 KENCDLIIVDTSGRQTRSYSL 762
EN ++IIVDTSGR + SL
Sbjct: 181 NENFEIIIVDTSGRHKQEDSL 201
>sp|P61010|SRP54_CANFA Signal recognition particle 54 kDa protein OS=Canis
familiaris GN=SRP54 PE=1 SV=1
Length = 504
Score = 262 bits (668), Expect = 8e-069
Identities = 126/201 (62%), Positives = 164/201 (81%)
Frame = +1
Query: 160 MVLAELGGQIASALQKMSNVTIIDEKALNECLKEITRALLHSDVSFPLVREMQNNIKKIV 339
MVLA+LG +I SAL+ +SN TII+E+ LN LKE+ ALL +DV+ LV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 340 NLEELAAGHNKRRIIEQAIFSELCKMLDPGKPAFSPKKAKPSVVMFVGLQGAGKTTTCTK 519
+LEE+A+G NKR++I+ A+F EL K++DPG A++P K K +V+MFVGLQG+GKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 520 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVKIAVEGVDTFK 699
AYY+Q+KG+K L+CADTFRAGAFDQLKQNATKARIPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 700 KENCDLIIVDTSGRQTRSYSL 762
EN ++IIVDTSGR + SL
Sbjct: 181 NENFEIIIVDTSGRHKQEDSL 201
>sp|P61011|SRP54_HUMAN Signal recognition particle 54 kDa protein OS=Homo
sapiens GN=SRP54 PE=1 SV=1
Length = 504
Score = 262 bits (668), Expect = 8e-069
Identities = 126/201 (62%), Positives = 164/201 (81%)
Frame = +1
Query: 160 MVLAELGGQIASALQKMSNVTIIDEKALNECLKEITRALLHSDVSFPLVREMQNNIKKIV 339
MVLA+LG +I SAL+ +SN TII+E+ LN LKE+ ALL +DV+ LV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 340 NLEELAAGHNKRRIIEQAIFSELCKMLDPGKPAFSPKKAKPSVVMFVGLQGAGKTTTCTK 519
+LEE+A+G NKR++I+ A+F EL K++DPG A++P K K +V+MFVGLQG+GKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 520 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVKIAVEGVDTFK 699
AYY+Q+KG+K L+CADTFRAGAFDQLKQNATKARIPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 700 KENCDLIIVDTSGRQTRSYSL 762
EN ++IIVDTSGR + SL
Sbjct: 181 NENFEIIIVDTSGRHKQEDSL 201
>sp|Q4R965|SRP54_MACFA Signal recognition particle 54 kDa protein OS=Macaca
fascicularis GN=SRP54 PE=2 SV=1
Length = 504
Score = 262 bits (668), Expect = 8e-069
Identities = 126/201 (62%), Positives = 164/201 (81%)
Frame = +1
Query: 160 MVLAELGGQIASALQKMSNVTIIDEKALNECLKEITRALLHSDVSFPLVREMQNNIKKIV 339
MVLA+LG +I SAL+ +SN TII+E+ LN LKE+ ALL +DV+ LV++++ N+K +
Sbjct: 1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI 60
Query: 340 NLEELAAGHNKRRIIEQAIFSELCKMLDPGKPAFSPKKAKPSVVMFVGLQGAGKTTTCTK 519
+LEE+A+G NKR++I+ A+F EL K++DPG A++P K K +V+MFVGLQG+GKTTTC+K
Sbjct: 61 DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK 120
Query: 520 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVKIAVEGVDTFK 699
AYY+Q+KG+K L+CADTFRAGAFDQLKQNATKARIPFYGSYTE DPV IA EGV+ FK
Sbjct: 121 LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK 180
Query: 700 KENCDLIIVDTSGRQTRSYSL 762
EN ++IIVDTSGR + SL
Sbjct: 181 NENFEIIIVDTSGRHKQEDSL 201
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,378,909,851
Number of Sequences: 518415
Number of Extensions: 78378909851
Number of Successful Extensions: 523441567
Number of sequences better than 0.0: 0
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