BLASTX 7.6.2
Query= UN18883 /QuerySize=1837
(1836 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G48900.1 | Symbols: | signal recognition part... 571 7e-163
TAIR9_protein||AT5G49500.1 | Symbols: | signal recognition part... 525 6e-149
TAIR9_protein||AT1G48900.2 | Symbols: | signal recognition part... 422 4e-118
TAIR9_protein||AT1G15310.1 | Symbols: ATHSRP54A, SRP54-1 | ATHSR... 410 2e-114
TAIR9_protein||AT5G66970.1 | Symbols: | GTP binding | chr5:2674... 129 9e-030
TAIR9_protein||AT5G03940.1 | Symbols: FFC, 54CP, CPSRP54, SRP54C... 116 6e-026
TAIR9_protein||AT4G30600.1 | Symbols: | signal recognition part... 92 1e-018
TAIR9_protein||AT2G45770.1 | Symbols: CPFTSY, FRD4 | CPFTSY; 7S ... 78 2e-014
>TAIR9_protein||AT1G48900.1 | Symbols: | signal recognition particle 54 kDa
protein 3 / SRP54 (SRP-54C) | chr1:18084972-18087743 REVERSE
Length = 496
Score = 571 bits (1470), Expect = 7e-163
Identities = 286/298 (95%), Positives = 294/298 (98%)
Frame = +2
Query: 743 KQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK 922
KQEA+LFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK
Sbjct: 196 KQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK 255
Query: 923 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQDVVPKDQ 1102
GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQ+VVPKDQ
Sbjct: 256 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQEVVPKDQ 315
Query: 1103 QPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEVFSMLPGAAAQMMPKGHEKESQAKIKR 1282
QPELLEKLSQGNFTLRIMYDQFQN+LNMGPL EVFSMLPG +A+MMPKGHEKESQAKIKR
Sbjct: 316 QPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEMMPKGHEKESQAKIKR 375
Query: 1283 YMTMMDSMTNEELDSSNPKMFNESRMMRIARGSGRMVREVMEMLEEYKRLAKMWSKMKGL 1462
YMTMMDSMTN+ELDSSNPK+FNESRMMRIARGSGR VREVMEMLEEYKRLAK+WSKMKGL
Sbjct: 376 YMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEMLEEYKRLAKIWSKMKGL 435
Query: 1463 KIPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGGMGGLQSLMKQMGSGKDMMGMFGGG 1636
KIPKNGDMSALSRNMNAQHMSKVLPPQMLKQ GGMGGLQSLMKQMGSGKDMMGMFGGG
Sbjct: 436 KIPKNGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQMGSGKDMMGMFGGG 493
Score = 367 bits (942), Expect = 1e-101
Identities = 183/201 (91%), Positives = 192/201 (95%)
Frame = +1
Query: 160 MVLAELGGQIASALQKMSNVTIIDEKALNECLKEITRALLHSDVSFPLVREMQNNIKKIV 339
MVLAELGG+I A+Q+MSNVTIIDEKALNECL EITRALL SDVSFPLV+EMQ+NIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60
Query: 340 NLEELAAGHNKRRIIEQAIFSELCKMLDPGKPAFSPKKAKPSVVMFVGLQGAGKTTTCTK 519
NLE+LAAGHNKRRIIEQAIFSELCKMLDPGKPAF+PKKAK SVVMFVGLQGAGKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120
Query: 520 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVKIAVEGVDTFK 699
YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPVKIAVEGVDTFK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180
Query: 700 KENCDLIIVDTSGRQTRSYSL 762
KENCDLIIVDTSGR + SL
Sbjct: 181 KENCDLIIVDTSGRHKQEASL 201
>TAIR9_protein||AT5G49500.1 | Symbols: | signal recognition particle 54 kDa
protein 2 / SRP54 (SRP-54B) | chr5:20077556-20080206 REVERSE
Length = 498
Score = 525 bits (1350), Expect = 6e-149
Identities = 280/403 (69%), Positives = 325/403 (80%), Gaps = 7/403 (1%)
Frame = +2
Query: 440 FRPRRL--NLVLLCSLDYKVLVKRQRVPNMLIIIRRK--VTNLLWCVPILSGLVLLISSN 607
F P++ ++V+ L +VL K Q VP+MLIIIRRK L+ +G + N
Sbjct: 94 FAPKKAKPSVVMFVGLQGEVLEKPQLVPSMLIIIRRKGYKPALVCADTFRAGAFDQLKQN 153
Query: 608 RMLPRLGFPFMEATRNPIL*KLLLRELIRLRKKTVILLLL-TPVVDKQEATLFEEMRQVA 784
++ + +P+ K+ + + R +K+ L+++ T KQ+A+LFEEMRQ++
Sbjct: 154 ATKSKIPYYGSYTGSDPV--KIAVEGVDRFKKENCDLIIVDTSGRHKQQASLFEEMRQIS 211
Query: 785 EATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSP 964
EATKPDLVIFVMDSSIGQ AF+QA+AFKQ+VAVGAVIITKMDGHAKGGG LSAVAATKSP
Sbjct: 212 EATKPDLVIFVMDSSIGQTAFEQARAFKQTVAVGAVIITKMDGHAKGGGTLSAVAATKSP 271
Query: 965 VIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQDVVPKDQQPELLEKLSQGNFT 1144
VIFIGTGEHMDEFEVFD KPFVSRLLG GD SGFV+KLQ+VVPKDQQPELLE LS G FT
Sbjct: 272 VIFIGTGEHMDEFEVFDAKPFVSRLLGNGDMSGFVNKLQEVVPKDQQPELLEMLSHGKFT 331
Query: 1145 LRIMYDQFQNLLNMGPLSEVFSMLPGAAAQMMPKGHEKESQAKIKRYMTMMDSMTNEELD 1324
LRIMYDQFQN+LNMGPL EVFSMLPG A+MMP+GHEKESQAKIKRYMTMMDSMTNEELD
Sbjct: 332 LRIMYDQFQNMLNMGPLKEVFSMLPGMRAEMMPEGHEKESQAKIKRYMTMMDSMTNEELD 391
Query: 1325 SSNPKMFNESRMMRIARGSGRMVREVMEMLEEYKRLAKMWSKMKGLKIPKNGDMSALSRN 1504
SSNPK+FNESR+MRIARGSGR+VREVMEMLEEYKRL MW K+KGLK + G+MSALS+N
Sbjct: 392 SSNPKVFNESRIMRIARGSGRIVREVMEMLEEYKRLTTMWGKVKGLKNLEKGNMSALSKN 451
Query: 1505 MNAQHMSKVLPPQMLKQFGGMGGLQSLMKQMGSGKDMMGMFGG 1633
N+Q +SKVLP QMLKQ GGM GLQSLMKQMGSGKD+MGMFGG
Sbjct: 452 KNSQQLSKVLPAQMLKQIGGMSGLQSLMKQMGSGKDLMGMFGG 494
Score = 317 bits (812), Expect = 1e-086
Identities = 164/203 (80%), Positives = 177/203 (87%), Gaps = 2/203 (0%)
Frame = +1
Query: 160 MVLAELGGQIASALQKMSNVTIIDEKALNECLKEITRALLHSDVSFPLVREMQNNIKKIV 339
MVLAELGG+I SA+QKM+NVTIIDEKALN+CL EITRALL SDVSFPLV+EMQ NIKKIV
Sbjct: 1 MVLAELGGRIMSAIQKMNNVTIIDEKALNDCLNEITRALLQSDVSFPLVKEMQTNIKKIV 60
Query: 340 NLEELAAGHNKRRIIEQAIFSELCKMLDPGKPAFSPKKAKPSVVMFVGLQG--AGKTTTC 513
NLE+LAAGHNKRRIIEQAIFSELCKMLDPGK AF+PKKAKPSVVMFVGLQG K
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKSAFAPKKAKPSVVMFVGLQGEVLEKPQLV 120
Query: 514 TKYAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVKIAVEGVDT 693
++KGYKPALVCADTFRAGAFDQLKQNATK++IP+YGSYT SDPVKIAVEGVD
Sbjct: 121 PSMLIIIRRKGYKPALVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVEGVDR 180
Query: 694 FKKENCDLIIVDTSGRQTRSYSL 762
FKKENCDLIIVDTSGR + SL
Sbjct: 181 FKKENCDLIIVDTSGRHKQQASL 203
>TAIR9_protein||AT1G48900.2 | Symbols: | signal recognition particle 54 kDa
protein 3 / SRP54 (SRP-54C) | chr1:18085031-18087743 REVERSE
Length = 432
Score = 422 bits (1084), Expect = 4e-118
Identities = 212/223 (95%), Positives = 220/223 (98%)
Frame = +2
Query: 743 KQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK 922
KQEA+LFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK
Sbjct: 196 KQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAK 255
Query: 923 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQDVVPKDQ 1102
GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQ+VVPKDQ
Sbjct: 256 GGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQEVVPKDQ 315
Query: 1103 QPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEVFSMLPGAAAQMMPKGHEKESQAKIKR 1282
QPELLEKLSQGNFTLRIMYDQFQN+LNMGPL EVFSMLPG +A+MMPKGHEKESQAKIKR
Sbjct: 316 QPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEMMPKGHEKESQAKIKR 375
Query: 1283 YMTMMDSMTNEELDSSNPKMFNESRMMRIARGSGRMVREVMEM 1411
YMTMMDSMTN+ELDSSNPK+FNESRMMRIARGSGR VREVME+
Sbjct: 376 YMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEI 418
Score = 367 bits (942), Expect = 1e-101
Identities = 183/201 (91%), Positives = 192/201 (95%)
Frame = +1
Query: 160 MVLAELGGQIASALQKMSNVTIIDEKALNECLKEITRALLHSDVSFPLVREMQNNIKKIV 339
MVLAELGG+I A+Q+MSNVTIIDEKALNECL EITRALL SDVSFPLV+EMQ+NIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60
Query: 340 NLEELAAGHNKRRIIEQAIFSELCKMLDPGKPAFSPKKAKPSVVMFVGLQGAGKTTTCTK 519
NLE+LAAGHNKRRIIEQAIFSELCKMLDPGKPAF+PKKAK SVVMFVGLQGAGKTTTCTK
Sbjct: 61 NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120
Query: 520 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVKIAVEGVDTFK 699
YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPVKIAVEGVDTFK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180
Query: 700 KENCDLIIVDTSGRQTRSYSL 762
KENCDLIIVDTSGR + SL
Sbjct: 181 KENCDLIIVDTSGRHKQEASL 201
>TAIR9_protein||AT1G15310.1 | Symbols: ATHSRP54A, SRP54-1 | ATHSRP54A
(ARABIDOPSIS THALIANA SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT); 7S
RNA binding / GTP binding / mRNA binding / nucleoside-triphosphatase/
nucleotide binding | chr1:5269173-5271947 REVERSE
Length = 480
Score = 410 bits (1052), Expect = 2e-114
Identities = 219/314 (69%), Positives = 257/314 (81%), Gaps = 7/314 (2%)
Frame = +2
Query: 668 KLLLRELIRLRKKTVILLLL-TPVVDKQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAA 844
K+ + + R +K+ L+++ T KQ A+LFEEMRQVAEAT+PDLVIFVMDSSIGQAA
Sbjct: 170 KIAVEGVDRFKKEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAA 229
Query: 845 FDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 1024
F+QA+AFK++V+VGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP
Sbjct: 230 FEQAEAFKETVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 289
Query: 1025 FVSRLLGMGDWSGFVDKLQDVVPKDQQPELLEKLSQGNFTLRIMYDQFQNLLNMGPLSEV 1204
FVSRLLG GDWSG VDKLQ+VVPKD Q EL+E LSQGNFTLR MYDQFQ L + PL+++
Sbjct: 290 FVSRLLGKGDWSGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRI-PLNQL 348
Query: 1205 FSMLPGAAAQMMPKGHEKESQAKIKRYMTMMDSMTNEELDSSNPKMFNESRMMRIARGSG 1384
FSMLPG +A+MMPKGH +ES+ K+KRYMTMMDSMTN+ELDS NPK+FNESR+MRIARGSG
Sbjct: 349 FSMLPGISAEMMPKGHGEESRVKMKRYMTMMDSMTNKELDSPNPKIFNESRIMRIARGSG 408
Query: 1385 RMVREVMEMLEEYKRLAKMWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQFGG 1564
R+VREVMEMLEEYKR+AK MKG+KIPKNGDMS + + M + Q L +
Sbjct: 409 RLVREVMEMLEEYKRIAK---TMKGIKIPKNGDMSKVIPPQMLKQMGGMSGLQSLMK--Q 463
Query: 1565 MGGLQSLMKQMGSG 1606
MG + +M G G
Sbjct: 464 MGSAKDMMGMFGGG 477
Score = 342 bits (877), Expect = 4e-094
Identities = 171/201 (85%), Positives = 184/201 (91%)
Frame = +1
Query: 160 MVLAELGGQIASALQKMSNVTIIDEKALNECLKEITRALLHSDVSFPLVREMQNNIKKIV 339
MVLAELGG+I A+Q+M+NVTIIDEK LN+ L EITRALL SDVSF LV +MQ NIKKIV
Sbjct: 1 MVLAELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIV 60
Query: 340 NLEELAAGHNKRRIIEQAIFSELCKMLDPGKPAFSPKKAKPSVVMFVGLQGAGKTTTCTK 519
NL++LAAGHNKR IIEQAIF ELC+MLDPGKPAF+PKKAKPSVVMFVGLQGAGKTTTCTK
Sbjct: 61 NLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTK 120
Query: 520 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVKIAVEGVDTFK 699
YAYYHQKKGYK ALVCADTFRAGAFDQLKQNATKA+IPFYGSYTESDPVKIAVEGVD FK
Sbjct: 121 YAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFK 180
Query: 700 KENCDLIIVDTSGRQTRSYSL 762
KE CDLIIVDTSGR ++ SL
Sbjct: 181 KEKCDLIIVDTSGRHKQAASL 201
Score = 75 bits (184), Expect = 9e-014
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +2
Query: 1520 MSKVLPPQMLKQFGGMGGLQSLMKQMGSGKDMMGMFGGG 1636
MSKV+PPQMLKQ GGM GLQSLMKQMGS KDMMGMFGGG
Sbjct: 439 MSKVIPPQMLKQMGGMSGLQSLMKQMGSAKDMMGMFGGG 477
>TAIR9_protein||AT5G66970.1 | Symbols: | GTP binding | chr5:26740445-26741125
REVERSE
Length = 176
Score = 129 bits (322), Expect = 9e-030
Identities = 70/161 (43%), Positives = 98/161 (60%), Gaps = 3/161 (1%)
Frame = +1
Query: 166 LAELGGQIASALQKMSNVTIIDEKALNECLKEITRALLHSDVSFPLVREMQNNIKKIVNL 345
L E+ G+I + ++M+ + +D L CL EIT ALL +D+ V E++ +I+NL
Sbjct: 3 LEEVRGRIGRSFEEMNKTSNMDCTKLKSCLNEITCALLDADIPRLAVDEIETKSLEIINL 62
Query: 346 EELAAGHNKRRIIEQAIFSELCKMLDPGKPAFSPKKAKPSVVMFVGLQGAGKTTTCTKYA 525
+ A K +I + EL LDPGK A K +PS+VMF+GL+G KT TC KYA
Sbjct: 63 PK--APKKKGALIYMMMLQELSSKLDPGKSALIRGKLEPSIVMFIGLRGVDKTKTCAKYA 120
Query: 526 YYHQKKGYKPALVCADTFRAGAFDQLKQNATKARIPFYGSY 648
YH+KKG++PALVCADTF+ AF +L + A K +P Y Y
Sbjct: 121 RYHRKKGFRPALVCADTFKFDAFVRLNK-AAKDEVPVYARY 160
>TAIR9_protein||AT5G03940.1 | Symbols: FFC, 54CP, CPSRP54, SRP54CP | CPSRP54
(CHLOROPLAST SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT); 7S RNA
binding / GTP binding / mRNA binding / signal sequence binding |
chr5:1060265-1063257 REVERSE
Length = 565
Score = 116 bits (289), Expect = 6e-026
Identities = 75/264 (28%), Positives = 132/264 (50%), Gaps = 10/264 (3%)
Frame = +2
Query: 758 LFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAKGGGAL 937
+ +E++ V + P V+ V+D+ GQ A F + + I+TK+DG ++GG AL
Sbjct: 276 MMDELKDVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAAL 335
Query: 938 SAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQDVVPKDQQPELL 1117
S + P+ +G GE M++ E F R+LGMGD FV+K +V+ ++ +L
Sbjct: 336 SVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKATEVMRQEDAEDLQ 395
Query: 1118 EKLSQGNFTLRIMYDQFQNLLNMGPLSEVFSMLPGAAAQMMPKGHEKESQAKIKRYMTMM 1297
+K+ F Q + + MG ++ V M+PG + +E++ + M+
Sbjct: 396 KKIMSAKFDFNDFLKQTRAVAKMGSMTRVLGMIPGMG--KVSPAQIREAEKNLLVMEAMI 453
Query: 1298 DSMTNEELDSSNPKMFNES--RMMRIARGSGRMVREVMEMLEEYKRLAKMWSKMKGLK-I 1468
+ MT EE + P++ ES R RIA+ SG+ ++V ++ + + +M KMK L +
Sbjct: 454 EVMTPEERE--RPELLAESPERRKRIAKDSGKTEQQVSALVAQ---IFQMRVKMKNLMGV 508
Query: 1469 PKNGDMSALSRNMNAQHMSKVLPP 1540
+ G + ALS +A + PP
Sbjct: 509 MEGGSIPALSGLEDALKAEQKAPP 532
Score = 110 bits (273), Expect = 5e-024
Identities = 63/197 (31%), Positives = 103/197 (52%), Gaps = 4/197 (2%)
Frame = +1
Query: 163 VLAELGGQIASALQ----KMSNVTIIDEKALNECLKEITRALLHSDVSFPLVREMQNNIK 330
V AE+ GQ+ L+ K+ ++ + + E +++I RALL +DVS P+VR ++
Sbjct: 73 VRAEMFGQLTGGLEAAWSKLKGEEVLTKDNIAEPMRDIRRALLEADVSLPVVRRFVQSVS 132
Query: 331 KIVNLEELAAGHNKRRIIEQAIFSELCKMLDPGKPAFSPKKAKPSVVMFVGLQGAGKTTT 510
+ G + + + + EL K++ K+ P+V++ GLQG GKTT
Sbjct: 133 DQAVGMGVIRGVKPDQQLVKIVHDELVKLMGGEVSELQFAKSGPTVILLAGLQGVGKTTV 192
Query: 511 CTKYAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVKIAVEGVD 690
C K A Y +K+G L+ D +R A DQL + +P Y + T+ P IA +G+
Sbjct: 193 CAKLACYLKKQGKSCMLIAGDVYRPAAIDQLVILGEQVGVPVYTAGTDVKPADIAKQGLK 252
Query: 691 TFKKENCDLIIVDTSGR 741
KK N D++I+DT+GR
Sbjct: 253 EAKKNNVDVVIMDTAGR 269
>TAIR9_protein||AT4G30600.1 | Symbols: | signal recognition particle receptor
alpha subunit family protein | chr4:14938142-14940600 REVERSE
Length = 635
Score = 92 bits (226), Expect = 1e-018
Identities = 56/217 (25%), Positives = 107/217 (49%), Gaps = 7/217 (3%)
Frame = +1
Query: 148 SAAKMVLAELGGQIASALQKMSNVTIIDEKALNECLKEITRALLHSDVSFPLVREMQNNI 327
S K A+ G +S Q ++ ++ L LK + L+ +V+ + ++ ++
Sbjct: 317 SDEKPAQAKKKGWFSSVFQSITGKANLERTDLGPALKALKERLMTKNVAEEIAEKLCESV 376
Query: 328 KKIVNLEELAAGHNKRRIIEQAIFSELCKMLDPGKPA-------FSPKKAKPSVVMFVGL 486
+ + ++L++ ++ A+ L ++L P + + ++ KP VV+FVG+
Sbjct: 377 EASLEGKKLSSFTRISSTVQAAMEDALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGV 436
Query: 487 QGAGKTTTCTKYAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPV 666
G GK+T K AY+ Q+ + DTFR+GA +QL+ +A + +IP + E DP
Sbjct: 437 NGVGKSTNLAKVAYWLQQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 496
Query: 667 KIAVEGVDTFKKENCDLIIVDTSGRQTRSYSL*RNAS 777
+A E + + D+++VDT+GR + L R S
Sbjct: 497 VVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALS 533
>TAIR9_protein||AT2G45770.1 | Symbols: CPFTSY, FRD4 | CPFTSY; 7S RNA binding /
GTP binding / nucleoside-triphosphatase/ nucleotide binding |
chr2:18851248-18853402 FORWARD
Length = 367
Score = 78 bits (190), Expect = 2e-014
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 14/200 (7%)
Frame = +1
Query: 214 NVTIIDEKAL-------NECLKEITRALLHSDVSFPLVREMQNNIKKIVNLEELAAGHNK 372
N+ +IDE L + L E+ ALL SD + + +++ + +L +G
Sbjct: 77 NLAVIDELLLFWNLAETDRVLDELEEALLVSDFGPKITVRIVERLREDIMSGKLKSGSEI 136
Query: 373 RRIIEQAIFSELCKMLDPGKPAFSPKKAKPSVVMFVGLQGAGKTTTCTKYAYYHQKKGYK 552
+ +++++ L K K KP+V+M VG+ G GKTT+ K A+ + +G K
Sbjct: 137 KDALKESVLEMLAK--KNSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAHRLKNEGTK 194
Query: 553 PALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVKIAV---EGVDTFKKENCDLII 723
+ DTFRA A DQL+ A + E D K A + V K+E D+++
Sbjct: 195 VLMAAGDTFRAAASDQLEIWAERTGCEIV--VAEGDKAKAATVLSKAVKRGKEEGYDVVL 252
Query: 724 VDTSGRQTRSYSL*RNASSC 783
DTSGR +YSL +C
Sbjct: 253 CDTSGRLHTNYSLMEELIAC 272
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,794,778,008
Number of Sequences: 33410
Number of Extensions: 9794778008
Number of Successful Extensions: 327960547
Number of sequences better than 0.0: 0
|
